Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 3,067,323 A→T 17.6% intergenic (‑150/+17) ygfI ← / ← yggE putative DNA‑binding transcriptional regulator/oxidative stress defense protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,067,3230AT17.6% 465.7 / 87.1 193intergenic (‑150/+17)ygfI/yggEputative DNA‑binding transcriptional regulator/oxidative stress defense protein
Reads supporting (aligned to +/- strand):  ref base A (78/81);  new base T (14/20);  total (92/101)
Fisher's exact test for biased strand distribution p-value = 4.53e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.80e-01

Only 100 of 197 total aligned reads displayed.

TGATGAAACCGCGAGCAAAGATAGGTGATTACGTCATGGTTTTACAGAAAATTACAGAAAAAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAAGACCACATCGACCTGATCATCAAACTGAA  >  NC_000913/3067224‑3067422
                                                                                                   |                                                                                                   
tgatgaAACCGCGAGCAAAGATAGGTGATTACGTCATGGTTTTACAGAAAATTACAGAAAAAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATa                                                                                                     >  1:533600/1‑100 (MQ=255)
   tgaAACCGCGAGCAAAGATAGGTGATTACGTCATGGTTTTACAGAAAATTACAGAAAAAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGt                                                                                                  >  2:145502/1‑100 (MQ=255)
    gaAACCGCGAGCAAAGATAAGTGATTACCTCATGGTTTTACAGAAAATTACAGAAACAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTc                                                                                                 <  2:1534186/100‑1 (MQ=255)
     aaaCCGCGAGCAAAGATAGGTGATTACGTCATGGTTTTACAGAAAATTACAGAAAAAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCg                                                                                                <  2:2161429/100‑1 (MQ=255)
       aCCGCGAGCAAAGATAGGTGATTACGTCATGGTTTTACAGAAAATTACAGAAAAAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGTATTCGTCggg                                                                                              <  1:103736/100‑1 (MQ=255)
       aCCGCGAGCAAAGATAGGTGATTACGTCATGGTTTTACAGAAAATTACAGAAAAAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGTATTCGTCggg                                                                                              <  1:3656998/100‑1 (MQ=255)
       aCCGCGAGCAAAGATAGGTGATTACGTCATGGTTTTACAGAAAATTACAGAAAAAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGTATTCGTCggg                                                                                              <  2:122538/100‑1 (MQ=255)
       aCCGCGAGCAAAGATAGGTGATTACGTCATGGTTTTACAGAAAATTACAGAAAAAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGTATTCGTCggg                                                                                              <  1:2937807/100‑1 (MQ=255)
       aCCGCGAGCAAAGATAGGTGATTACGTCATGGTTTTACAGAAAATTACAGAAAAAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGTATTCGTCggg                                                                                              <  1:2865649/100‑1 (MQ=255)
       aCCGCGAGCAAAGATAGGTGATTACGTCATGGTTTTACAGAAAATTACAGAAAAAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCggg                                                                                              <  1:3052432/100‑1 (MQ=255)
       aCCGCGAGCAAAGATAGGTGATTACGTCATGGTTTTACAGAAAATTACAGAAAAAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCgg                                                                                               <  1:3190026/99‑1 (MQ=255)
        ccGCGAGCAAAGATAGGTGATTACGTCATGGTTTTACAGAAAATTACAGAAAAAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGTATTCGTCggg                                                                                              <  2:3209810/99‑1 (MQ=255)
        ccGCGAGCAAAGATAGGTGATTACGTCATGGTTTTACAGAAAATTACAGAAAAAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGTATTCGTCGGGc                                                                                             <  1:170807/100‑1 (MQ=255)
        ccGCGAGCAAAGATAGGTGATTACGTCATGGTTTTACAGAAAATTACAGAAAAAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGTATTCGTCGGGc                                                                                             <  1:2490541/100‑1 (MQ=255)
        ccGCGAGCAAAGATAGGTGATTACGTCATGGTTTTACAGAAAATTACAGAAAAAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGc                                                                                             <  1:1967193/100‑1 (MQ=255)
          gcgAGCAAAGATAGGTGATTACGTCATGGTTTTACAGAAAATTACAGAAAAAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTa                                                                                           >  1:2767555/1‑100 (MQ=255)
          gcgAGCAAAGATAGGTGATTACGTCATGGTTTTACAGAAAATTACAGAAAAAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTa                                                                                           >  2:2250470/1‑100 (MQ=255)
            gAGCAAAGATAGGTGATTACGTCATGGTTTTACAGAAAATTACAGAAAAAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGTATTCGTCGGGCTaat                                                                                         <  1:1257854/100‑3 (MQ=255)
            gAGCAAAGATAGGTGATTACGTCATGGTTTTACAGAAAATAACAGAAAAAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACa                                                                                         <  2:3072914/100‑1 (MQ=255)
             aGCAAAGATAGGTGATTACGTCATGGTTTTACAGAAAATTACAGAACAAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGTATTCGTCGGGCTaatg                                                                                        <  2:827079/100‑4 (MQ=38)
             aGCAAAGATAGGTGATTACGTCATGGTTTTACAGAAAATTACAGAAAAAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGTATTCGTCGGGCTaatg                                                                                        <  2:606123/100‑4 (MQ=39)
             aGCAAAGATAGGTGATTACGTCATGGTTTTACAGAAAATTACAGAAAAAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACaa                                                                                        >  2:2477309/1‑100 (MQ=255)
             aGCAAAGATAGGTGATTACGTCATGGTTTTACAGAAAATTACAGAAAAAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACaa                                                                                        >  1:2011862/1‑100 (MQ=255)
                 aaGATAGGTGATTACGTCATGGTTTTACAGAAAATTACAGAAAAAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAatat                                                                                    <  2:540018/100‑1 (MQ=255)
                   gATAGGTGATTACGTCATGGTTTTACAGAAAATTACAGAAAAAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAAtatta                                                                                  >  1:1773556/1‑100 (MQ=255)
                    aTAGGTGATTACGTCATGGTTTTACAGAAAATTACAGAAAAAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAAtattat                                                                                 >  2:2787803/1‑100 (MQ=255)
                     tcggTGATTACGTCATGGTTTTACAGAAAATTACAGAAATAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATattatt                                                                                >  2:3364123/3‑100 (MQ=255)
                     tAGGTGATTACGTCATGGTTTTACAGAAAATTACAGAAAAAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATattatt                                                                                <  1:453564/100‑1 (MQ=255)
                      aGGTGATTACGTCATGGTTTTACAGAAAATTACAGAAAAAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATtg                                                                               <  1:359200/100‑1 (MQ=255)
                       ggTGATTACGTCATGGTTTTACAGAAAATTACAGAAAAAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATtgt                                                                              >  2:1056868/1‑100 (MQ=255)
                       ggTGATTACGTCATGGTTTTACAGAAAATTACAGAAAAAGGAGGCAATATCGGGTAAAGGCATTAGCACGACGAATACGTCGGGCTACAAATATTATtgt                                                                              >  2:2676987/1‑100 (MQ=255)
                       ggTGATTACGTCATGGTTTTACAGAAAATTACAGAAAAAGGAGGCAATATCGGGTAAAAGCATTAGCCCGACGAATACGTAGGGCTACAAATATTATtgt                                                                              >  2:3382295/1‑100 (MQ=255)
                        gTGATTACGTCATGGTTTTACAGAAAATTACAGAAAAAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATtgtg                                                                             <  2:3759555/100‑1 (MQ=255)
                         tGATTACGTCATGGTTTTACAGAAAATTACAGAAAAAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGtgc                                                                            <  2:1590610/100‑1 (MQ=255)
                         tGATTACGTCATGGTTTTACAGAAAATTACAGAAAAAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGtgc                                                                            >  1:2980210/1‑100 (MQ=255)
                           aTTACGTCATGGTTTTACAGAAAATTACAGAAAAAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGtgctg                                                                          >  2:2919682/1‑100 (MQ=255)
                             tACGTCATGGTTTTACAGAAAATTACAGAAAAAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCa                                                                        <  1:2512573/100‑1 (MQ=255)
                               tgtcggggTTTAGCAGAAAAATACAGAAAAAGGAGGCAATATCGGGTAAAGGCATTAGCACAACGACTACGTCGGGCTCCAAATATAATTGTgcagca                                                                        >  2:1651183/7‑98 (MQ=255)
                                 tCATGGTTTTACAGAAAATTACAGAAAAAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGgtg                                                                    <  1:1063189/100‑1 (MQ=255)
                                   aTGGTTTTACAGAAAATTACAGAAAAAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGtt                                                                  <  1:826632/100‑1 (MQ=255)
                                     ggTTTTACAGAAAATTACAGAAAAAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGtttt                                                                <  1:3504705/100‑1 (MQ=255)
                                     ggTTTTACAGAAAATTACAGAAAAAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGtttt                                                                <  2:2516203/100‑1 (MQ=255)
                                          tacagaaaattacagaaaaAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCgg                                                           <  2:3709717/100‑1 (MQ=255)
                                              naaaattacagaaaaAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGgttg                                                       >  1:2153018/2‑100 (MQ=255)
                                                aaattacagaaaaAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGgttgtt                                                     <  1:854937/100‑1 (MQ=255)
                                                    tacagaaaaAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATc                                                 <  1:4639/100‑1 (MQ=255)
                                                     acagaaaaAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATcc                                                <  2:1826205/100‑1 (MQ=255)
                                                     acagaaaaAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATcc                                                <  1:1757841/100‑1 (MQ=255)
                                                      cagaaaaAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCca                                               >  1:1470602/1‑100 (MQ=255)
                                                      cagaaaaAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCca                                               >  1:1668943/1‑100 (MQ=255)
                                                      cagaaaaAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATAAGTCGGGCTACAAATATTATTGTGCTTCAGGTGTTTTAGCGGGTTGTTGATCca                                               >  2:1815330/1‑100 (MQ=255)
                                                         aaaaaGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCcaca                                             <  2:479225/99‑1 (MQ=255)
                                                          aaaaGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAgg                                           <  1:1095492/100‑1 (MQ=255)
                                                          aaaaGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAgg                                           <  2:43143/100‑1 (MQ=255)
                                                           aaaGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGt                                          >  1:837640/1‑100 (MQ=255)
                                                             aggaggCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTc                                        <  1:3806159/100‑1 (MQ=255)
                                                             aggaggCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTc                                        >  1:2368495/1‑100 (MQ=255)
                                                              ggaggCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCt                                       >  1:2075747/1‑100 (MQ=255)
                                                              ggaggCAATAGCGGGTAAAGGCATTAGCCCGACTAATAGGTCGGGCTACAGATATTATTGTGCTGCAGGTGTGTTAGCGGGTTGTTGATCCACAGGTTCt                                       >  2:174509/1‑100 (MQ=255)
                                                                aggCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTaa                                     <  2:2266484/100‑1 (MQ=255)
                                                                  gCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACt                                   <  2:1896352/100‑1 (MQ=255)
                                                                  gCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACt                                   >  2:1360752/1‑100 (MQ=255)
                                                                   cAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTg                                  <  2:81912/100‑1 (MQ=255)
                                                                     atatCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGa                                <  1:3732002/100‑1 (MQ=255)
                                                                     atatCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGa                                >  1:1113948/1‑100 (MQ=255)
                                                                      tatCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGaa                               >  2:1794155/1‑100 (MQ=255)
                                                                       atCGGGTAAAGGCATTAGCCCGAGGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAAg                              >  1:1336645/1‑100 (MQ=255)
                                                                       atCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCCGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAAg                              >  2:2089212/1‑100 (MQ=255)
                                                                        tCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAAGa                             >  1:1311203/1‑100 (MQ=255)
                                                                        tCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAAGa                             <  1:2677006/100‑1 (MQ=255)
                                                                          gggTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAAGAcc                           >  2:2535948/1‑100 (MQ=255)
                                                                           ggTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAAGACca                          <  1:3332984/100‑1 (MQ=255)
                                                                           ggTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAAGACca                          >  2:1110608/1‑100 (MQ=255)
                                                                           ggTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAAGACca                          >  2:3310304/1‑100 (MQ=255)
                                                                             tAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAAGACcaca                        <  1:2172155/100‑1 (MQ=255)
                                                                             tAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAAGACcaca                        <  1:627997/100‑1 (MQ=255)
                                                                             tAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAAGACcaca                        >  1:3685485/1‑100 (MQ=255)
                                                                               aaGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAAGACCACATc                      >  2:1045197/1‑100 (MQ=255)
                                                                                aGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAAGACCACATCg                     >  2:3196956/1‑100 (MQ=255)
                                                                                    tgtAGCCCGACGTATTCGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAGCTGGAAGACCACATCGAcc                  >  2:1798981/3‑99 (MQ=39)
                                                                                    tgtAGCCCGACGTATTCGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAAGACCACATCGACCt                 >  1:31731/3‑100 (MQ=255)
                                                                                       aGCCCGACGTATTCGTCGGGCTACAAATATTATTGTGCTGCAGTTGTTTTAGCGGGGTGTTGATCCACAGTTTCTAACTGGAAGACCACATCGACCTGat              >  2:2666985/1‑100 (MQ=255)
                                                                                       aGCCCGACGTATTCGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTGGAGGGTTGTTGATCCACAGGTTCTAACTGGAAGACCACATCGACCTGat              >  2:3126643/1‑100 (MQ=255)
                                                                                       aGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAAGACCACATCGACCTGat              >  2:1944102/1‑100 (MQ=255)
                                                                                        gCCCGACGTATTCGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAAGACCACATCGACCTGatc             >  1:1577552/1‑100 (MQ=255)
                                                                                        gCCCGACGTATTCGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAAGACCACATCGACCTGatc             >  2:1733504/1‑100 (MQ=255)
                                                                                        gCCCGACGTATTCGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGATTCTAACTGGAAGACCACATCGACCTGatc             >  1:571360/1‑100 (MQ=255)
                                                                                        gCCCGACGTATTCGTCGGGCTACAAATAGTAATGTGGTGGAGGTGTTAGAGCGGAGTGTTGATTCGTAGGTTATGACTGGACGACAAGATAGACATggt              >  2:3607315/1‑97 (MQ=255)
                                                                                        gCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAAGACCACATCGACCTGatc             <  1:3307903/100‑1 (MQ=255)
                                                                                         cccGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAAGACCACATCGACCTGatca            <  2:719425/100‑1 (MQ=255)
                                                                                          ccGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAAGACCACATCGACCTGatcat           >  1:2050906/1‑100 (MQ=255)
                                                                                           cgacgaATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAAGACCACATCGACCTGatcatc          >  1:1168908/1‑100 (MQ=255)
                                                                                            gacgaATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAAGACCACATCGACCTGAtcatca         <  1:921998/100‑1 (MQ=255)
                                                                                            gacgaATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAAGACCACATCGACCTGAtcatca         <  1:601956/100‑1 (MQ=255)
                                                                                            gacgaATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAAGACCACATCGACCTGAtcatca         >  1:2955815/1‑100 (MQ=255)
                                                                                               gaATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAAGACCACATCGACCTGATCATCAAAc      <  1:162489/100‑1 (MQ=255)
                                                                                               gaATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAAGACCACATCGACCTGATCATCAAAc      <  1:983304/100‑1 (MQ=255)
                                                                                                aaTACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAAGACCACATCGACCTGATCATCAAACt     >  2:679726/1‑100 (MQ=255)
                                                                                                   aCGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAAGACCACATCGACCTGATCATCAAACTGaa  <  1:3806577/100‑1 (MQ=255)
                                                                                                   aCGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAAGACCACATCGACCTGATCATCAAACTGaa  >  1:331050/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
TGATGAAACCGCGAGCAAAGATAGGTGATTACGTCATGGTTTTACAGAAAATTACAGAAAAAGGAGGCAATATCGGGTAAAGGCATTAGCCCGACGAATACGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAAGACCACATCGACCTGATCATCAAACTGAA  >  NC_000913/3067224‑3067422

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: