| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,596,395 | C→A | 17.1% | E3D (GAG→GAT) | livH ← | branched‑chain amino acid ABC transporter permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,596,395 | 0 | C | A | 17.1% | 484.5 / 76.8 | 181 | E3D (GAG→GAT) | livH | branched‑chain amino acid ABC transporter permease |
| Reads supporting (aligned to +/- strand): ref base C (81/69); new base A (11/20); total (92/89) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.59e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.77e-01 | |||||||||||
Only 100 of 185 total aligned reads displayed.
GATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGCTCAGACATAAGGTAACCTTTCTAAACCCGCCCGCATTTTACGGGCGGTGGGATGATCACTTGGCTGCCGTGGATGAACCGTCGGCGTGCCACTGGAAGA > NC_000913/3596296‑3596494 | gATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGc > 1:1716270/1‑100 (MQ=255) tAATGCCGTAAACCATGGTGTAGCCGATTGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGCt < 1:3752443/99‑1 (MQ=255) tAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGCTc < 1:377561/100‑1 (MQ=255) tAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGCTc < 2:1088535/100‑1 (MQ=255) aaTGCCGTAAACCATGGTGTCGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGCTCa > 2:2330784/1‑100 (MQ=255) aaTGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGCTCa > 2:1347471/1‑100 (MQ=255) aaTGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGCTCa < 2:1524425/100‑1 (MQ=255) aTGCCGTAAACCAGGGTGGAGCCGACAGCTATCAGCGCGTAGGTACTGCCCAGATTGACGCCGTTAAATATCTGCTGAAAAAAAAAAAAAAACTGATCAg < 2:3735958/100‑1 (MQ=255) tGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGATCAGa < 2:1116037/100‑1 (MQ=255) gCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGATCAGAc < 2:1288893/100‑1 (MQ=255) gCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTAAAAAAAAAAAAAAAACTGATCAGa < 2:615630/99‑1 (MQ=255) tAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGCTCAGACATaa < 2:1788957/100‑1 (MQ=255) aaCCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGCTCAGACATAAgg > 1:2792553/1‑100 (MQ=255) aaCCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGATCAGACATAAgg < 2:306999/100‑1 (MQ=255) aCCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGCTCAGACATAAGGt < 2:3608631/100‑1 (MQ=255) ccATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGCTCAGACATAAGGTa > 2:252214/1‑100 (MQ=255) cATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGCTCAGACATAAGGTaa > 1:419849/1‑100 (MQ=255) aTGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTAAAAAAAAAAAAAAAACTGCTCAGACATAAgg < 2:2269393/96‑1 (MQ=255) tGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGCTCAGACATAAGGTAAcc < 2:2744549/100‑1 (MQ=255) ggTGTAGCCGATGGCTATCAGCGCGGAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGATCAGACATAAGGTAAcc < 2:2830021/99‑1 (MQ=255) gtAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGCTCAGACATAAGGTAACCTTTc > 2:3303585/1‑100 (MQ=255) gtAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGCTCAGACATAAGGTAACCTTTc < 1:3744172/100‑1 (MQ=255) aGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGCTCAGACATAAGGTAACCTTTCTa > 2:3558556/1‑100 (MQ=255) aGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGCTCAGACATAAGGTAACCTTTCTa < 1:3138240/100‑1 (MQ=255) aGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGCTCAGACATAAGGTAACCTTTCTa > 2:96628/1‑100 (MQ=255) gCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGATCAGACATAAGGTAACCTTTCTaa > 1:3399128/1‑100 (MQ=255) ccGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGCTCAGACATAAGGTAACCTTTCTaaa > 1:2472130/1‑100 (MQ=255) cGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGATCAGACATAAGGTAACCTTTCTAAAc < 2:261276/100‑1 (MQ=255) gATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGCTCAGACATAAGGTAACCTTTCTAAAcc > 1:1752053/1‑100 (MQ=255) gCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAACACTGCTCAGACATAAGGTAACCTTTCTAAAcccgcc < 2:692440/100‑1 (MQ=255) gCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGCTCAGACATAAGGTAACCTTTCTAAAcccgcc > 1:477283/1‑100 (MQ=255) gCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGATCAGACATAAGGTAACCTTTCTAAAcccgcc > 2:1827134/1‑100 (MQ=255) tATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGCTCAGACATAAGGTAACCTTTCTAAAcccgcccg < 2:2489798/100‑1 (MQ=255) aGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGCTCAGACATAAGGTAACCTTTCTAAACCCGCCCGCAtt > 1:3079640/1‑100 (MQ=255) gcgcGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGATCAGACATAAGGTAACCTTTCTAAACCCGCCCGCAttt > 1:1575430/1‑100 (MQ=255) aGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGCTCAGACATAAGGTAACCTTTCTAAACCCGCCCGCATTTTACggg < 2:2733930/100‑1 (MQ=255) ggTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGCTCAGACATAAGGTAACCTTTCTAAACCCGCCCGCATTTTACGGGc > 1:262396/1‑100 (MQ=255) ggTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGCTCAGACATAAGGTAACCTTTCTAAACCCGCCCGCATTTTACGGGc > 1:1519871/1‑100 (MQ=255) gTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGATCAGACATAAGGTAACCTTTCTAAACCCGCCCGCATTTTACGGGCg < 2:3394327/100‑1 (MQ=255) tACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGCTCAGGCACAAGGTAACCTTTCTAAACCCGCCCGCATTTTACGGGCgg > 2:2676310/1‑100 (MQ=255) cTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGCTCAGACATAAGGTAACCTTTCTAAACCCGCCCGCATTTTACGGGCGGTg > 1:816615/1‑100 (MQ=255) cTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGCTCAGACATAAGGTAACCTTTCTAAACCCGCCCGCATTTTACGGGCGGTg < 1:285590/100‑1 (MQ=255) tGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGCTCAGACATAAGGTAACCTTTCTAAACCCGCCCGCATTTTACGGGCGGTgg < 2:197543/100‑1 (MQ=255) ccAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGATCAGACATAAGGTAACCTTTCTAAACCCGCCCGCATTTTACGGGCGGTGGgat > 1:2094481/1‑100 (MQ=255) cAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGCTCAGACATAAGGTAACCTTTCTAAACCCGCCCGCATTTTACGGGCGGTGGgatg > 1:1666009/1‑100 (MQ=255) cAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGCTCAGACATAAGGTAACCTTTCTAAACCCGCCCGCATTTTACGGGCGGTGGgat < 2:3218419/99‑1 (MQ=255) aGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGCTCAGACATAAGGTAACCTTTCTAAACCCGCCCGCATTTTACGGGCGGTGGgatga < 2:2498347/100‑1 (MQ=255) cGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGCTCAGACATAAGGTAACCTTTCTAAACCCGCCCGCATTTTACGGGCGGTGGGATGATc < 1:237951/100‑1 (MQ=255) cGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGCTCAGACATAAGGTAACCTTTCTAAACCCGCCCGCATTTTACGGGCGGTGGGATGATc < 1:3430156/100‑1 (MQ=255) taaCGCCGTTAAAGATCTGCTGCAAGAAATACAAAAACTGCTCAGACATAAGGTAACCTTTCTAAACCCGCCCGCATTTTACGGGCGGTGGGATGATCAc > 1:2589913/3‑100 (MQ=255) tGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGATCAGACATAAGGTAACCTTTCTAAACCCGCCCGCATTTTACGGGCGGTGGGATGATCAc < 2:1583329/100‑1 (MQ=255) cGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGCTCAGACATAAGGTAACCTTTCTAAACCCGCCCGCATTTTACGGGCGGTGGGATGATCACTTg < 1:662958/100‑1 (MQ=255) cGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGCTCAGACATAAGGTAACCTTTCTAAACCCGCCCGCATTTTACGGGCGGTGGGATGATCACTTg < 2:3470488/100‑1 (MQ=255) gCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGCTCAGACATAAGGTAACCTTTCTAAACCCGCCCGCATTTTACGGGCGGTGGGATGATCACTTgg > 2:467545/1‑100 (MQ=255) ccgatctaaCATCTGCTGCAAGAAATACAAAAACTGCTCAGACATAAGGTAACCTTTCTAAACCCGCCCGCATTTTACGGGCGGTGGGATGATCACTTgg < 1:988267/93‑1 (MQ=255) ccGTTAAACATCTGCTGCAAGAAATACAAAAACTGCTCAGACATAAGGTAACCTTTCTAAACCCGCCCGCATTTTACGGGCGGTGGGATGATCACTTGGc < 1:1049419/100‑1 (MQ=255) ccGTTAAACATCTGCTGCAAGAAATACAAAAACTGATCAGACATAAGGTAACCTTTCTAAACCCGCCCGCATTTTACGGGCGGTGGGATGATCACTTGGc < 1:594710/100‑1 (MQ=255) cGTTAAACATCTGCTGCAAGAAATACAAAAACTGCTCAGACATAAGGTAACCTTTCTAAACCCGCCCGCATTTTACGGGCGGTGGGATGATCACTTGGCt < 2:3012569/100‑1 (MQ=255) cGTTAAACATCTGCTGCAAGAAATACAAAAACTGCTCAGACATAAGGTAACCTTTCTAAACCAGCCCGCATTTTACGGGCGGTGGGATGATCACTTGTCt > 2:303606/1‑100 (MQ=255) cGTTAAACATCTGCTGCAAGAAATACAAAAACTGCTCAGACATAAGATAACCTTTCTAAAACCGCCCGCATTTTACGGGCGGTGGCATGATCACATg > 2:1660488/1‑97 (MQ=255) gTTAAACATCTGCTGCAAGAAATACAAAAACTGCTCAGACATAAGGTAACCTTTCTAAACCCGCCCGCATTTTACGGGCGGTGGGATGATCACTTGGCTg < 1:2127246/100‑1 (MQ=255) gTTAAACATCTGCTGCAAGAAATACAAAAACTGCTCAGACATAAGGTAACCTTTCTAAACCCGCCCGCATTTTACGGGCGGTGGGATGATCACTTGGCTg > 1:907374/1‑100 (MQ=255) aaaCATCTGCTGCAAGAAATACAAAAACTGCTCAGACATAAGGTAACCTTTCTAAACCCGCCCGCATTTTACGGGCGGTGGGATGATCACTTGGCTGcc > 2:2533491/1‑99 (MQ=255) aaaCATCTGCTGCAAGAAATACAAAAACTGCTCAGACATAAGGTAACCTTTCTAAACCCGCCCGCATTTTACGGGCGGTGGGATGATCACTTGGCTGCCg > 2:2974240/1‑100 (MQ=255) aaCATCTGCTGCAAGAAATACAAAAACTGATCAGACATAAGGTAACCTTTCTAAACCCGCCCGCATTTTACGGGCGGTGGGATGATCACTTGGCTGCCGt < 2:340849/100‑1 (MQ=255) aCATCTGCTGCAAGAAATACAAAAACTGCTCAGACATAAGGTAACCTTTCTAAACCCGCCCGCATTTTACGGGCGGTGGGATGATCACTTGGCTGCCGTg < 1:1030450/100‑1 (MQ=255) aCATCTGCTGCAAGAAATACAAAAACTGCTCAGACATAAGGTAACCTTTCTAAACCCGCCCGCATTTTACGGGCGGTGGGATGATCACTTGGCTGCCGTg < 1:2743340/100‑1 (MQ=255) aCATCTGCTGCAAGAAATACAAAAACTGATCAGACATAAGGTAACCTTTCTAAACCCGCCCGCATTTTACGGGCGGTGGGATGATCACTTGGCTGCCGTg > 1:1778624/1‑100 (MQ=255) cATCTGCTGCAAGAAATACAAAAACTGCTCAGACATAAGGTAACCTTTCTAAACACGCCCGCATTTATCGGGCGGTGGGATGATCACTTGGCTGCCGTgg > 2:1454903/1‑100 (MQ=255) cATCTGCTGCAAGAAATACAAAAACTGATCAGACATAAGGTAACCTTTCTAAACCCGCCCGCATTTTACGGGCGGTGGGATGATCACTTGGCTGCCGTgg > 2:770192/1‑100 (MQ=255) tCTGCTGCAAGAAATACAAAAACTGCTCAGACATAAGGTAACCTTTCTAAACCCGCCCGCATTTTACGGGCGGTGGGATGATCACTTGGCTGCCGTGGAt < 1:125900/100‑1 (MQ=255) tCTGCTGCAAGAAATACAAAAACTGCTCAGACATAAGGTAACCTTTCTAAACCCGCCCGCATTTTACGGGCGGTGGGATGATCACTTGGCTGCCGTGGAt < 1:1638374/100‑1 (MQ=255) tCTGCTGCAAGAAATACAAAAACTGCTCAGACATAAGGTAACCTTTCTAAACCCGCCCGCATTTTACGGGCGGTGGGATGATCACTTGGCTGCCGTGGAt > 1:142354/1‑100 (MQ=255) gctgcAAGAAATACAAAAACTGCTCAGACATAAGGTAACCTTTCTAAACCCGCCCGCATTTTACGGGCGGTGGGATGATCACTTGGCTGCCGTGGATGaa > 2:2065188/1‑100 (MQ=255) ctgcAAGAAATACAAAAACTGCTCAGACATAAGGTAACCTTTCTAAACCCGCCCGCATTTTACGGGCGGTGGGATGATCACTTGGCTGCCGTGGATGAAc > 1:1304227/1‑100 (MQ=255) ctgcAAGAAATACAAAAACTGCTCAGACATAAGGTAACCTTTCTAAAACCGCCCGCATTTTACGGGCGGTGGGATGATCACTTGGCTGCCGTGGATGaa > 1:3236514/1‑99 (MQ=255) ctgcAAGAAAGACAAAAACTGATCAGACATAAGGTAACCTTTCTAAACCCGCCCGCATTTTACGGGCGGTGGGATGATCACTTGGCTGCCGTGGATGAAc < 2:2384548/100‑1 (MQ=255) tgcAAGAAATACAAAAACTGCTCAGACATAAGGTAACCTTTCTAAACCCGCCCGCATTTTACGGGCGGTGGGATGATCACTTGGCTGCCGTGGATGAAcc < 1:3361768/100‑1 (MQ=255) tgcAAGAAATACAAAAACTGCTCAGACATAAGGTAACCTTTCGAAACCCGCCCGCATTTTACGGGCGGTGGGATGATCACTTGGCTGCCGTGGATGAAcc < 1:3678631/100‑1 (MQ=255) gcAAGAAATACAAAAACTGCTCAGACATAAGGTAACCTTTCTAAACCCGCCCGCATTTTACGGGCGGTGGGATGATCACTTGGCTGCCGTGGATGAACCg > 1:2315675/1‑100 (MQ=255) gcAAGAAATACAAAAACTGCTCAGACATAAGGTAACCTTTCTAAACCCGCCCGCATTTTACGGGCGGTGGGATGATCACTTGGCTGCCGTGGATGAACCg > 1:2026527/1‑100 (MQ=255) gcAAGAAATACAAAAACTGATCAGACATAAGGTAACCTTTCTAAACCCGCCCGCATTTTACGGGCGGTGGGATGATCACTTGGCTGCCGTGGATGAACCg > 1:2087269/1‑100 (MQ=255) aaGAAATACAAAAACTGCTCAGACATAAGGTAACCTTTCTAAACCCGCCCGCATTTTACGGGCGGTGGGATGATCACTTGGCTGCCGTGGATGAACCGTc > 2:533167/1‑100 (MQ=255) gAAATACAAAAACTGATCAGACATAAGGTAACCTTGCTAAACCCGCCCGCATTTTACGGGCGGTGGGATGATCACTTGGCTGCCGTGGATGAACCGTCgg < 2:2889735/100‑1 (MQ=255) aTACAAAAACTGCTCAGACATAAGGTAACCTTTCTAAACCCGCCCGCATTTTACGGGCGGTGGGATGATCACTTGGCTGCCGTGGATGAACCGTCGGCGt < 1:3300807/100‑1 (MQ=255) tACAAAAACTGCTCAGACATAAGGTAACCTTTCTAAACCCGCCCGCATTTTACGGGCGGTGGGATGATCACTTGGCTGCCGTGGATGAACCGTCGGCGTg < 2:1881870/100‑1 (MQ=255) tACAAAAACTGCTCAGACATAAGGTAACCTTTCTAAACCCGCCCGCATTTTACGGGCGGTGGGATGATCACTTGGCTGCCGTGGATGAACCGTCGGCGTg > 1:1504117/1‑100 (MQ=255) tACAAAAACTGCTCAGACATAAGGTAACCTTTCTAAACCCGCCCGCATTTTACGGGCGGTGGGATGATCACTTGGCTGCCGTGGATGAACCGTCGGCGTg > 1:2465819/1‑100 (MQ=255) aCAATAACTGCTCAGACATAAGGTAACCTTTCTAAACCCACCCGCCTTCTACGGGCGGTGGGACGATCACTTCGCTGCCGTCGATGAAACGTCGGCGTg > 2:2349217/1‑99 (MQ=255) aCAAAAACTGCTCAGACATAAGGTAACCTTTCTAAACCCGCCCGCATTTTACGGGCGGTGGGATGATCACTTGGCTGCCGTGGATGAACCGTCGGCGTGc < 2:1376455/100‑1 (MQ=255) aCAAAAACTGCTCAGACATAAGGTAACCTTTCTAAACCCGCCCGCATTTTACGGGCGGTGGGATGATCACTTGGCTGCCGTGGATGAACCGTCGGCGTGc > 2:434669/1‑100 (MQ=255) cAAAAACTGCTCAGACATAAGGTAACCTTTCTAAACCCGCCCGCATTTTACGGGCGGTGGGATGATCACTTGGCTGCCGTGGATGAACCGTCGGCGTGcc > 2:2253016/1‑100 (MQ=255) cAAAAACTGCTCAGACATAAGGTAACCTTTCTAAACCCGCCCGCATTTTACGGGCGGTGGGATGATCACTTGGCTGCCGTGGATGAACCGTCGGCGTGcc > 2:866293/1‑100 (MQ=255) cAAAAACTGCTCAGACATAAGGTAACCTTTCTAAACCCGCCCGCATTTTACGGGCGGTGGGATGATCACTTGGCTGCCGTGGATGAACCGTCGGCGTGcc > 2:2429781/1‑100 (MQ=255) cAAAAACTGCTCAGACATAAGGTAACCTTTCTAAACCCGCCCGCATTTTACGGGCGGTGGGATGATCACTTGGCTGCCGTGGATGAACCGTCGGCGTGcc > 1:1966219/1‑100 (MQ=255) aaaaaCTGCTCAGACATAAGGTAACCTTTCTAAACCCGCCCGCATTTTACGGGCGGTGGGATGATCACTTGGCTGCCGTGGATGAACCGTCGGCGTGCCa > 1:3416037/1‑100 (MQ=255) aaaCTGCTCAGACATAAGGTGACCTTTCTTAACCCGCCCGCATTTTACGGGCGGGGGGATGATCACTTGGCTGCCGTGGATGTACCGTCGGGGTGCCACt < 2:3332929/100‑1 (MQ=255) aaaCTGCTCAGACATAAGGTAACCTTTCTAAACCCGCCCGCATTTTACGGGCGGTGGGATGATCACTTGGCTGCCGTGGATGAACCGTCGGCGTGCCACt > 1:65519/1‑100 (MQ=255) aaCTGCTCAGACATAAGGTAACCTTTCTAAACCCGCCCGCATTTTACGGGCGGTGGGATGATCACTTGGCTGCCGTGGATGAACCGTCGGCGTGCCACTg < 1:2735415/100‑1 (MQ=255) cTGCTCAGACATAAGGTAACCTTTCTAAACCCGCCCGCATTTTACGGGCGGTGGGATGATCACTTGGCTGCCGTGGATGAACCGTCGGCGTGCCACTGGa < 2:2922266/100‑1 (MQ=255) | GATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGCTCAGACATAAGGTAACCTTTCTAAACCCGCCCGCATTTTACGGGCGGTGGGATGATCACTTGGCTGCCGTGGATGAACCGTCGGCGTGCCACTGGAAGA > NC_000913/3596296‑3596494 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |