| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,185,193 | C→T | 42.1% | P1317S (CCG→TCG) | rpoB → | RNA polymerase, beta subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,185,193 | 0 | C | T | 42.1% | 94.7 / 168.2 | 158 | P1317S (CCG→TCG) | rpoB | RNA polymerase, beta subunit |
| Reads supporting (aligned to +/- strand): ref base C (49/42); new base T (31/35); total (80/78) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.22e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.95e-01 | |||||||||||
Only 100 of 160 total aligned reads displayed.
GCATACACCCTGCAGGAAATGCTCACCGTTAAGTCTGATGACGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCAAACAGGTCA > NC_000913/4185094‑4185292 | tACACCCTGCAGGAAATGCTCACCGTTAAGTCTGATGACGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGATGGCAACCATCAGATGGAGCCgg < 1:2276457/100‑1 (MQ=255) acacCCTGCAGGAAATGCTCACCGTTAAGTCTGATGACGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGTCggg < 1:3399413/100‑1 (MQ=255) acacCCTGCAGGAAATGCTCACCGTTAAGTCTGATGACGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCggg < 1:1918154/100‑1 (MQ=255) cacCCTGCAGGAAATGCTCACCGTTAAGTCTGATGACGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGTCggac > 1:108809/1‑98 (MQ=255) cacCCTGCAGGAAATGCTCACCGTTAAGTCTGATGACGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGc > 2:2927206/1‑100 (MQ=255) acCCTGCAGGAAATGCTCACCGTTAAGTCTGATGACGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGTCGGGCa < 2:1008792/100‑1 (MQ=255) ccTGCAGGAAATGCTCACCGTTAAGTCTGATGACGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATg > 2:2341942/1‑100 (MQ=255) cTGCAGGAAATGCTCACCGTTAAGTCTGATGACGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGc > 2:1875037/1‑100 (MQ=255) cTGCAGGAAATGCTCACCGTTAAGTCTGATGACGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGc < 1:2989985/100‑1 (MQ=255) cTGCAGGAAATGCTCACCGTTAAGTCTGATGACGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGc > 2:3407404/1‑100 (MQ=255) tGCAGGAAATGCTCACCGTTAAGTCTGATGACGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGTCGGGCATGcc > 1:222448/1‑100 (MQ=255) tGCAGGAAATGCTCACCGTTAAGTCTGATGACGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGcc < 2:534661/100‑1 (MQ=255) cAGGAAATGCTCACCGTTAAGTCTGATGACGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGTCGGGCATGCCAg < 2:487288/100‑1 (MQ=255) cAGGAAATGCTCACCGTTAAGTCTGATGACGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGTCAGGCATGCCAg < 2:1383571/100‑1 (MQ=255) aGGAAATGCTCACCGTTAAGTCTGATGACGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGa > 2:3619965/1‑100 (MQ=255) aaaTGCTCACCGTTAAGTCTGATGACGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATc < 2:1068928/100‑1 (MQ=255) aaTGCTCACCGTTAAGTCTGATGACGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGTCGGGCATGCCAGAATcc < 1:3815539/100‑1 (MQ=255) cTCACCGTTAAGTCTGATGACGTGAACGGTCGTACCCAGATGTATAAAAACCTCGTGGACGGCAACCAGCAGATGGAGTCGGGCATGCTAGAATCCTTCa > 2:174108/1‑100 (MQ=255) cTCACCGTTAAGTCTGATGACGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGTCGGGCATGCCAGAATCCTTCa > 1:3344652/1‑100 (MQ=255) cTCACCGTTAAGTCTGATGACGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGTCGGGCATGCCAGAATCCTTCa > 2:808533/1‑100 (MQ=255) tCACCGTTAAGTCTGATGACGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGTCGGGCATGCCAGAATCCTTCaa > 1:1219086/1‑100 (MQ=255) tCACCGTTAAGTCTGATGACGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGTCGGGCATGCCAGAATCCTTCaa > 2:763763/1‑100 (MQ=255) cACCGTTAAGTCTGATGACGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGTCGGGCATGCCAGAATCCTTCAAc < 1:3605127/100‑1 (MQ=255) cACCGTTAAGTCTGATGACGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCTTCAAc < 1:798357/100‑1 (MQ=255) cACCGTTAAGTCTGATGACGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCTTCAAc > 1:2410376/1‑100 (MQ=255) cACCGTTAAGTCTGATGACGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCCTCAAc < 1:3348090/100‑1 (MQ=255) aCCGTTAAGTCTGATGACGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGTCGGGCATGCCAGAATCCTTCAACg < 2:2108262/100‑1 (MQ=255) ccGTTAAGTCTGATGACGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGTCGGGCATGCCAGAATCCTTCAACGt > 1:2769030/1‑100 (MQ=255) gTTAAGTCTGATGACGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGTCGGGCATGCCAGAATCCTTCAACGTAt > 1:2298219/1‑100 (MQ=255) gTTAAGTCTGATGACGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCTTCAACGTAt > 1:3546535/1‑100 (MQ=255) tAAGTCTGATGACGTGAACGGTCGTACCAAGATGTATAAAAACATCATGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCCTCAACGTAttg < 2:2852303/100‑1 (MQ=255) aaGTCTGATGACGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGTCGGGCATGCCAGAATCATTCAACg < 2:2007026/94‑1 (MQ=255) aaGTCTGATGACGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCTTCAACGTAttgt > 1:2494490/1‑100 (MQ=255) gTCTGATGACGTGAACGGTCTTACCAAGGTGTATAAAAACATCGTGGACGGAAACCATCAGATGGATCCGGGCATGCTAGAATCCTGGCACGTAtt > 2:3355118/1‑96 (MQ=255) gTCTGATGACGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCTTCAACGTAttgttg > 1:842346/1‑100 (MQ=255) cTGATGACGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCCTCAACGTATTGTTGaa > 2:129782/1‑100 (MQ=255) tgatgaCGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGTCGGGCATGCCAGAATCCTTCAACGTATTGTTGaaa < 2:473170/100‑1 (MQ=255) tgatgaCGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCCTCAACGTATTGTTGaca > 2:2512148/1‑98 (MQ=255) gatgaCGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGTCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAag < 1:3374139/100‑1 (MQ=255) atgaCGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAaga < 2:2196202/100‑1 (MQ=255) tgaCGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGTCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAagag < 1:2482718/100‑1 (MQ=255) tgaCGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAagag < 1:1081345/100‑1 (MQ=255) gaCGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGTCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAgaga < 2:2791192/100‑1 (MQ=255) aCGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGAt > 2:1722865/1‑100 (MQ=255) cGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCCTCAACGTATTGTTGAAAGAGAtt > 1:2499234/1‑100 (MQ=255) gTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCCTCAACGTATTGTTGAAAGAGAttc < 2:3605548/100‑1 (MQ=255) gTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCCTCAACGTATTGTTGAAAGAGAttc < 1:1368574/100‑1 (MQ=255) tGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCCTCAACGTATTGTTGAAAGAGAttcg < 1:3407430/100‑1 (MQ=255) aaCGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCCTGCCAGAATCCCTCAACGTATTGTTGAAAGAGAttcgtt > 2:2686113/1‑100 (MQ=255) gTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCCTCAACGTATTGTTGAAAGAGATTCGTTCGCt > 2:834216/1‑100 (MQ=255) cGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGTCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTgg < 1:683598/100‑1 (MQ=255) gTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGTCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTggg < 2:1034147/100‑1 (MQ=255) gTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATGCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTggg < 1:2695093/100‑1 (MQ=255) gTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTggg < 2:2396775/100‑1 (MQ=255) gATGTATAAAAACATTGTGGACGGCAACCATCAGATGGAGTCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAAc > 1:1290476/1‑100 (MQ=255) aTGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGTCGGGCATGCCAGAATCCTTCAACGTATTGTTGAGAGAGATTCGTTCGCTGGGTATCAACa < 1:2330419/100‑1 (MQ=255) tGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGTCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACAt > 2:1454910/1‑100 (MQ=255) gTATAAAAACATCGTGGACGGCAACCATCAGATGGAGTCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATc > 1:3151873/1‑100 (MQ=255) gTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATc > 1:846385/1‑100 (MQ=255) gTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCCTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATc < 2:3331418/100‑1 (MQ=255) taAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCCTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGaa > 1:2416017/1‑100 (MQ=255) aaaaCATCGTGGACGGCAACCATCAGATGGAGCCGGGCCTGCCAGAATCCCTCAACGTATTGTTGCAAGAGATTCGTTCGCTGGGTATCAACATCGAACt > 2:1708879/1‑100 (MQ=255) aaaaCATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACt < 1:2225766/100‑1 (MQ=255) aaaaCATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCCTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACt > 1:2177987/1‑100 (MQ=255) aaaCATCGTGGACGGCAACCATCAGATGGAGTCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTg < 2:394778/100‑1 (MQ=255) aaCATCGTGGACGGCAACCATCAGATGGAGTCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTgg < 1:142867/100‑1 (MQ=255) aaCATCGTGGACGGCAACCATCAGATGGAGTCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTgg < 2:719308/100‑1 (MQ=255) aCATCGTGGACGGCAACCATCAGATGGAGTCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTGGa < 1:2149911/100‑1 (MQ=255) aTCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTGGAAg < 1:472117/100‑1 (MQ=255) cGTGGACGGCAACCATCAGATGGAGTCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTGGAAGAc > 1:1848509/1‑100 (MQ=255) cGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTGGAAGAc < 1:960596/100‑1 (MQ=255) gTGGACGGCAACCATCAGATGGAGTCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTGGAAGACg < 1:2988150/100‑1 (MQ=255) gTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCCTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTGGAAGACg < 1:2675951/100‑1 (MQ=255) gTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCCTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTGGAAGACg < 2:881299/100‑1 (MQ=255) tGGACGGCAACCATCAGATGGAGTCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTGGAAGACGa > 1:1521727/1‑100 (MQ=255) ggACGGCAACCATCAGATGGAGTCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTGGAAGACGAg > 2:1306656/1‑100 (MQ=255) aCGGCAACCATCAGATCGAGTCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGTGTATCAACATCGAACTGGAAGACGAGTa < 2:1558635/100‑1 (MQ=255) cGGCAACCATCAGATGGAGTCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTGGAAGACGAGTaa > 2:1435181/1‑100 (MQ=255) cGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCCTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTGGAAGACGAGTaa > 1:2756806/1‑100 (MQ=255) ggCAACCATCAGATGGAGCCGGGCATGCCAGAATCCCTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTGGAAGACGAGTAAt < 1:348267/100‑1 (MQ=255) gCAACCATCAGATGGAGCCGGGCATGCCAGAATCCCTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTGGAAGACGAGTAAtt > 1:1215374/1‑100 (MQ=255) cAACCATCAGATGGAGCCGGGCATGCCAGAATCCCTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTGGAAGACGAGTAATtc > 2:241153/1‑100 (MQ=255) cATCAGATTGAGGAGGGCATGCCATAATGCTGCAACGTATTGTTGAAAGGGATTCGTTCGCTGGGTATCAACATCGAGCTGGAAGACGAGTAGTTCTCGc < 2:1118914/100‑1 (MQ=255) cATCAGATGGAGTCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTGGAAGACGAGTAATTCTCGc > 2:2775863/1‑100 (MQ=255) aTCAGATGGAGCCGGGCATGCCAGAATCCCTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTGGAAGACGAGTAATTCTCGCt > 2:2729856/1‑100 (MQ=255) aTCAGATGGAGCCGGGCATGCCAGAATCCCTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTGGAAGACGAGTAATTCTCGCt > 1:1902346/1‑100 (MQ=255) tCAGATGGAGCCGGGCATGCCAGAATCCCTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTGGAAGACGAGTAATTCTCGCTc > 1:929035/1‑100 (MQ=255) tCAGATGGAGCCGGGCATGCCAGAATCCCTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTGGAAGACGAGTAATTCTCGCTc < 1:1520645/100‑1 (MQ=255) cAGATGGAGTCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCa < 1:3155125/100‑1 (MQ=255) gATGGAGTCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCaaa > 1:322226/1‑100 (MQ=255) attgAGCCGAGCATGCCAGAATCCCTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCAAAc < 2:2689912/97‑1 (MQ=255) aTGGAGTCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCaaan < 2:348910/100‑2 (MQ=255) tGGAGCCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTTGTTCGCTGGGTATCAACATCGAACTGGAAGACGAGTAATTCTAGCTCAAACa > 2:2521898/1‑100 (MQ=255) gAGTCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCAAACAgg > 2:1527790/1‑100 (MQ=255) gAGCCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCAAACAgg < 2:3546508/100‑1 (MQ=255) aGCCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCAAACAGGt > 2:2064568/1‑100 (MQ=255) aGCCGGGCATGCCAGAATCCCTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCAAACAGGt > 1:3466487/1‑100 (MQ=255) gCCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCAAACAGGTc > 1:516868/1‑100 (MQ=255) gCCGGGCATGCCAGAATCCCTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCAAACAGGTc > 1:2267316/1‑100 (MQ=255) ccGGGCATGCCAGAATCCCTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCAAACAGGTCa < 1:2927227/100‑1 (MQ=255) | GCATACACCCTGCAGGAAATGCTCACCGTTAAGTCTGATGACGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCAAACAGGTCA > NC_000913/4185094‑4185292 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |