| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,185,211 | T→C | 33.3% | F1323L (TTC→CTC) | rpoB → | RNA polymerase, beta subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,185,211 | 0 | T | C | 33.3% | 156.9 / 137.2 | 153 | F1323L (TTC→CTC) | rpoB | RNA polymerase, beta subunit |
| Reads supporting (aligned to +/- strand): ref base T (52/50); new base C (26/25); total (78/75) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.43e-01 | |||||||||||
Only 100 of 156 total aligned reads displayed.
TGCTCACCGTTAAGTCTGATGACGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCAAACAGGTCACTGCTGTCGGGTTAAAAC > NC_000913/4185113‑4185310 | tGCTCACCGTTAAGTCTGATGACGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCtt < 1:2393955/100‑1 (MQ=255) gCTCACCGTTAAGTCTGATGACGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCTTc < 1:3364422/100‑1 (MQ=255) ntCACCGTTAAGTCTGATGACGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGTCGGGCATGCCAGAATCCTTCa > 1:348912/2‑100 (MQ=255) cTCACCGTTAAGTCTGATGACGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGTCGGGCATGCCAGAATCCTTCa > 2:808533/1‑100 (MQ=255) cTCACCGTTAAGTCTGATGACGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGTCGGGCATGCCAGAATCCTTCa > 1:3344652/1‑100 (MQ=255) tCACCGTTAAGTCTGATGACGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGTCGGGCATGCCAGAATCCTTCaa > 1:1219086/1‑100 (MQ=255) cACCGTTAAGTCTGATGACGTGAACGGTCGTACCAAGATGTATACAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCTTCAAc > 2:774955/1‑100 (MQ=255) cACCGTTAAGTCTGATGACGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCTTCAAc < 1:798357/100‑1 (MQ=255) cACCGTTAAGTCTGATGACGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCCTCAAc < 1:3348090/100‑1 (MQ=255) aCCGTTAAGTCTGATGACGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGTCGGGCATGCCAGAATCCTTCAACg < 2:2108262/100‑1 (MQ=255) ccGTTAAGTCTGATGACGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGTCGGGCATGCCAGAATCCTTCAACGt > 1:2769030/1‑100 (MQ=255) gTTAAGTCTGATGACGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGTCGGGCATGCCAGAATCCTTCAACGTAt > 1:2298219/1‑100 (MQ=255) gTTAAGTCTGATGACGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCTTCAACGTAt > 1:3546535/1‑100 (MQ=255) aaGTCTGATGACGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGTCGGGCATGCCAGAATCATTCAACg < 2:2007026/94‑1 (MQ=255) aaGTCTGATGACGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCTTCAACGTAttgt > 2:1858746/1‑100 (MQ=255) aaGTCTGATGACGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCTTCAACGTAttgt > 1:2494490/1‑100 (MQ=255) aGTCTGATGACGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGTCGGGCATGCCAGAATCCTTCAACGTAttgtt < 1:2429377/100‑1 (MQ=255) gTCTGATGACGTGAACGGTCTTACCAAGGTGTATAAAAACATCGTGGACGGAAACCATCAGATGGATCCGGGCATGCTAGAATCCTGGCACGTAtt > 2:3355118/1‑96 (MQ=255) gTCTGATGACGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCTTCAACGTAttgttg > 1:842346/1‑100 (MQ=255) cTGATGACGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCCTCAACGTATTGTTGaa > 2:129782/1‑100 (MQ=255) tgatgaCGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCCTCAACGTATTGTTGaca > 2:2512148/1‑98 (MQ=255) gatgaCGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGTCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAag < 1:3374139/100‑1 (MQ=255) atgaCGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAaga < 2:2196202/100‑1 (MQ=255) tgaCGTGAACGTTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCCTCAACGTATTGTTGAAagag < 1:3409158/100‑1 (MQ=255) tgaCGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGTCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAagag < 1:382716/100‑1 (MQ=255) tgaCGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAagag < 1:1081345/100‑1 (MQ=255) gaCGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGTCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAgaga < 2:2791192/100‑1 (MQ=255) aCGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGAt > 2:1722865/1‑100 (MQ=255) cGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGAtt < 2:347667/100‑1 (MQ=255) gTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGTCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGAttc < 2:2769010/100‑1 (MQ=255) gTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCCTCAACGTATTGTTGAAAGAGAttc < 1:1368574/100‑1 (MQ=255) tGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGAttcg > 2:104844/1‑100 (MQ=255) tGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCCTCAACGTATTGTTGAAAGAGAttcg < 1:3407430/100‑1 (MQ=255) aaCGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCCTGCCAGAATCCCTCAACGTATTGTTGAAAGAGAttcgtt > 2:2686113/1‑100 (MQ=255) cGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGAttcgttcg > 2:3352474/1‑100 (MQ=255) gTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCCTCAACGTATTGTTGAAAGAGATTCGTTCGCt > 2:834216/1‑100 (MQ=255) gTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGTCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTggg > 1:814074/1‑100 (MQ=255) gTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATGCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTggg < 1:2695093/100‑1 (MQ=255) aCCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTa < 1:1822121/100‑1 (MQ=255) aaGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGTCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCa > 2:509370/1‑100 (MQ=255) aaGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGTCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCa < 2:1425249/100‑1 (MQ=255) aaGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGTCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCa > 2:1713939/1‑100 (MQ=255) gATGTATAAAAACATTGTGGACGGCAACCATCAGATGGAGTCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAAc > 1:1290476/1‑100 (MQ=255) gATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCCTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAAc < 2:2399694/100‑1 (MQ=255) aTGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGTCGGGCATGCCAGAATCCTTCAACGTATTGTTGAGAGAGATTCGTTCGCTGGGTATCAACa < 1:2330419/100‑1 (MQ=255) aTGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGTCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACa < 2:455802/100‑1 (MQ=255) tGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGTCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACAt > 2:1454910/1‑100 (MQ=255) gTATAAAAACATCGTGGACGGCAACCATCAGATGGAGTCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATc > 1:3151873/1‑100 (MQ=255) gTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATc > 1:846385/1‑100 (MQ=255) taAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCCTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGaa > 1:2416017/1‑100 (MQ=255) aaaaCATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACt < 1:2225766/100‑1 (MQ=255) aaaaCATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCCTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACt > 1:2177987/1‑100 (MQ=255) aaaCATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCCTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTg < 1:3661101/100‑1 (MQ=255) aaCATCGTGGACGGCAACCATCAGATGGAGTCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTgg < 2:719308/100‑1 (MQ=255) aaCATCGTGGACGGCAACCATCAGATGGAGTCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTgg < 2:2805826/100‑1 (MQ=255) aaCATCGTGGACGGCAACCATCAGATGGAGTCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTgg < 1:142867/100‑1 (MQ=255) aaCAGCGTGGACGGCAACCATCAGATGGAGTCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTgg < 1:2786621/100‑1 (MQ=255) aCATCGTGGACGGCAACCATCAGATGGAGTCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTGGa < 1:2149911/100‑1 (MQ=255) cGTGGACGGCAACCATCAGATGGAGTCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTGGAAGAc > 1:1848509/1‑100 (MQ=255) cGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTGGAAGAc < 1:960596/100‑1 (MQ=255) gTGGACGGCAACCATCAGATGGAGTCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTGGAAGACg < 1:2988150/100‑1 (MQ=255) ggACGGCAACCATCAGATGGAGTCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTGGAAGACGAg > 2:874742/1‑100 (MQ=255) aCGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCCTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTGGAAGACGAGTa > 1:2987174/1‑100 (MQ=255) aCGGCAACCATCAGATCGAGTCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGTGTATCAACATCGAACTGGAAGACGAGTa < 2:1558635/100‑1 (MQ=255) ggCAACCATCAGATGGAGCCGGGCATGCCAGAATCCCTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTGGAAGACGAGTAAt < 1:348267/100‑1 (MQ=255) gCAACCATCAGATGGAGCCGGGCATGCCAGAATCCCTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTGGAAGACGAGTAAtt > 1:1215374/1‑100 (MQ=255) cAACCATCAGATGGAGCCGGGCATGCCAGAATCCCTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTGGAAGACGAGTAATtc > 2:241153/1‑100 (MQ=255) cAACCATCAGATGGAGCCGGGCATGCCAGAATCCCTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTGGAAGACGAGTAATtc < 2:162599/100‑1 (MQ=255) cAACCATCAGATGGAGCCGGGCATGCCAGAATCCCTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTGGAAGACGAGTAATtc > 1:2498352/1‑100 (MQ=255) aaCCATCAGATGGAGCCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTGGAAGACGAGTAATtc < 2:1032625/99‑1 (MQ=255) cATCAGATTGAGGAGGGCATGCCATAATGCTGCAACGTATTGTTGAAAGGGATTCGTTCGCTGGGTATCAACATCGAGCTGGAAGACGAGTAGTTCTCGc < 2:1118914/100‑1 (MQ=255) cATCAGATGGAGCCGGGCATGCCAGACTCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCACCATCGAACTGGAAGACGAGTAATTCTCGc < 2:1512343/100‑1 (MQ=255) aTCAGATGGAGCCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTGGAAGACGAGTAATTCTCGCt > 1:2703192/1‑100 (MQ=255) aTCAGATGGAGCCGGGCATGCCAGAATCCCTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTGGAAGACGAGTAATTCTCGCt > 1:1902346/1‑100 (MQ=255) aTCAGATGGAGCCGGGCATGCCAGAATCCCTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTGGAAGACGAGTAATTCTCGCt > 2:2729856/1‑100 (MQ=255) tCAGATGGAGCCGGGCATGCCAGAATCCCTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTGGAAGACGAGTAATTCTCGCTc < 1:1520645/100‑1 (MQ=255) tCAGATGGAGCCGGGCATGCCAGAATCCCTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTGGAAGACGAGTAATTCTCGCTc > 1:929035/1‑100 (MQ=255) cAGATGGAGTCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCa < 1:3155125/100‑1 (MQ=255) cAGATGGAGCCGGGCATGCCAGAATCCCTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCa < 1:252645/100‑1 (MQ=255) gATGGAGTCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCaaa > 1:322226/1‑100 (MQ=255) attgAGCCGAGCATGCCAGAATCCCTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCAAAc < 2:2689912/97‑1 (MQ=255) aTGGAGTCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCaaan < 2:348910/100‑2 (MQ=255) gAGCCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCAAACAgg < 2:3546508/100‑1 (MQ=255) aGCCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCAAACAGGt > 2:2064568/1‑100 (MQ=255) aGCCGGGCATGCCAGAATCCCTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCAAACAGGt > 1:1869753/1‑100 (MQ=255) gtcGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCAAACAGGTc > 2:3071197/3‑100 (MQ=255) gCCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCAAACAGGTc > 1:516868/1‑100 (MQ=255) gCCGGGCATGCCAGAATCCCTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCAAACAGGTc < 2:2247383/100‑1 (MQ=255) gCCGGGCATGCCAGAATCCCTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCAAACAGGTc > 1:2267316/1‑100 (MQ=255) cGGGCATGCCAGAATCCCTCAACGTATTGTTGAAAGATATTCGTTCGCTGTGTATCAACACCGAACTGGAAGACGAGTAATTCTCGCTCAAACAGGTc < 2:2268598/98‑1 (MQ=255) gCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCAAACAGGTCACTGCTGTc < 1:1156373/100‑1 (MQ=255) ccAGAATCCCTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCAAACAGGTCACTGCTGTCg > 2:126843/1‑100 (MQ=255) cAGAATCCTTCAGCGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCAAACAGGTCACTGCTGTCgg > 2:3422607/1‑100 (MQ=255) cAGAATCCCTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCAAACAGGTCACTGCTGTCgg > 1:1282374/1‑100 (MQ=255) aaTCCCTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCAAACAGGTCACTGCTGTCGGGtt < 2:289648/100‑1 (MQ=255) cTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCAAACAGGTCACTGCTGTCGGGTTaaaa > 2:3808802/1‑100 (MQ=255) cTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCAAACAGGTCACTGCTGTCGGGTTaaaa > 2:288447/1‑100 (MQ=255) cTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCAAACAGGTCACTGCTGTCGGGTTaaaa < 2:886503/100‑1 (MQ=255) cTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCAAACAGGTCACTGCTGTCGGGCTaaaa > 1:542979/1‑100 (MQ=255) ttCAACGTATTGTTGAAAGAGATTCGTTCGCTGAGCAGCACCATCGAACTGGAAGACGAGTAATTCTCGATCAAACAGGTCACTGCTGCCGGGCTACAAc > 2:383280/1‑100 (MQ=255) | TGCTCACCGTTAAGTCTGATGACGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTGGAAGACGAGTAATTCTCGCTCAAACAGGTCACTGCTGTCGGGTTAAAAC > NC_000913/4185113‑4185310 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |