BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_000913	780,758	T→C	100%	intergenic (+129/‑7)	lysT → / → valT	tRNA‑Lys/tRNA‑Val

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	780,758	0	T	C	100.0%	416.5 / NA	122	intergenic (+129/‑7)	lysT/valT	tRNA‑Lys/tRNA‑Val
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (57/65); total (57/65)

Only 100 of 126 total aligned reads displayed.

AAGGATAACGTTGCATGAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCACTAACATAGTTAGTTGTAGTATCCAGCGTAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCA  >  NC_000913/780661‑780837

aaGGATAACGTTGCATGAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCACTAACATAGTTAGTTGTAGTATCCAGCgcag                                                                               <  2:1382967/100‑1 (MQ=255)

  gcagaaCGTTATAGGAGGAACGTCCCGAAGGTCAACACTAATTTGTGTCATCCTGCACGACCCCCCACTAACATAGTTAGTTGTAGTATCCAGCgcag                                                                               <  2:569754/94‑1 (MQ=255)

    aTAACGTTGCATGAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCACTAACATAGTTAGTTGTAGTATCCAGCGCAGTATc                                                                           >  2:384441/1‑100 (MQ=255)

     tAACGTTGCATGAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCACTAACATAGTTAGTTGTAGTATCAAGCGCAGTATCg                                                                          >  1:1015834/1‑100 (MQ=255)

     tAACGTTGCATGAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCACTAACAACATCAGACTCAGTATCCAGCgcagta                                                                             >  2:726470/1‑97 (MQ=14)

       aCGTTGCATGAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCACTAACATAGTTAGTTGTAGTATCCAGCGCAGTATCggg                                                                        <  1:1249856/100‑1 (MQ=255)

       aCGTTGCATGAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCACTAACATAGTTAGTTGTAGTATCCAGCGCAGTATCggg                                                                        <  1:3722978/100‑1 (MQ=255)

        cGTTGCATGAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCGCTAACATAGTTAGTTGTAGTATCCTGCGCAGTATCggg                                                                        <  2:2352916/99‑1 (MQ=255)

        cGTTGCATGAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCACTAACATAGTTAGTTGTAGTATCCAGCGCAGTATCGGGt                                                                       >  1:1000354/1‑100 (MQ=255)

        cGTTGCATGAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCACTAACATAGTTAGTTGTAGTATCCAGCGCAGTATCGGGt                                                                       <  1:1932540/100‑1 (MQ=255)

        cGTTGCATGAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCACTAACATAGTTAGTTGTAGTATCCAGCGCAGTATCGGGt                                                                       >  1:593006/1‑100 (MQ=255)

          ttGCATGAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCACTAACATAGTTAGTTGTAGTATCCAGCGCAGTATCGGGTGa                                                                     <  1:3633120/100‑1 (MQ=255)

           tGCATGAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCACTAACATAGTTAGTTGTAGTATCCAGCGCAGTATCGGGTGAt                                                                    <  2:2317432/100‑1 (MQ=255)

            gCATGAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCACTAACATAGTTAGTTGTAGTATCCAGCGCAGTATCGGGTGAtt                                                                   <  1:3250154/100‑1 (MQ=255)

             cATGAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCACTCACATAGTTAGTAGAAGTATCAAGCGCCGTATAGGGAGAtt                                                                   >  2:838009/1‑99 (MQ=18)

             cATGAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCACTAACATAGTTAGTTGTAGTATCCAGCGCAGTATCGGGTGATTa                                                                  >  1:2936866/1‑100 (MQ=255)

             cATGAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCACTAACATAGTTAGTTGTAGTATCCAGCGCAGTATCGGGTGATTa                                                                  <  2:1498448/100‑1 (MQ=255)

             cATGAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCACTAACATAGTTAGTTGTAGTATCCAGCGCAGTATCGGGTGATTa                                                                  <  1:2602365/100‑1 (MQ=255)

               tGAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCACTAACATAGTTAGTTGTAGTATCCAGCGCAGTATCGGGTGATTAGc                                                                >  1:88833/1‑100 (MQ=255)

               tGAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCACTAACATAGTTAGTTGTAGTATCCAGCGCAGTATCGGGTGATTAGc                                                                <  1:3525997/100‑1 (MQ=255)

               tGAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCACTAACATAGTTAGTTGTAGTATCCAGCGCAGTATCGGGTGATTAGc                                                                <  2:1424803/100‑1 (MQ=255)

               tGAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCACTAACATAGTTAGTTGTAGTATCCAGCGCAGTATCGGGTGATTAGc                                                                <  2:824617/100‑1 (MQ=255)

                gAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCACTAACATAGTTAGTTGTAGTATCCAGCGCAGTATCGGGTGATTAGca                                                               >  1:824626/1‑99 (MQ=255)

                aaGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCACTAACATAGTTAGTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCt                                                               <  1:3434891/99‑1 (MQ=255)

                 aGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCACTAACATAGTTAGTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTc                                                              >  1:1976437/1‑100 (MQ=255)

                 aGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCACTAACATAGTTAGTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTc                                                              <  1:3734722/100‑1 (MQ=255)

                 aGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCACTAACATAGTTAGCTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTc                                                              <  2:2718542/100‑1 (MQ=255)

                 aGCAACGGCCCGAAGGGCGAGACGAAGTCGAGCCATCCTGCACGACCCACCACTAACATAGTTAGTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTc                                                              <  2:3764058/100‑1 (MQ=255)

                   cAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCACTAACATAGTTAGTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAg                                                            >  1:2036320/1‑100 (MQ=255)

                     aCGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCACTAACATAGTTAGTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCt                                                          <  1:815588/100‑1 (MQ=255)

                     aCGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCACTAACATAGTTAGTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCt                                                          >  2:1469118/1‑100 (MQ=255)

                      cGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCACTAACATAGTTAGTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTg                                                         >  1:2031877/1‑100 (MQ=255)

                       ggCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCACTAACATAGTTAGTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTgg                                                        >  1:991574/1‑100 (MQ=255)

                        gCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCACTAACATAGTTAGTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTggg                                                       >  1:3048370/1‑100 (MQ=255)

                         cccGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCACTAACATAGTTAGTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTggg                                                       >  1:1887591/1‑99 (MQ=255)

                         cccGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCACTAACATAGTTAGTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGga                                                      <  2:2346649/100‑1 (MQ=255)

                          ccGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCACTAACATAGTTAGTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGgag                                                     >  1:427671/1‑100 (MQ=255)

                           cGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCACTAACATAGTTAGTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGgaga                                                    <  1:3068866/100‑1 (MQ=255)

                           cGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCACTAACATAGTTAGTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGgaga                                                    <  1:1489212/100‑1 (MQ=255)

                             aaGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCACTAACATAGTTAGTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGc                                                  <  1:3614614/100‑1 (MQ=255)

                             aaGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCACTAACATAGTTAGTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGc                                                  <  1:3407326/100‑1 (MQ=255)

                               gggCGAGACGAAGTCGAGTCATCCTGCACGACCCACCACTAACATAGTTAGTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCAc                                                >  2:718455/1‑100 (MQ=255)

                                ggCGAGACGAAGTCGAGTCATCCTGCACGACCCACCACTAACATAGTTAGTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCAcn                                               <  2:2153006/100‑2 (MQ=255)

                                ggCGAGACGAAGTCGAGTCATCCTGCACGACCCACCACTAACATAGTTAGTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCAcc                                               >  1:2663000/1‑100 (MQ=255)

                                ggCGAGACGAAGTCGAGTCATCCTGCACGACCCACCACTAACATAGTTAGTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCAcc                                               <  2:159372/100‑1 (MQ=255)

                                 gCGAGACGAAGTCGAGTCATCCTGCACGACCCACCACTCACATAGTTAGTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCt                                              >  2:277928/1‑100 (MQ=255)

                                  cGAGACGAAGTCGAGTCATCCTGCACGACCCACCACTGATATAGTCAGATGTAGTATCCAGCGCAGTATCGGGAGATTAGCTCAGCTGCGAGTGCAc                                                >  2:2043635/1‑97 (MQ=21)

                                   gagaCGAAGTCGAGTCATCCTGCACGACCCACCACTAACATAGTTAGTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTcc                                            <  2:1081865/100‑1 (MQ=255)

                                   gagaCGAAGTCGAGTCATCCTGCACGACCCACCACTAACATAGATAGTCGTAGTATCCAGCGCAGTATCGGGAGATTAGCTCCGCGGGGAGAGCACCTcc                                            >  2:3726100/1‑100 (MQ=25)

                                    agaCGAAGTCGAGTCATCCTGCACGACCCACCACTAACATAGTTAGTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTccc                                           >  2:1821464/1‑100 (MQ=255)

                                    agaCGAAGTCGAGTCATCCTGCACGACCCACCACTAACATAGTTAGTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTccc                                           <  2:89871/100‑1 (MQ=255)

                                    agaCGAAGTCGAGTCATCCTGCACGACCCACCACTAACATAGTTAGTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTccc                                           >  1:3137387/1‑100 (MQ=255)

                                     gaCGAAGTCGAGTCATCCTGCACGACCCACCACTAACATAGTTAGTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCt                                          <  2:1318922/100‑1 (MQ=255)

                                     gaCGAAGTCGAGTCATCCTGCACGACCCACCACTAACATAGTTAGTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCt                                          >  2:3049508/1‑100 (MQ=255)

                                      aCGAAGTGGAGTCAGCCTGCACGACCCTCCACTAACGTAGTGAGTTGTAGTATCCCGCGCAGTATCGGGTGATTGGCGCAGCTGGGAGAGCACCTCCGtt                                         <  2:1147885/100‑1 (MQ=18)

                                       cGAAGTCGAGTCATCCTGCACGACCCACCACTAACATAGTTAGTTGTAGTATCCAGCGCAGTATCGGGTAATAAGCTCAGCTGGGAGAGCACCTCCCtt                                         >  1:2984543/1‑99 (MQ=255)

                                       cGAAGTCGAGTCATCCTGCACGACCCACCACTAACATAGTTAGTTGTAGTATCCAGCGCAGTATCGGGAGATTAGCTCAGCTGGGAGAGCACCTCCCTTa                                        >  1:1379754/1‑100 (MQ=255)

                                        gAAGTCGAGTCATCCTGCACGACCCACCACTAACATAGTTAGTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTAc                                       <  2:425088/100‑1 (MQ=255)

                                         aaGTCGAGTCATCCTGCACGACCCACCACTAACATAGTTAGTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACa                                      >  2:2844810/1‑100 (MQ=255)

                                         aaGTCGAGTCATCCTGCACGACCCACCACTAACATAGTTAGTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTAAGCTGGGAGAGCACCTCCCTTAcc                                      <  2:562801/100‑2 (MQ=255)

                                           gTCGAGTCATCCTGCACGACCCACCACTAACATAGTTAGTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAag                                    <  2:2804808/100‑1 (MQ=255)

                                           gTCGAGTCATCCTGCACGACCCACCACTAACATAGTTAGTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAag                                    <  2:2320246/100‑1 (MQ=255)

                                           gTCGAGTCATCCTGCACGACCCACCACTAACATAGTTAGTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAag                                    <  1:1682558/100‑1 (MQ=255)

                                              gAGTCATCCTGCACGACCCACCACTAACATAGTTAGTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAaggag                                 >  1:1922484/1‑100 (MQ=255)

                                              gAGTCATCCTGCACGACCCACCACTAACATAGTTAGTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGATGGGAGAGCACCTCCCTTACAaggag                                 >  1:316925/1‑100 (MQ=255)

                                               aGTCATCCTGCACGACCCACCACTAACATAGTTAGTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAaggagg                                <  1:3101717/100‑1 (MQ=255)

                                               aGTCATCCTGCACGACCCACCACTAACATAGTTAGTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAaggagg                                <  1:3389493/100‑1 (MQ=255)

                                                gTCATCCTGCACGACCCACCACTAACATAGTTAGTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAggg                               <  2:2616633/100‑1 (MQ=255)

                                                 tCATCCTGCACGACCCACCACTAACATAGTTCGTTGTATTATCCAGCGCAGTATCGGGTGATTAGCCCAGCTGGGCGAGCACCTCCCTTACAAGGAggg                               >  2:453969/1‑99 (MQ=18)

                                                 tCATCCTGCACGACCCACCACTAACATAGTTAGTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAgggg                              <  1:968559/100‑1 (MQ=255)

                                                 tCATCCTGCACGACCCACCACTAACATAGATAGTTGTAGTATCCAGCGCAGTATCGAGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAaggagg                                >  2:515195/1‑98 (MQ=255)

                                                  cATCCTGCACGACCCACCACTAACATAGTTAGTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAggggg                             >  1:742040/1‑100 (MQ=255)

                                                  cATCCTGCACGACCCACCACTAACATAGTTAGTTGTACTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCCCCTCCCTTACAAGGAggggg                             >  2:2039194/1‑100 (MQ=255)

                                                   aTCCTGCACGACCCACCACTAACATAGTTAGTCGTCGTCTCCAGCGCACTATCGTATGATTAGCTCAGCTGGGAGACCACCTCCCTTACAAGGAggggg                             >  2:689162/1‑99 (MQ=18)

                                                       tGCACGACCCACCACTAACATAGTTAGTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTc                           >  2:3191841/1‑97 (MQ=255)

                                                          aCGACCCACCACTAACAGAGTTAGTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCGGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGt                     <  2:3124321/100‑1 (MQ=255)

                                                           cGACCCACCACTAACATAGTTAGTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGtt                    >  1:3060567/1‑100 (MQ=255)

                                                            gACCCACCACTAACATAGTTAGTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTc                   <  1:1762468/100‑1 (MQ=255)

                                                            gACCCACCACTAACATAGTTAGTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTc                   <  2:2942695/100‑1 (MQ=255)

                                                             aCCCACCACTAACATAGTTAGTTGTAGTATGCATCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGCCGGCGGTTCg                  >  2:2511262/1‑100 (MQ=17)

                                                               ccaccaCTAACATAGTTAGTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGAt                <  1:2774938/100‑1 (MQ=255)

                                                                caccacTAACATAGTTAGTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGAt                >  1:2615999/1‑99 (MQ=255)

                                                                caccacTAACATAGTTAGTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATc               <  1:158319/100‑1 (MQ=255)

                                                                caccacTAACATAGTTAGTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATc               <  2:2949305/100‑1 (MQ=255)

                                                                caccacTAACATAGTTAGTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATc               >  2:2565080/1‑100 (MQ=255)

                                                                caccacTAACATAGTTAGTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATc               <  2:2797212/100‑1 (MQ=255)

                                                                 nccacTAACATAGTTAGTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATcc              >  2:667235/2‑100 (MQ=255)

                                                                 accacTAACATAGTTAGTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATcc              <  1:626760/100‑1 (MQ=255)

                                                                   cacTAACATAGTTAGTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCg            <  1:1377828/100‑1 (MQ=255)

                                                                   cacTAACATAGTTAGTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCg            <  2:1702762/100‑1 (MQ=255)

                                                                    acTAACATAGTTAGTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGt           <  1:2559822/100‑1 (MQ=255)

                                                                    acTAACATAGTTAGTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGt           >  1:1741755/1‑100 (MQ=255)

                                                                    acTAACATAGTTAGTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGt           >  1:2799105/1‑100 (MQ=255)

                                                                    acTAACATAGTTAGTTGTAGTATCCAACGCAGTACCGGGCGATTAACTCAGCTCCCAGAGCACCCCCCTAACCAGGAGGGAGTCGGCGGTTCGATCCCGt           <  2:3044250/100‑1 (MQ=14)

                                                                      tAACATAGTTAGTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGtca         >  1:1052407/1‑100 (MQ=255)

                                                                         cATAGTTAGTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGtcatca      >  1:2396909/1‑100 (MQ=25)

                                                                         cATAGTTAGTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGtcatca      <  2:2095443/100‑1 (MQ=25)

                                                                         cATAGTTAGTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGtca         <  1:1348288/97‑1 (MQ=25)

                                                                             gttagttGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCGCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATcaccca  >  2:2679888/1‑100 (MQ=2)

                                                                             gttagttGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATcaccca  >  1:2352098/1‑100 (MQ=11)

AAGGATAACGTTGCATGAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCACTAACATAGTTAGTTGTAGTATCCAGCGTAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCA  >  NC_000913/780661‑780837

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`