Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_000913 | 4,548,150 | A→G | 25.8% | T137A (ACG→GCG) | fimF → | minor component of type 1 fimbriae |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 4,548,150 | 0 | A | G | 25.8% | 220.8 / 95.9 | 144 | T137A (ACG→GCG) | fimF | minor component of type 1 fimbriae |
Reads supporting (aligned to +/- strand): ref base A (68/38); new base G (19/18); total (87/57) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.78e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.17e-01 |
Only 100 of 148 total aligned reads displayed.
AAAATACGGTGTCAGCGGCTTCGGGACTGGGAATACAGCTTCTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAACCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCATATCAATGCCACGGC > NC_000913/4548052‑4548247 | aaaaTACGGTGTCAGCGGCTTCGGGACTGGGAATACAGCTTCTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGgac < 2:2985423/100‑1 (MQ=255) aaaaTACGGTGTCAGCGGCTTCGGGACTGGGAATACAGCTTCTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGgac < 2:1861402/100‑1 (MQ=255) aaaTACGGTGTCAGCGGCTTCGGGACTGGGAATACAGCTTCTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGgacg < 1:3745856/100‑1 (MQ=255) aaTACGGTGTCAGCGGCTTCGGGACTGGGAATACAGCTTCTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGggcga > 2:2153659/1‑100 (MQ=255) tACGGTGTCAGCGGCTTCGGGACTGGGAATACAGCTTCTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGAcc > 2:1606665/1‑100 (MQ=255) aCGGTGTCAGCGGCTTCGGGACTGGGAATACAGCTTCTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGGCGAccc < 1:2984970/100‑1 (MQ=255) aCGGTGTCAGCGGCTTCGGGACTGGGAATACAGCTTCTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGGCGAccc < 1:3370822/100‑1 (MQ=255) aCGGTGTCAGCGGCTTCGGGACTGGGAATACAGCTTCTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGAccc < 2:1360510/100‑1 (MQ=255) aCGGTGTCAGCGGCTTCGGGACTGGGAATACAGCTTCTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGAccc < 1:3727956/100‑1 (MQ=255) cGGTGTCAGCGGCTTCGGGACTGGGAATACAGCTTCTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCt < 2:1323948/100‑1 (MQ=255) cGGTGTCAGCGGCTTCGGGACTGGGAATACAGCTTCTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCt > 2:369316/1‑100 (MQ=255) gtgtCAGCGGCTTCGGGACTGGGAATACAGCTTCTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGa > 2:686473/1‑100 (MQ=255) tgtCAGCGGCTTCGGGACTGGGAATACAGCTTCTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGAc < 1:3370982/100‑1 (MQ=255) gtCAGCGGCTTCGGGACTGGGAATACAGCTTCTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGGCGACCCTGACg > 1:724556/1‑100 (MQ=255) gtCAGCGGCTTCGGGACTGGGAATACAGCTTCTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACg < 1:1731148/100‑1 (MQ=255) cAGCGGCTTCGGGACTGGGAATACAGCTTCTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGcc > 1:1813935/1‑100 (MQ=255) cAGCGGCTTCGGGACTGGGAATACAGCTTCTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGcc > 1:965367/1‑100 (MQ=255) cAGCGGCTTCGGGACTGGGAATACAGCTTCTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGcc > 2:481358/1‑100 (MQ=255) gCGGCTTCGGGACTGGGAATACAGCTTCTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCgg > 1:1533749/1‑100 (MQ=255) ggCTTCGGGACTGGGAATACAGCTTCTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGt > 1:3503471/1‑100 (MQ=255) ggCTTCGGGACTGGGAATACAGCTTCTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACACTGACGCCGGGt > 1:1268885/1‑100 (MQ=255) cTTCGGGACTGGGAATACAGCTTCTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTaa > 1:354990/1‑100 (MQ=255) cTTCGGGACTGGGAATACAGCTTCTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTaa > 2:902879/1‑100 (MQ=255) cggaattGGGAATACGGCCTCTCTATGAGCAGCAAAATCAATTACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAAc < 2:2396462/93‑1 (MQ=255) gggACTGGGAATACAGCTTCTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAACCa > 1:2498867/1‑100 (MQ=255) gggACTGGGAATACAGCGTCTGAATGAGCAGCAAAATCAAATACGCCTTAATGCTCCATCGTCCGCGCGTTCGTGGACGACCATGACGCCAGGTAAACCa > 2:1980645/1‑100 (MQ=255) gACTGGGAATACAGCTTCTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAAcc < 2:432021/97‑1 (MQ=255) aCTGGGAATACAGCTTCTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAACCAAAt < 2:1015917/100‑1 (MQ=255) aCTGGGAATACAGCTTCTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAACCAAAt < 2:1551002/100‑1 (MQ=255) cTGGGAATACAGCTTCTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAACCAAATa > 2:3817431/1‑100 (MQ=255) cTGGGAATACAGCTTCTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAACCAAATa > 2:1762912/1‑100 (MQ=255) cTGGGAATACAGCTTCTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCAGGTAAACCAAATa > 1:354192/1‑100 (MQ=255) gggAATACAGCTTCTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGGCGACCCTGACGCCGGGTAAACCAAATACg > 1:3554134/1‑100 (MQ=255) gggAATACAGCTTCTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAACCAAATACg > 1:3013982/1‑100 (MQ=255) ggAATACAGCTTCTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAACCAAATACGc > 2:549263/1‑100 (MQ=255) tACAGCTTCTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGGCGACCCTGACGCCGGGTAAACCAAATACGCTGaa > 1:1139439/1‑100 (MQ=255) tACAGCTTCTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGGCGACCCTGACGCCGGGTAAACCAAATACGCTGaa > 1:2851889/1‑100 (MQ=255) tACAGCTTCTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAACCAAATACGCTGaa > 1:80141/1‑100 (MQ=255) cAGCTTCTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGGCGACCCTGACGCCGGGTAAACCAAATACGCTGAAtt < 2:3391280/100‑1 (MQ=255) cAGCTTCTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAACCAAATACGCTGAAtt > 1:715499/1‑100 (MQ=255) cAGCTTCTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAACCAAATACACTGAAtt > 1:1267173/1‑100 (MQ=255) aGCTTCTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGGCGACCCTGACGCCGGGTAAACCAAATACGCTGAAttt < 2:3481248/100‑1 (MQ=255) gCTTCTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAACCAAATACGCTGAAtttt > 2:2018408/1‑100 (MQ=255) cTTCTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGGCGACCCTGACGCCGGGTAAACCAAATACGCTGAAttttt > 2:1449187/1‑100 (MQ=255) ttCTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGGCGACCCTGACGCCGGGTAAACCAAATACGCTGAATTTTTa < 1:1876158/100‑1 (MQ=255) cTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAACCAAATACGCTGAATTTTTACg > 2:1231043/1‑100 (MQ=255) tGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGGCGACCCTGACGCCGGGTAAACCAAATACGCTGAATTTTTACGc > 1:1003717/1‑100 (MQ=255) tGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAACCAAATACGCTGAATTTTTACGc > 1:2238528/1‑100 (MQ=255) gAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAACCAAATACGCTGAATTTTTACGcc > 1:800015/1‑100 (MQ=255) aTGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGGCGACCCTGACGCCGGGTAAACCAAATACGCTGAATTTTTACGCCCg > 2:1065586/1‑100 (MQ=255) tGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAACCAAATACGCTGAATTTTTACGCCCgg > 1:2901570/1‑100 (MQ=255) gAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGGCGACCCTGACGCCGGGTAAACCAAATACGCTGAATTTTTACGCCCGGc < 1:1411777/100‑1 (MQ=255) gAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAACCAAATACGCTGAATTTTTACGCCCGGc < 1:323254/100‑1 (MQ=255) gcagcaAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAACCAAATACGCTGAATTTTTACGCCCGGCTa > 1:2783707/1‑100 (MQ=255) cagcaAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGGCGACCCTGACGCCGGGTAAACCAAATACGCTGAACTTTTACGCCCGGCTaa > 2:3723089/1‑100 (MQ=255) agcaAAATTAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAACCAAATACGCTGAATTTTTACGCCCGGCTAAt > 2:2867165/1‑100 (MQ=255) agcaAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAACCAAATACGCTGAATTTTTACGCCCGGCTAAt > 2:3195128/1‑100 (MQ=255) agcaAAATCAAATACCCCTTAATGCTACATCCTCCGCGCTCTCGTGGACGACCTTGAAGCGGGGTAAACGAAATAGGTTGAATTTTTACGCCCGGATAAt > 2:1990719/1‑100 (MQ=255) gcaAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAACCAAATACGCTGAATTTTTACGCCCGGCTAATg > 2:424407/1‑100 (MQ=255) caAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAACCAAATACGCTGAATTTTTACGCCCGGCTAATg > 2:346422/1‑99 (MQ=255) aaTCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAACCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGa < 2:3288197/100‑1 (MQ=255) aTCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGGCGACCCTGACGCCGGGTAAACCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGac > 1:1954476/1‑100 (MQ=255) aTCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGGCGACCCTGACGCCGGGTAAACCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGac < 1:2695409/100‑1 (MQ=255) aTCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGCCGACCCTGACGCCGGGTAAACCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGac < 2:1951332/100‑1 (MQ=255) aTCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAACCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGac < 2:136550/100‑1 (MQ=255) aTCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAACCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGac > 1:2467278/1‑100 (MQ=255) tctagtACCCCATAATCCCCCATCTTTCCCGCTTTCGTGGACGACCCTGACGCCGCGTAAACCAAATACGCTTAATATTAACGCACGCCTAATGGc < 2:3809164/91‑1 (MQ=255) aTACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGGCGACCCTGACGCCGGGTAAACCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAgg < 1:1014242/100‑1 (MQ=255) aTACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAACCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAgg > 1:1777060/1‑100 (MQ=255) aCCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGGCGACCCTGACGCCGGGTAAACCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTg > 2:249834/1‑100 (MQ=255) aCCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAACCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTg < 1:1718737/100‑1 (MQ=255) ccTTAATGCTCCATCGTCCGCGCTTTCGTGGGCGACCCTGACGCCGGGTCAACCAACTACGCTGAATTTTTACGCCCGGCTAATGGCGACACAAGTGCCt > 2:3291945/1‑100 (MQ=255) ccTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAACCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCt > 2:3050288/1‑100 (MQ=255) ccTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAACCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCt > 1:2263847/1‑100 (MQ=255) cTTAATGCTCCATCGTCCGCGCTTTCGTTGACGACCCTGACGCCGGGTAAACCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTg > 2:3819311/1‑100 (MQ=255) tAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAACCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGt < 1:1112985/99‑1 (MQ=255) gCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAACCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTg > 1:2801159/1‑100 (MQ=255) gCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAACCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTg > 1:1024954/1‑100 (MQ=255) cTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAACCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGc < 1:1189664/100‑1 (MQ=255) tCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAACCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCg > 2:2764496/1‑100 (MQ=255) cATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAACCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCggg < 1:3208116/100‑1 (MQ=255) cATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAACCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCggg < 1:2769197/100‑1 (MQ=255) cATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAACCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCggg < 1:1558618/100‑1 (MQ=255) tCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAACCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGc > 1:1218247/1‑100 (MQ=255) gTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAACCCAAATCCGCTGAATTTTTACACCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCa > 2:2173676/1‑99 (MQ=255) gTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAACCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCat > 2:924826/1‑100 (MQ=255) tCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAACCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCata > 2:3370653/1‑100 (MQ=255) tCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAACCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCata > 1:1850307/1‑100 (MQ=255) cgcgCTTTCGTGGGCGACCCTGACGCCGGGTAAACCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCATATc < 1:2153673/100‑1 (MQ=255) cgcgCTTTCGTGGGCGACCCTGACGCCGGGTAAACCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCATATc < 2:2717360/100‑1 (MQ=255) cTTTCGTGGACGACCCTGACGCCGGGTAAACCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCATATCACTg > 2:1744957/1‑100 (MQ=255) cTTTCGTGGACGACCCTGACGCCGGGTAAACCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCATATCAATg < 2:1102855/100‑1 (MQ=255) tttCGTGGGCGACCCTGACGCCGGGTAAACCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCATATCAATGc > 1:202367/1‑100 (MQ=255) ttCGTGGACGACCCTGACGCCGGGTAAACCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACCCAGGTGCCTGTCACTGCGGGGCATATCAATGcc < 2:1075846/100‑1 (MQ=255) tCGTGGACGACCCTGACGCCGGGTAAACCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCATATCAATGCCa < 2:666320/100‑1 (MQ=255) cGTGGGCGACCCTGACGCCGGGTAAACCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCATATCAATGCCAc < 1:196216/100‑1 (MQ=255) gTGGGCGACCCTGACGCCGGGTAAACCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCATATCAATGCCACg < 2:3791607/100‑1 (MQ=255) tGGACGACCCTGACGCCGGGTAAACCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCATATCAATGCCACgg < 1:1345506/100‑1 (MQ=255) ggACGACCCTGACGCCGGGTAAACCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCATATCAATGCCACGGc < 1:2531276/100‑1 (MQ=255) ggACGACCCTGACGCCGGGTAAACCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCATATCAATGCCACGGc > 2:2332224/1‑100 (MQ=255) | AAAATACGGTGTCAGCGGCTTCGGGACTGGGAATACAGCTTCTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAACCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCATATCAATGCCACGGC > NC_000913/4548052‑4548247 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |