| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,549,932 | T→A | 15.1% | intergenic (+222/+21) | fimH → / ← gntP | minor component of type 1 fimbriae/fructuronate transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,549,932 | 0 | T | A | 15.1% | 499.3 / 61.1 | 184 | intergenic (+222/+21) | fimH/gntP | minor component of type 1 fimbriae/fructuronate transporter |
| Reads supporting (aligned to +/- strand): ref base T (74/81); new base A (10/18); total (85/99) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.04e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 189 total aligned reads displayed.
CTTTGCTGGTCTGTTCCCCTCACCCTAACCCTCTCCCCGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAGCACAATAATCAGCCCAACCACGGAGTTGACCAGCTCCAGCAGACCCCAGGTTTTC > NC_000913/4549833‑4550031 | cTTTGCTGGTCTGTTCCCCTCACCCTAACCCTCTCCCCGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCAt < 2:3112550/100‑1 (MQ=255)cTTTGCTGGTCTGTTCCCCTCACCCTAACCCTCTCCCCGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCAt < 1:553201/100‑1 (MQ=255) cTGGTCTGTTCCCCTCACCCTAACCCTCTCCCCGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCa < 2:443767/100‑1 (MQ=255) cTGGTCTGTTCCCCTCACCCTAACCCTCTCCCCGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCa > 1:2859405/1‑100 (MQ=255) cTGGTCTGTTCCCCTCACCCTAACCCTCTCCCCGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCa < 1:2827696/100‑1 (MQ=255) tGGTCTGTTCCCCTCACCCTAACCCTCTCCCCGGAGGGGCGAGGGTACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAg < 2:1787414/100‑1 (MQ=255) ggTCTGTTCCCCTCACCCTAACCCTCTCCCCGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAgg > 1:2103993/1‑100 (MQ=255) ggTCTGTTCCCCTCACCCTAACCCTCTCCCCGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCAATGGCAgg < 2:3239064/100‑1 (MQ=255) ggTCTGTTCCCCTCACCCTAACCCTCGCCCCGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAgg < 2:3338261/100‑1 (MQ=255) cTGTTCCCCTCACCCTAACCCTCTCCCCGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAGGctc < 1:2406563/100‑1 (MQ=255) cTGTTCCCCTCACCCTAACCCTCTCCCCGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCAATGGCAGGctc < 1:1431509/100‑1 (MQ=255) tgtgCCCCTTACCCTAACCCTCTCCCCAGATGAGCGAGAGGATTGTCCGTGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCAATGGCAGGctca < 2:2961450/100‑2 (MQ=25) tgtgCCCCTCACCCTAAGCATCTCCCCGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACGTTGTCATCAGTCTGCGCCTGGCAATGGCAGGctca < 2:2340331/100‑2 (MQ=21) tGTTCCCCTCACCCTAACCCTCTCCCCGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCAATGGCAGGctca < 1:1025648/100‑2 (MQ=255) gtgcacttCACGCTAGCCCTCTGCCAAGAGGGCCGATGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGGCTGAGCCTGCCAATGGCAGGctcag < 2:2210144/93‑3 (MQ=255) gTTCCCCTCACCCTAGCCCTCTCCCCGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCAGAGCCTGCCAATGGCAGGctcag < 1:3768982/100‑3 (MQ=37) gTTCCCCTCACCCTAACCCTCTCCTCGGATGTGCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCAATGGCAGGctcag < 2:1894652/100‑3 (MQ=37) gTTCCCCTCACCCTAACCCTCTCCCCGGAGGGTCGAGGGGAGTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCAATGGCAGGctcag < 2:3197431/100‑3 (MQ=37) gTTCCCCTCACCCTAACCCTCTCCCCGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCAATGGCAGGctcag < 1:1779680/100‑3 (MQ=255) gTTCCCCTCACCCTAACCCTCTCCCCGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCAATGGCAGGctcag < 1:3377421/100‑3 (MQ=255) gTTCCCCTCACCCTAACCCTCTCCCCGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCAATGGCAGGctcag < 1:1545473/100‑3 (MQ=255) gTTACCCTCACCCTAACCCTCTTCCCGGAGGGGCGAGGGGACTGGCCGGGCACATTTGTAGACTTTGTCATCAGTCTGAGCCTGCCAATGGCAGGctcag < 2:2264207/100‑3 (MQ=25) ttCCCCTCACCCTAACCCTCTCCCCGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTgg < 1:878686/100‑1 (MQ=255) tCCCCTCACCCTAACCCTCTCCCCGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGgt < 1:3095865/100‑1 (MQ=255) tCCCCTCACCCTAACCCTCTCCCCGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGgt < 1:61350/100‑1 (MQ=255) cccTCACCCTAACCCTCTCCCCGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGgtgt > 2:3554923/1‑100 (MQ=255) ccTCACCCTAACCCTCTCCCCGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTc < 1:244566/100‑1 (MQ=255) cTCACCCTAACCCTCTCCCCGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTcc < 1:3577338/100‑1 (MQ=255) cTCACCCTAACCCTCTCCCCGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCAATGGCAGGctcagac < 2:3338807/96‑5 (MQ=255) aCCCTAACCCTCTCCCCGGAGGGGGGAGGGGATTGTCCGGGTACATTTTTAGACTTTGTCATCAGTCTGATCCTGCCATTGGCAGGCTCTGGTGTCCtt < 2:158547/99‑1 (MQ=38) cccTAACCCTCTCCCCGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCtttt < 1:2208957/100‑1 (MQ=255) cccTAACCCTCTCCCCGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCtttt > 1:2799466/1‑100 (MQ=255) ccTAACCCTCTCCCCGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTa < 1:2753322/100‑1 (MQ=255) ccTAACCCTCTCCCCGGAGGGGCGAGGCGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTa < 2:2127302/100‑1 (MQ=255) cTAACCCTCTCCCCGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTAc < 2:34803/100‑1 (MQ=255) cTAACCCTCTCCCCGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTAc < 1:2026419/100‑1 (MQ=255) cTAACCCTCTCCCCGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTAc > 1:2948555/1‑100 (MQ=255) tgaCCCTCTCCCCGGAGGGGCGATGGCACTGTACGGGCACATTTTTAGACTTTGTCCTCAGTCTGAGCCTGCCATTGGCAGGCTCTGTTGTCCTTTTAc < 2:3088223/97‑1 (MQ=255) aaCCCTCTCCCCGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGCTGTCCTTTTACg < 1:2504183/99‑1 (MQ=255) aCCCTCTCCCCGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCt < 2:125593/100‑1 (MQ=255) ccTCTCCCCGGATGGGCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTAc < 1:2379943/100‑1 (MQ=255) ctctCCCCGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTAcc < 1:1584447/100‑1 (MQ=255) ctctCCCCGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTAcc < 1:3379065/100‑1 (MQ=255) tctcCCCGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCa < 1:139239/100‑1 (MQ=255) tctcCCCGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCa < 1:1346198/100‑1 (MQ=255) ccccGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGc < 2:2844965/100‑1 (MQ=255) ccccGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGc < 1:1895294/100‑1 (MQ=255) cccGGAGGGGCGAGGGGGCTGTCCGGGCACATTTTTAGACTGTGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGGTGGCCTTTTACGCTACCATGCt > 2:2276639/1‑100 (MQ=255) cccGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCt > 1:1837992/1‑100 (MQ=255) cccGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCt < 1:684009/100‑1 (MQ=255) ggAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCtaat > 1:380341/1‑100 (MQ=255) ggCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATATTCa < 1:2651440/100‑1 (MQ=255) gCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAg < 1:1230677/100‑1 (MQ=255) gCGAGGGGACTGTCCGGGCACATTTTTAGACTTGGTCATCAGTCTGAGCCTGCCATTTGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAg < 2:500714/100‑1 (MQ=255) cGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAg < 2:2428419/99‑1 (MQ=255) gAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAGca > 2:1661365/1‑100 (MQ=255) ggggACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTCGACGCGACCATGGTAATAATCAGcaca < 2:1656730/100‑1 (MQ=255) aCTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAGCACaataa < 1:2962083/100‑1 (MQ=255) aCTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAGCACaataa > 1:3223274/1‑100 (MQ=255) cTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAGCACaataat > 2:2238489/1‑100 (MQ=255) gTCCGGGCACATATTTAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCCTGCTAATAACCAGAACAATAATCa > 2:3025557/1‑100 (MQ=255) gggCACATTTTTAGACTTTGTCATCAGTCTGAGGCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAGCACAATAATCAGccc < 1:792028/100‑1 (MQ=255) cacaTTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAGCACAATAATCAGCCCAAc > 1:31266/1‑100 (MQ=255) aTTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAGCACAATAATCAGCCCAACCAc < 1:2968490/100‑1 (MQ=255) ttttAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAGCACAATAATCAGCCCAACCACgg < 1:1853104/100‑1 (MQ=255) ttAGGCTTTGTCATCAGTCTGAACCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATTCTAATAATCAGCACTATAATCAGCCCAAcc > 2:3425998/1‑94 (MQ=255) ttAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAGCACAATAATCAGCCCAACCACGGAg < 1:500752/100‑1 (MQ=255) tAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAGCACAATAATCAGCCCAACCACGGAGt < 1:424497/100‑1 (MQ=255) gACTTTGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAGCACAATAATCAGCCCAACCACGGAGTTg < 1:3515270/100‑1 (MQ=255) gACTTTGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAGCACAATAATCAGCCCAACCACGGAGTTg < 2:637110/100‑1 (MQ=255) aCTTTGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAGCACAATAATCAGCCCAACCACGGAGTTGa < 2:3592068/100‑1 (MQ=255) cTTTGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAGCACAATAATCAGCCCAACCACGGAGTTGAc < 1:1181946/100‑1 (MQ=255) gatgacaaaGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAGCACAATAATCAGCCCAACCACGGAGTTGACCa > 2:2729266/9‑100 (MQ=255) tGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAGCACAATAATCAGCCCAACCACGGAGTTGACCAg < 1:1743237/100‑1 (MQ=255) gTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAGCACAATAATCAGCCCAACCACGGAGTTGACCAGc > 2:1916344/1‑100 (MQ=255) gTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAGCACAATAATCAGCCCAACCACGGAGTTGACCAGc < 1:3624521/100‑1 (MQ=255) tcatcaGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAGCACAATAATCAGCGCAACCACGGAGTTGACCAGCt < 2:1361651/100‑1 (MQ=255) atcaGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAGCACAATAATCAGCCCAGCCACGGAGTTGACCAGCTcc > 1:2080702/1‑100 (MQ=255) tcaGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAGCACAATAATCAGCCCAACCACGGAGTTGACCAGCTCca > 1:1938938/1‑100 (MQ=255) tcaGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAGCACAATAATCAGCCCAACCACGGAGTTGACCAGCTCca < 2:1131828/100‑1 (MQ=255) caGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAGCACAATAATCAGCCCAACCACGGAGTTGACCAGCTCcag > 1:2230279/1‑100 (MQ=255) caccagAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAGCACAATAATCAGCCCAACCACGGAGTTGACCAGCTCcagc > 1:1073370/6‑100 (MQ=255) caccagAGCCTGCCAATGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAGCACAATAATCAGCCCAACCACGGAGTTGACCAGCTCcagc > 1:2149923/6‑100 (MQ=255) aGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGATAATAATAAGCACAATAATCAGAACAACCACGGAGATGACCAGCTCaagc > 2:936122/1‑100 (MQ=255) gTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAGCACAACAATCAGCCCAACCACGGAGTTGACCAGCTCcagca > 1:255615/1‑100 (MQ=255) tCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAGCACAATAATCAGCCCAACCACGGAGTTGACCAGCTCcagcag > 1:1043292/1‑100 (MQ=255) cTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAGCACAATAATCAGCCCAACCACGGAGTTGACCAGCTCCAGCAGa > 2:2529233/1‑100 (MQ=255) agAGCCTGCCAATGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAGCACAATAATCAGCCCAACCACGGAGTTGACCAGCTCCAGCAGAc > 2:3663363/2‑100 (MQ=255) gAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAGCACAATAATCAGCCCAACCACGGAGTTGACCAGCTCCAGCAGAcc > 1:3254884/1‑100 (MQ=255) gAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAGCACAATAATCAGCCCAACCACGGAGTTGACCAGCTCCAGCAGAcc < 2:1746262/100‑1 (MQ=255) gAGCCTGCCAATGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAGCACAATAATCAGCCTAACCACGGAGTTGACCAGCTCCAGCAGAcc > 1:3312746/1‑100 (MQ=255) gAGCCTGCCAATGGCAGGCTCTGGTGTCCTTTTACGCTACCAAGCTAATAATCAGCACAATAATCAGCCCAACCACGGAGTTGACAAGCTACAGCAGAc > 2:785919/1‑99 (MQ=255) aGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAGCACAATAATCAGCCCAACCACGGAGTTGACCAGCTCCAGCAGAccc > 2:332550/1‑100 (MQ=255) gCCTGCCATTGGTAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAGCACAATAATCAGCCCAACCACGGAGTTGACCAGCTCCAGCAGAcccc > 1:2494558/1‑100 (MQ=255) gCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAGCACAATAATCAGCCCAACCACGGAGTTGACCAGCTCCAGCAGAcccc > 2:3315532/1‑100 (MQ=255) gCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAGCACAATAATCAGCCCAACCACGGAGTTGACCAGCTCCAGCAGAcccc < 1:1010670/100‑1 (MQ=255) ccTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAGCACAATAATCAGCCCAACCACGGAGTTGACCAGCTCCAGCAGACCCCa < 1:3286816/100‑1 (MQ=255) cTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAGCACAATAATCAGCCCAACCACGGAGTTGACCAGCTCCAGCAGACCCCAg > 2:2397870/1‑100 (MQ=255) cTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAGCACAATAATCAGCCCAACCACGGAGTTGACCAGCTCCAGCAGACCCCAg > 1:3034522/1‑100 (MQ=255) ccATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAGCACAATAATCAGCCCAACCACGGAGTTGACCAGCTCCAGCAGACCCCAGGtt > 1:2179183/1‑100 (MQ=255) | CTTTGCTGGTCTGTTCCCCTCACCCTAACCCTCTCCCCGGAGGGGCGAGGGGACTGTCCGGGCACATTTTTAGACTTTGTCATCAGTCTGAGCCTGCCATTGGCAGGCTCTGGTGTCCTTTTACGCTACCATGCTAATAATCAGCACAATAATCAGCCCAACCACGGAGTTGACCAGCTCCAGCAGACCCCAGGTTTTC > NC_000913/4549833‑4550031 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |