| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 887,392 | T→A | 17.8% | intergenic (‑53/‑31) | ybjJ ← / → rcdA | putative drug efflux MFS transporter, inner membrane protein/transcriptional regulator of csgD and ybiJI; autoregulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 887,392 | 0 | T | A | 17.8% | 341.5 / 64.9 | 146 | intergenic (‑53/‑31) | ybjJ/rcdA | putative drug efflux MFS transporter, inner membrane protein/transcriptional regulator of csgD and ybiJI; autoregulator |
| Reads supporting (aligned to +/- strand): ref base T (67/53); new base A (14/12); total (81/65) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.78e-01 | |||||||||||
Only 100 of 152 total aligned reads displayed.
GCCCAGGTTCGGCGTTTCAATGCATTACGTGAAGAATTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACGATCCGCAACGGCGAGAAAAAATTATCCAGGCCACGCTGGAGGCGGTGAAAC > NC_000913/887293‑887489 | gcCCAGGTTCGGCGTTTCAATGCATTACGTGAAGAATTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACAt > 1:1344366/1‑100 (MQ=255) cccAGGTTCGGCGTTTCAATGCATTACGTGAAGAATTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGGAGACAACATTAGCAAGGTTGTGTACAtt > 1:2698777/1‑100 (MQ=255) ccAGGTTCGGCGTTTCAATGCATTACGTGAAGAATTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACAttt > 2:183209/1‑100 (MQ=255) ccAGGTTCGGCGTTTCAATGCATTACGTGAAGAATTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACAttt > 1:2483034/1‑100 (MQ=255) cAGGTTCGGCGTTTCAATGGAATAAGTGAAGAATTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACTACATTAGCAAGGTTGTGTACAt < 2:2215544/97‑1 (MQ=255) cAGGTTCGGCGTTTCAATGCATTACGTGAAGAATTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGGTGTGTACATTTg > 1:3625409/1‑100 (MQ=255) ggTTCGGCGTTTCAATGCATTACGTGAAGAATTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTa < 1:3276601/100‑1 (MQ=255) tCGGCGTTTCAATGCATTACGTGAAGAATTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTacac > 2:2611087/1‑100 (MQ=255) tCGGCGTTTCAATGCATTACGTGAAGAATTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTacac < 1:3491141/100‑1 (MQ=255) ggCGTTTCAATGCATTACGTGAAGAATTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACAAATGTACACaa < 1:3689052/100‑1 (MQ=255) gCGTTTCAATGCATTACGTGAAGAATTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACAAATGTACACaac < 2:679600/100‑2 (MQ=255) gCGTTTCAATGCATTACGTGAAGAATTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACAAATGTACACaac < 2:425743/100‑2 (MQ=255) gCGTTTCAATGCATTACGTAAAGAATTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGTCAACATTAGCAAGGTTGTGTACAAATGTACACaac < 1:989048/100‑2 (MQ=255) cGTTTCAATGCATTACGTGAAGAATTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACAAATGTACACaacc < 1:2160624/100‑3 (MQ=255) gTTTCAATGCATTACGTGAAGAATTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACAAATGTACACaacct < 2:574035/100‑4 (MQ=255) gTTTCAATGCATTACGTGAAAAATTTACGGTCATAGATCACGTCAAAAGAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACAAATGTACACaac < 2:570502/98‑2 (MQ=255) tttCAATGCATTACGTGAAGAATTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTg > 1:105942/1‑99 (MQ=255) ttCAATGCATTACGTGAAGAATTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCa < 2:733133/100‑1 (MQ=255) tCAATGCATTACGTGAAGAATTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCag > 2:2896018/1‑100 (MQ=255) cAATGCATTACGTGAAGAATTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCaga < 1:2814725/100‑1 (MQ=255) aTGCATTACGTGAAGAATTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCagaga < 1:540422/100‑1 (MQ=255) tGCATTACGTTAAGAGTTTTCGGTCAGATATCACGTCAAAATAAGAAGAGGTAAGACAACATTAGCAAGGGTGTGTACAAATGTACACaacctttc < 2:1315043/96‑7 (MQ=255) attcgcccatGAAGAATTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCagagag < 1:837438/91‑1 (MQ=255) gCATTACGTGAAGAATTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCagagaga > 1:3210907/1‑100 (MQ=255) cATTACGTGAAGAATTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCagagagag < 2:1767789/100‑1 (MQ=255) aTTACGTGAAGAATTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCagagagag > 2:1083779/1‑99 (MQ=255) aTTACGTGAAGAATTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAgg > 1:2469710/1‑100 (MQ=255) cGTGAAGAATTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAAt > 1:815300/1‑100 (MQ=255) gTGAAGAATTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATg < 2:3489946/100‑1 (MQ=255) gTGAAGAATTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATg > 1:2240945/1‑100 (MQ=255) gTGAAGAATTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATg < 2:3132169/100‑1 (MQ=255) tGAAGAATTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGa > 2:2171782/1‑100 (MQ=255) tGAAGAATTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGa > 2:2412907/1‑100 (MQ=255) gaagagTTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGAc > 1:859635/1‑100 (MQ=255) gaagaaTTTACGGTCATAGATCACGTCAACATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATg < 2:3807637/98‑1 (MQ=255) gaagaaTTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGAc < 1:936423/100‑1 (MQ=255) gaagaaTTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGAc > 2:1429165/1‑100 (MQ=255) gaagaaTTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGAc > 1:3122989/1‑100 (MQ=255) gaagaaTTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGAc > 2:1086351/1‑100 (MQ=255) aagtaTTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGAAAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGACa < 1:127152/100‑1 (MQ=255) aagaaTTTACGGTCATAGATCACGTCAAAATAAGAAGCGGGAAGACAACCTTAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGa < 1:173800/98‑1 (MQ=255) aagaaTTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGACa > 1:3317788/1‑100 (MQ=255) agaaTTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATGAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGACAt < 2:2447188/100‑1 (MQ=255) gaaTTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGACATg < 1:98221/100‑1 (MQ=255) ttACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGACATGCGTc < 1:1305101/100‑1 (MQ=255) tACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGACATGCGTcg > 1:540237/1‑100 (MQ=255) tACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGACATGCGTcg > 2:1914956/1‑100 (MQ=255) aCGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGACATGCGTcgc < 1:264340/100‑1 (MQ=255) aCGGTCATAGATCACGTCAAAATAAGAAGAGGGAAAACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGCAATGACATGCGTcgc < 2:3043908/100‑1 (MQ=255) tCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGATATGTACATTAGTACACAATTGCAGAGGGAGGAAACGACATGCGTCgcgc > 2:1635727/1‑98 (MQ=255) cATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTaa > 1:2459153/1‑100 (MQ=255) aTAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAAc < 2:1993201/100‑1 (MQ=255) aTAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAAc < 2:2556179/100‑1 (MQ=255) tAGACCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGACTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACg > 2:603374/1‑100 (MQ=255) aGATCACGTCAAAATAAGAAGTGGGAAGACAACATTAGCAAGGTTGTGTACATTGGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACGa > 2:3238574/1‑100 (MQ=255) aTCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACGATc > 1:799643/1‑100 (MQ=255) cGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACGATCCGCa > 2:75060/1‑100 (MQ=255) tCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACGATCCGCAAc > 1:2533744/1‑100 (MQ=255) aaaaTAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACGATCCGCAACgg > 1:629709/1‑100 (MQ=255) aaaTAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGAGCTAACGATCCGCAACGGc > 1:317411/1‑100 (MQ=255) naTAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATAGCAGTGAGAGGAAATGACATGCGTCGCGCTAACGATCCGCAAAGGCg > 2:1335529/2‑100 (MQ=255) aTAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACGATCCGCAACGGCga > 1:3702924/1‑100 (MQ=255) tAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACGATCCGCAACGGCgtg > 2:2309148/1‑98 (MQ=255) tAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACGATCCGCAACGGCgag < 2:66128/100‑1 (MQ=255) tAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACGATCCGCAACGGCg > 2:3601056/1‑98 (MQ=255) gaagaGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACGATCCGCAACGGCGAGaaa > 2:1093033/1‑100 (MQ=255) gaagaGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACGATCCGCAACGGCGAGaaa > 1:586317/1‑100 (MQ=255) gagGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACGATCCGCAACGGCGAGaaaaaa < 2:3448704/100‑1 (MQ=255) gggAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACGATCCGCAACGGCGAGAAAAAAtt > 2:920946/1‑100 (MQ=255) ggAAGACAACATTAGCAATGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACGATCCGCAACGGCGAGAAAAAATTa < 2:1390290/100‑1 (MQ=255) ggAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACGATCCGCAACGGCGAGAAAAAATTa < 1:1086360/100‑1 (MQ=255) gAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTCACGATCCGCAACGGCGAGAAAAAATTa > 2:13728/1‑99 (MQ=255) gACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTACCGATCCGCAACGGCGAGAAAAAATTATCCa > 1:769199/1‑100 (MQ=255) aacaTTAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACGATCCGCAACGGCGAGAAAAAATTATCCAGGc < 1:3072242/100‑1 (MQ=255) acaTTAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACGATCCGCAACGGCGAGAAAAAATTATCCAGGcc > 1:3780117/1‑100 (MQ=255) caTTAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACGATCCGCAACGGCGAGAAAAAATTATCCAGGCCa < 1:1346262/100‑1 (MQ=255) aTTAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACGATCCGCAACGGCGAGAAAAAATTATCCAGGCCAc > 1:2795964/1‑100 (MQ=255) aGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGATGAAATGACATGCGTCGCGCTAACGATCCGCAACGGCGAGAAAAAATTATCCAGGCCACGCt < 1:771790/100‑1 (MQ=255) aGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACGATCCGCAACGGCGAGAAAAAATTATCCAGGCCACGCt > 2:3667766/1‑100 (MQ=255) gCAAGGTTGTGTACATTTGTACCCAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACGATCCGCAACGGCGAGAAAAAATTATCCAGGCCACGCt > 2:2970154/1‑99 (MQ=255) gCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACGATCCGCAACGGCGAGAAAAAATTATCCAGGCCACGCTg > 1:283037/1‑100 (MQ=255) ctgcaattGTGTACAAATGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACGATCCGCAACGGAGAGAAAAAATTATCCAGGCCACGCTg > 2:3471684/7‑100 (MQ=38) tgcaattGTGTACAAATGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACGATCCGCAACGGCGAGAAAAAATTATCCAGGCCACGCTgg > 1:1902763/6‑100 (MQ=255) cAAGGTTGTGTACATTTGTACACACTTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACGAACCGCAACGGCGAGAAAAAATTATCCAGGCCACGCTgg > 2:1232769/1‑100 (MQ=255) caattGTGTACAAATGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACGATCCGCAACGGCGAGAAAAAATTATCCAGGCCACGCTGGAg > 2:1097898/4‑100 (MQ=255) caattGTGTACAAATGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACGATCCGCAACGGCGAGAAAAAATTATCCAGGCCACGCTGGAg > 1:3415441/4‑100 (MQ=255) caattGTGTACAAATGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACGATCCGCAACGGCGAGAAAAAATTATCCAGGCCACGCTGGAg > 1:397961/4‑100 (MQ=255) gTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACGATCCGCAACGGCGAGAAAAAATTATCCAGGCCACGCTGGAGGc > 2:1648944/1‑100 (MQ=255) gTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACGATCCGCAACGGCGAGAAAAAATTATCCAGGCCACGCTGGAGGc < 1:2309163/100‑1 (MQ=255) attGTGTACAAATGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACGATCCGCAACGGCGAGAAAAAATTATCCAGGCCACGCTGGAGGc > 1:2094228/2‑100 (MQ=255) attGTGTACAAATGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACGATCCGCAACGGCGAGAAAAAATTATCCAGGCCACGCTGGAGGc > 2:1960497/2‑100 (MQ=255) tgtgTACAAATGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACGATCCGCAACGGCGAGAAAAAATTATCCAGGCCACGCTGGAGGCgg > 1:3393772/1‑100 (MQ=255) gtgtACAAATGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACGATCCGCAACGGCGAGAAAAAATTATCCAGGCCACGCTGGAGGCGGt > 2:3728302/1‑100 (MQ=255) tgtACATTTGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACGATCCGCAACGGCGAGAAAAAATTATCCAGGCCACGCTGGAGGCGGTg > 1:1532414/1‑100 (MQ=255) tACATTTGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACGATCCGCAACGGCGAGAAAAAATTATCCAGGCCACGCTGGAGGCGGTGaa > 1:1395669/1‑100 (MQ=255) tACATTTGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACGATCCGCAACGGCGAGAAAAAATTATCCAGGCCACGCTGGAGGCGGTGaa < 1:1189855/100‑1 (MQ=255) aCATTTGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACGATCCGCAACGGCGAGAAAAAATTAGCCAGGCCACGCTGGAGGCGGTGaaa < 1:1111055/100‑1 (MQ=255) cATTTGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACGATCCGCAACGGCGAGAAAAAATTATCCAGGCCACGCTGGAGGCGGTGAAAc > 2:3746956/1‑100 (MQ=255) cATTTGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACGATCCGCAACGGCGAGAAAAAATTATCCAGGCCACGCTGGAGGCGGTGAAAc < 2:200402/100‑1 (MQ=255) cATTTGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACGATCCGCAACGGCGAGAAAAAATTATCCAGGCCACGCTGGAGGCGGTGAAAc < 2:682996/100‑1 (MQ=255) | GCCCAGGTTCGGCGTTTCAATGCATTACGTGAAGAATTTACGGTCATAGATCACGTCAAAATAAGAAGAGGGAAGACAACATTAGCAAGGTTGTGTACATTTGTACACAATTGCAGAGAGAGGAAATGACATGCGTCGCGCTAACGATCCGCAACGGCGAGAAAAAATTATCCAGGCCACGCTGGAGGCGGTGAAAC > NC_000913/887293‑887489 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |