Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 888,281 A→G 16.2% R513R (CGT→CGC)  ybjL ← putative transporter

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913888,2810AG16.2% 325.2 / 44.6 140R513R (CGT→CGC) ybjLputative transporter
Reads supporting (aligned to +/- strand):  ref base A (63/54);  new base G (12/11);  total (75/65)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 144 total aligned reads displayed.

CAGCAGGACGTTGGCGATTGCATAGGTGCCCGCATAGCCCAGCGCCGGGATGTTACTGCGAGCTGTATCACTGATGATCTCCATTGCCGGCGCGCAGGTACGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTCATTCGCAATACATAAGCACCGAACAAGAAACAGATAACCACGGGCACCAGACTGACAATC  >  NC_000913/888182‑888380
                                                                                                   |                                                                                                   
cagcagGACGTTGGCGATTGCATAGGTGCCCGCATAGCCCAGCGCCGGGATGTTACTGCGAGCTGTATCACTGATGATCTCCATTGCCGGCGCGCAGGTa                                                                                                     <  2:1894363/100‑1 (MQ=255)
 agcagGACGTTGGCGATTGCATAGGTGCCCGCATAGCCCAGCGCCGGGATGTTACTGCGAGCTGTATCACTGATGATCTCCATTGCCGGCGCGCAGGTAc                                                                                                    >  2:2579950/1‑100 (MQ=255)
 agcagGACGTTGGCGATTGCATAGGTGCCCGCATAGCCCAGCGCCGGGATGTTACTGCGAGCTGTATCACTGATGATCTCCATTGCCGGCGCGCAGGTAc                                                                                                    >  1:2741014/1‑100 (MQ=255)
       aCGTTGGCGATTGCATAGGTGCCCGCATAGCCCAGCGCCGGGATGTTACTGCGAGCTGTATCACTGATGATCTCCATTGCCGGCGCGCAGGTACGTgcgc                                                                                              <  1:2160550/100‑1 (MQ=255)
         gTTGGCGATTGCATAGGTGCCCGCATAGCCCAGCGCCGGGATGTTACTGCGAGCTGTATCACTGATGATCTCCATTGCCGGCGCGCAGGTACGTGCGccc                                                                                            >  1:1918587/1‑100 (MQ=255)
          ttGGCGATTGCATAGGTGCCCGCATAGCCCAGCGCCGGGATGTTACTGCGAGCTGTATCACTGATGATCTCCATTGCCGGCGCGCAGGTACGTGCGCCca                                                                                           >  2:2767007/1‑100 (MQ=255)
           tGGCGATTGCATAGGTGCCCGCATAGCCCAGCGCCGGGATGTTACTGCGAGCTGTATCACTGATGATCTCCATTGCCGGCGCGCAGGTACGTGCGCCcat                                                                                          >  1:2841743/1‑100 (MQ=255)
                  tGCATAGGTGCCCGCATAGCCCAGCGCCGGGATGTTACTGCGAGCTGTATCACTGATGATCTCCATTGCCGGCGCGCAGGTACGTGCGCCCATCATTgcg                                                                                   <  2:1355835/100‑1 (MQ=255)
                   gCATAGGTGCCCGCATAGCCCAGCGCCGGGATGTTACTGCGAGCTGTATCACTGATGATCTCCATTGCCGGCGCGCAGGTGCGTGCGCCCATCATTgcgc                                                                                  >  1:929232/1‑100 (MQ=255)
                   gCATAGGTGCCCGCATAGCCCAGCGCCGGGATGTTACTGCGAGCTGTATCACTGATGATCTCCATTGCCGGCGCGCAGGTACGTGCGCCCATCATTgcgc                                                                                  >  2:3517770/1‑100 (MQ=255)
                    cATAGGTGCCCGCATAGCCCAGCGCCGGGATGTTACTGCGAGCTGTATCACTGATGATCTCCATTGCCGGCGCGCAGGTGCGTGCGCCCATCATTGCGcc                                                                                 >  1:2501809/1‑100 (MQ=255)
                    cATAGGTGCCCGCATAGCCCAGCGCCGGGATGTTACTGCGAGCTGTATCACTGATGATCTCCATTGCCGGCGCGCAGGTACGTGCGCCCATCATTGCGcc                                                                                 >  1:1612895/1‑100 (MQ=255)
                        ggTGCCCGCATAGCCCAGCGCCGGGATGTTACTGCGAGCTGTATCACTGATGATCTCCATTGCCGGCGCGCAGGTACGTGCGCCCATCATTGCGCCGaac                                                                             <  2:2320073/100‑1 (MQ=255)
                        ggTGCCCGCATAGCCCAGCGCCGAGATATTACTGCGAGCTGTAGCACTCATTATCTCCACTGCCGGCGCGCAGGTACGTGCGCCCATCATTGCGCCGaa                                                                              <  2:2634194/99‑1 (MQ=255)
                         gTGCCCGCATAGCCCAGCGCCGGGATGTTACTGCGAGCTGTATCACTGATGATCTCCATTGGCGGCGCGCAGGTACGTGCGCCCATCATTGCGCCGa                                                                               >  2:823573/1‑97 (MQ=255)
                         gTGCCCGCATAGCCCAGCGCCGGGATGTTACTGCGAGCTGTATCACTGATGATCTCCATTGCCGGCGCGCAGGTACGTGCGCCCATCATTGCGCCGaaca                                                                            >  2:835848/1‑100 (MQ=255)
                           gCCCGCATAGCCCAGCGCCGGGATGTTACTGCGAGCTGTATCACTGATGATCTCCATTGCCGGCGCGCAGGTACGTGCGCCCATCATTGCGCCGaacaac                                                                          >  1:2501388/1‑100 (MQ=255)
                                 ntAGCCCAGCGCCGGGATGTTACTGCGAGCTGTATCACTGATGATCTCCATTGCCGGCGCGCAGGTACGTGCGCCCATCATTGCGCCGAACAACAgcgcg                                                                    >  1:2256884/2‑100 (MQ=255)
                                  tAGCCCAGCGCCGGGATGTTACTGCGAGCTGTATCACTGACGATCTCCATTGCCGGCGCGCAGGTGCGTGCGCCCATCATTGCGCCGAACAACAgcgcgc                                                                   <  2:1826701/100‑1 (MQ=255)
                                    gCCCAGCGCCGGGATGTTACTGCGAGCTGTATCACTGATGATCTCCATTGCCGGCGCGCAGGTACGTGCGCCCATCATTGCGCCGAACAACAGCGCGCgg                                                                 >  1:439161/1‑100 (MQ=255)
                                    gCCCAGCGCCGGGATGTTACTGCGAGCTGTATCACTGATGATCTCCATTGCCGGCGCGCAGGTACGTGCGCCCATCATTGCGCCGAACAACAGCGCGCgg                                                                 >  2:3811646/1‑100 (MQ=255)
                                    gCCCAGCGCCGGGATGTTACTGCGAGCTGTATCACTGATGATCTCCATTGCCGGCGCGCAGGTACGTGCGCCCATCATTGCCCCGAACAACAGCGCGCgg                                                                 >  1:1474967/1‑100 (MQ=255)
                                     cccAGCGCCGGGATGTTACTGCGAGCTGTATCACTGATGATCTCCATTGCCGGCGCGCAGGTACGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGt                                                                >  2:2494373/1‑100 (MQ=255)
                                     cccAGCGCCGGGATGTTACTGCGAGCTGTATCACTGATGATCTCCATTGCCGGCGCGCAGGTACGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGt                                                                >  1:3575281/1‑100 (MQ=255)
                                     cccAGCGCCGGGATGTTACTGCGAGCTGTATCACTGATGATCTCCATTGCCGGCGCGCAGGTACGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGt                                                                <  1:3077746/100‑1 (MQ=255)
                                      ccAGCGCCGGGATGTTACTGCGAGCTGTATCACTGATGATCTCCATTGCCGGCGCGCAGGTACGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGtt                                                               >  2:611461/1‑100 (MQ=255)
                                       cAGCGCCGGGATGTTACTGCGAGCTGTATCTCTGATGATCTCCATTGCCGGCGCGCAGGTACGTGTGCCCATCATTGCGCCGAACAACAGCGCGCGGtt                                                               <  2:219879/99‑1 (MQ=255)
                                        aGCGCCGGGATGTTACTGCGAGCTGTATCACTGATGATCTCCATTGCCGGCGCGCAGGTACGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTCa                                                             <  1:3641/100‑1 (MQ=255)
                                         gcgcCGGGATGTTACTGCGAGCTGTATCACTGATGATCTCCATTGCCGGCGCGCAGGTACGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTCAt                                                            >  1:1834985/1‑100 (MQ=255)
                                           gcCGGGATGTTACTGCGAGCTGTATCACTGATGATCTCCATTGCCGGCGCGCAGGTACGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGtt                                                               <  2:1560092/95‑1 (MQ=255)
                                           gcCGGGATGTTACTGCGAGCTGTATCACTGATGATCTCCATTGCCGGCGCGCAGGTACGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTCATTc                                                          <  1:799999/100‑1 (MQ=255)
                                             cGGGATGTTACTGCGAGCTGTATCACTGATGATCTCCATTGCCGGCGCGCAGGTACGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTCATTCGc                                                        >  1:1355853/1‑100 (MQ=255)
                                              gggATGTTACTGCGAGCTGTATCACTGATGATCTCCATTGCCGGCGCGCAGGTGCGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTCATTCGCa                                                       >  1:3112729/1‑100 (MQ=255)
                                              gggATGTTACTGCGAGCTGTATCACTGATGATCTCCATTGCCGGCGCGCAGGTACGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTCATTCGCa                                                       <  2:3065509/100‑1 (MQ=255)
                                              ggaaTGTTACTGCGAGCTGTATCACAGATGATCTCCATTGCCGGCGCGCAGGTGCATGCGCCCATCATTGCGCCAAACAACAACGCGCGGTTCATACGc                                                        <  2:3228814/96‑1 (MQ=255)
                                               ggATGTTACTGCGAGCTGTATCACTGATGATCTCCATTGCCGGCGCGCAGGTACGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTCATTCGCaa                                                      <  1:417470/100‑1 (MQ=255)
                                                gATGTTACTGCGAGCTGTATCACTGATGATCTCCATTGCCGGCGCGCAGGTACGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTCATTCGCAAt                                                     <  1:3216792/100‑1 (MQ=255)
                                                 aTGTTACTGCGAGCTGTATCACTGATGATCTCCATTGCCGGCGCGCAGGTACGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTCATTCGCAATa                                                    <  2:2053824/100‑1 (MQ=255)
                                                  tGTTACTGCGCGCTGTATCACTGATGATCTCCATTGCCGGCGCGCAGGTACGTGCGCCCATCATTGCGCGGAACAACAGCGCGCGGTTCATTCGCAATAc                                                   <  2:2504760/100‑1 (MQ=255)
                                                   gTTACTGCGAGCTGTATCACTGATGATCTCCATTGCCGGCGCGCAGGTACGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTCATTCGCAATACa                                                  >  1:2908827/1‑100 (MQ=255)
                                                   attACTGCGAGCTGTATCACTGATGCTCTCCATTTCCGGCGCGCAGGTGCTTGCGCCCATCATTGCGCCTCACAACAGCGCGCGGTTCAGTCGCAATCCa                                                  >  2:1149375/2‑100 (MQ=255)
                                                     tACTGCGAGCTGTATCACTGATGATCTCCATTGCCGGCGCGCAGGTACGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTCATTCGCAATACATa                                                <  1:3469594/100‑1 (MQ=255)
                                                       cTGCGAGCTGTATCACTGATGATCTCCATTGCCGGCGCGCAGGTGCGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTCATTCGCAATACATAAg                                              <  2:2535989/100‑1 (MQ=255)
                                                        tGCGAGCTGTATCACTGATGATCTCCATTGCCGGCGCGCAGGTACGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTCATTCGCAATACATAAGc                                             >  1:1186438/1‑100 (MQ=255)
                                                         gCGAGCTGTATCACTGATGATCTCCATTGCCGGCGCGCAGGTACGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTCATTCGCAATACATAAGCa                                            >  1:853595/1‑100 (MQ=255)
                                                           gAGCTGTATCACTGATGATCTCCATTGCCGGCGCGCAGGTACGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTCATTCGCAATACATAAGCAcc                                          <  2:1249009/100‑1 (MQ=255)
                                                            aGCTGTATCACTGATGATCTCCATTGCCGGCGCGCAGGTGCGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTCATTCGCAATACATAAGCACCg                                         >  1:1501864/1‑100 (MQ=255)
                                                             gCTGTATCACTGATGATCTCCATTGCCGGCGCGCAGGTGCGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTCATTCGCAATACATAAGCACCGa                                        >  1:550823/1‑100 (MQ=255)
                                                             gCTGTATCACTGATGATCTCCATTGCCGGCGCGCAGGTACGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTCATTCGCAATACATAAGCACCGa                                        <  1:2244365/100‑1 (MQ=255)
                                                               tGTATCACTGATGATCTCCATTGCCGGCGCGCAGGTACGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTCATTCGCAATACATAAGCACCGAAc                                      <  1:2429936/100‑1 (MQ=255)
                                                                gTATCACTGATGATCTCCATTGCCGGCGCGCAGGTACGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTCATTCGCAATACATAAGCACCGAACa                                     <  1:608077/100‑1 (MQ=255)
                                                                   tCACTGATGATCTCCATTGCCGGCGCGCAGGTACGTGCGCCCATCATTGCGCCGCACAACAGCGCGCGGTTCATTCGCAATACATAAGCACCGAACAAGa                                  >  2:1181319/1‑100 (MQ=255)
                                                                   tCACTGATGATCTCCATTGCCGGCGCGCAGGTACGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTCATTCGCAATACATAAGCACCGAACAAg                                   >  2:2789913/1‑99 (MQ=255)
                                                                    cACTGATGATCTCCATTGCCGGCGCGCAGGTGCGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTCATTCGCAATACATAAGCACCGAACAAGaa                                 >  1:805208/1‑100 (MQ=255)
                                                                    cACTGATGATCTCCATTGCCGGCGCGCAGGTACGTGCGCCCATCATTGCGCCGAACAGCAGCGCGCGGTGCATTCGCAATACATAAGCACCGAACAAGaa                                 >  2:2676994/1‑100 (MQ=255)
                                                                    cACTGATGATCTCCATTGCCGGCGCGCAGGTACGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTCATTCGCAATACATAAGCACCGAACAAGaa                                 >  2:430603/1‑100 (MQ=255)
                                                                    cACTGATGATCTCCATTGCCGGCGCGCAGGTACGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTCATTCGCAATACATAAGCACCGAACAAGaa                                 <  2:2945593/100‑1 (MQ=255)
                                                                     acggatgatCGCCATGGGCGGCGCGCAGGTACGTGCGCCCATCATTGCGCGGAACAACAGCGCGCGGTTCATTCGCAATACATAAGCACCGAAc                                      <  2:1164170/91‑1 (MQ=255)
                                                                      cTGATGATCTCCATTGCCGGCGCGCAGGTGCGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTCATTCGCAATACATAAGCACCGAACAAGAAAc                               >  2:1718067/1‑100 (MQ=255)
                                                                      cTGATGATCTCCATTGCCGGCGCGCAGGTGCGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTCATTCGCAATACATAAGCACCGAACAAGAAAc                               <  1:665649/100‑1 (MQ=255)
                                                                      cTGATGATCTCCATTGCCGGCGCGCAGGTACGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTCATTCGCAATACATAAGCACCGAACAAGAAAc                               >  1:1218376/1‑100 (MQ=255)
                                                                      cTGATGATCTCCATTGCCGGCGCGCAGGTACGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTCATTCGCAATACATAAGCACCGAACAAGAAAc                               <  1:2706203/100‑1 (MQ=255)
                                                                      cTGATGATCTCCATTGCCGGCGCGCAGGTACGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTCATTCGCAATACATAAGCACCGAACAAGAAAc                               <  1:2141819/100‑1 (MQ=255)
                                                                        gatgatCTCCATTGCCGGCGCGCAGGTACGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTCATTCGCAATACATAAGCACCGAACAAGAAACAg                             >  2:2182521/1‑100 (MQ=255)
                                                                        gatgatCTCCATTGCCGGCGCGCAGGTACGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTCATTCGCAATACATAAGCACCGAACAAGAAACAg                             <  1:2702809/100‑1 (MQ=255)
                                                                         atgatCTCCATTGCCGGCGCGCAGGTACGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTCATTCGCAATACATAAGCACCGAACAAGAAACAGa                            <  1:1091582/100‑1 (MQ=255)
                                                                          tgatCTCCATTGCCGGCGCGCAGGTACGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTCATTCGCAATACATAAGCACCGAACAAGAAACAGAt                           <  2:3007619/100‑1 (MQ=255)
                                                                           gatCTCCATTGCCGGCGCGCAGGTACGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTCATTCGCAATACATAAGCACCGAACAAGAAACAGATa                          >  1:1936260/1‑100 (MQ=255)
                                                                           gatCTCCATTGCCGGCGCGCAGGTACGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTCATTCGCAATACATAAGCACCGAACAAGAAACAGATa                          >  2:1506253/1‑100 (MQ=255)
                                                                             tgtcCATTGCCGGCGCGCAGGTACGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTCATTCGCAATACATAAGCACCGAACAAGAAACAGATAAc                        >  1:2588833/3‑100 (MQ=255)
                                                                              ctcCATTGCCGGCGCGCAGGTACGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTCATTCGCAATACATAAGCACCGAACAAGAAACAGATAAcc                       >  1:2937530/1‑100 (MQ=255)
                                                                              ctcCATTGCCGGCGCGCAGGTACGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTCATTCGCAATACATAAGCACCGAACAAGAAACAGATAAcc                       >  2:1787120/1‑100 (MQ=255)
                                                                              ctcCATTGCCGGCGCGCAGGTACGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTCATTCGCAATACATAAGCACCGAACAAGAAACAGATAAc                        >  2:240008/1‑99 (MQ=255)
                                                                               tcCATTGCCGGCGCGCAGGTGCGTGCGCCTATCATTGCGCCGAACAACAGCGCGCGGTTCATTCGCAATACATAAGCACCGAACAAGAAACAGATAACCa                      <  2:2300200/100‑1 (MQ=255)
                                                                               tcCATTGCCGGCGCGCAGGTACGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTCATTCGCAATACATAAGCACCGAACAAGAAACAGATAACCa                      >  1:3518377/1‑100 (MQ=255)
                                                                                ccATTGCCGGCGCGCAGGTACGTGCGCCCATCATTGCGCCGAACAAGAGCGCGCGGTTCATTCGCAATACATAAGCACCGAACAAGAAACAGATAACCAc                     >  2:2109464/1‑100 (MQ=255)
                                                                                ccATTGCCGGCGCGCAGGTACGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTCATTCGCAATACATAAGCACCGAACAAGAAACAGATAACCAc                     >  1:3595237/1‑100 (MQ=255)
                                                                                ccATTGCCGGCGCGCAGGTACGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTCATTCGCAATACATAAGCACCGAACAAGAAACAGATAACCAc                     >  2:324290/1‑100 (MQ=255)
                                                                                 cATTGCCGGCGCGCAGGTACGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTCATTCGCAATACATAAGCACCGAACAAGAAACAGATAACCACg                    >  1:3193893/1‑100 (MQ=255)
                                                                                  aTTGCCGGCGCGCAGGTACGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTCATTCGCAATACATAAGCACCGAACAAGAAACAGATAACCACgg                   >  2:3422393/1‑100 (MQ=255)
                                                                                  aTTGCCGGCGCGCAGGTACGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTCATTCGCAATACATAAGCACCGAACAAGAAACAGATAACCACgg                   <  2:3387932/100‑1 (MQ=255)
                                                                                    tGCCGGCGCGCAGGTACGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTCCTTCGCAATACATAAGAACCGAACAAGAAACAGATAACCACgg                   >  2:2847515/1‑98 (MQ=255)
                                                                                    tGCCGGCGCGCAGGTACGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTCATTCGCAATACATAAGCACCGAACAAGAAACAGATAACCACGGGc                 <  1:551472/100‑1 (MQ=255)
                                                                                    tGCCGGCGCGCAGGTACGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTCATTCGCAATACATAAGCACCGAACAAGAAACAGATAACCACGGGc                 <  2:124422/100‑1 (MQ=255)
                                                                                     gCCGGCGCGCAGGTACGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTCATTCGCAATACATAAGCACCGAACAAGAAACAGATAACCACGGGCa                >  1:1690405/1‑100 (MQ=255)
                                                                                       cGGCGCGCAGGTGCGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTCATTCGCAATACATAAGCACCGAACAAGAAACAGATAACCACGGGCAcc              <  1:3480569/100‑1 (MQ=255)
                                                                                       cGGCGCGCAGGTACGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTCATTCGCAATACATAAGCACCGAACAAGAAACAGATAACCACGGGCAcc              <  2:621777/100‑1 (MQ=255)
                                                                                         gcgcgcAGGTGCGTGCGCCGGTCATTGCGCCGAACAAGAGCGCGGGGGTCATTCGCAATACATAGGCACCGAACAAGAAACAGATGACCACgg                   <  2:3387952/93‑1 (MQ=255)
                                                                                          cgcgcAGGTGCGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTCATTCGCAATACATAAGCACCGAACAAGAAACAGATAACCACGGGCACCAGa           <  2:3754501/100‑1 (MQ=255)
                                                                                          cgcgcAGGTACGTGCGCCCATCGTTGCGCCGAACAACAGCGCGCGGTTCATTCGCAATACATAAGCACCGAACAAGAAACAGATAACCACGGGCACCAGa           >  2:2217872/1‑100 (MQ=255)
                                                                                          cgcgcAGGTACGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTCATTCGCAATACATAAGCACCGAACAAGAAACAGATAACCACGGGCACCAg            >  1:447293/1‑99 (MQ=255)
                                                                                           gcgcAGGTGCGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTCATTCGCAATACATAAGCACCGAACAAGAAACAGATAACCACGGGCACCAGAc          <  1:2547675/100‑1 (MQ=255)
                                                                                           gcgcAGGTACGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTCATTCGCAATACATAAGCACCGAACAAGAAACAGATAACCACGGGCACCAGAc          <  1:3579436/100‑1 (MQ=255)
                                                                                            cgcAGGTACGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTCATTCGCAATACATAAGCACCGAACAAGAAACAGATAACCACGGGCACCAGACt         <  1:2750975/100‑1 (MQ=255)
                                                                                             gcAGGTGCGTGCGCCCCTCATTGCGCCGAACAACAGCGCGCGGTTCATTCGCAATACATAAGCACCGAACAAGAAACAGATAACCACGGGCACCAGACTg        <  2:2226756/100‑1 (MQ=255)
                                                                                               aGGTACGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTCATTCGCAATACATAAGCACCGAACAAGAAACAGATAACCACGGGCACCAGACTGAc      <  1:1793404/100‑1 (MQ=255)
                                                                                                ggTACGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTCATTCGCAATACATAAGCACCGAACAAGAAACAGATAACCACGGGCACCAGACTGAca     <  2:509424/100‑1 (MQ=255)
                                                                                                ggTACGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTCATTCGCAATACATAAGCACCGAACAAGAAACAGATAACCACGGGCACCAGACTGAca     >  2:2651352/1‑100 (MQ=255)
                                                                                                   aCGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTCATTCGCAATACATAAGCACCGAACAAGAAACAGATAACCACGGGCACCAGACTGAcaatc  <  2:3089876/100‑1 (MQ=255)
                                                                                                   aCGAGCGCCCATCACTGCGCCGAACAACAGCGCGCGGCTAATTCGCAAGACATCGGCCCCGAACCAGAAACAGATAACCTCGGGCATCAGAATGGctatc  <  2:3709057/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
CAGCAGGACGTTGGCGATTGCATAGGTGCCCGCATAGCCCAGCGCCGGGATGTTACTGCGAGCTGTATCACTGATGATCTCCATTGCCGGCGCGCAGGTACGTGCGCCCATCATTGCGCCGAACAACAGCGCGCGGTTCATTCGCAATACATAAGCACCGAACAAGAAACAGATAACCACGGGCACCAGACTGACAATC  >  NC_000913/888182‑888380

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑