Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 1,146,997 G→A 100% T68T (ACG→ACA yceD → DUF177 family protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,146,9970GA97.5% 473.3 / ‑0.2 146T68T (ACG→ACAyceDDUF177 family protein
Reads supporting (aligned to +/- strand):  ref base G (1/3);  new base A (78/63);  total (79/67)
Fisher's exact test for biased strand distribution p-value = 3.30e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 146 total aligned reads displayed.

AATCCGTAGTCAGTGTGGACAGTGATGTGGAATGCTCCATGTCGTTCGCTATCGATAACCAACGTCTCGCAGTGTTAAACGGCGATGCGAAGGTGACGGTAACGCTCGAGTGTCAGCGTTGCGGGAAGCCGTTTACTCATCAGGTCTACACAACGTATTGTTTTAGTCCTGTGCGTTCAGACGAACAGGCTGA  >  NC_000913/1146900‑1147092
                                                                                                 |                                                                                               
aaTCCGTGGTCAGTGTGGACAGTGATGTGGAATGCTCCATGTCGTTCGCTATCGATAACCAACGTCTCGCAGTGTTAAACGGCGATGCGAAGGTGACAGt                                                                                               <  2:2923292/100‑1 (MQ=255)
    cGTAGTCAGTGTGGGCAGTGATGTGGAATGCTCCATGTCGTTCGCTATCGATAACCAACGTCTCGCAGTGTTAAACGGCGATGCGAAGGTGACAGTAACg                                                                                           >  2:385546/1‑100 (MQ=255)
    cGTAGTCAGTGTGGACAGTGATGTGGAATGCTCCATGTCGTTCGCTATCGATAACCAACGTCTCGCAGTGTTAAACGGCGATGCGAAGGTGACAGTAACg                                                                                           <  2:268992/100‑1 (MQ=255)
    cGTAGTCAGTGTGGACAGTGATGTGGAATGCTCCATGTCGTTCGCTATCGATAACCAACGTCTCGCAGTGTTAAACGGCGATGCGAAGGTGACAGTAACg                                                                                           >  2:2714329/1‑100 (MQ=255)
    cGTAGTCAGTGTGGACAGTGATGTGGAATGCTCCATATCGTTCGCTATCGATAACCAACGTCTCGCAGTGTTAAACGGCGATGCGAAGGTGACAGTAACg                                                                                           >  2:3643641/1‑100 (MQ=255)
       aGTCAGTGTGGACAGTGATGTGGAATGCTCCATGTCGTTCGCTATCGATAACCAACGTCTCGCAGTGTTAAACGGCGATGCGAAGGTGACAGTAACGCTc                                                                                        >  2:1050504/1‑100 (MQ=255)
       aGTCAGTGTGGACAGTGATGTGGAATGCTCCATGTCGTTCGCTATCGATAACCAACGTCTCGCAGTGTTAAACGGCGATGCGAAGGTGACAGTAACGCTc                                                                                        >  2:1453993/1‑100 (MQ=255)
        gTCAGTGTGGACAGTGATGTGGAATGCTCTATGTCGTTCGCTATCGATAACCAACGTCTCGCAGTGCTAAACGGCGATGCGAAGGTGACAGTAACGCTCg                                                                                       <  2:2298370/100‑1 (MQ=255)
         tCAGTGTGGACAGTGATGTGGAATGCTCCATGTCGTTCGCTATCGATAACCAACGTCTCGCAGTGTTAAACGGCGATGCGAAGGTGACAGTAACGCTCGa                                                                                      >  2:1703813/1‑100 (MQ=255)
          cAGTGTGGACCGTGATGTGGAATCCTCCATGTCGTTCGCCATCGATAACCAACGTCTCGCCGAGCTAAACGCCGATGCGAAGCTGACAGTAACGc                                                                                          >  2:2464560/1‑95 (MQ=255)
          cAGTGTGGACAGTGATGTGGAATGCTCCATGTCGTTCGCTATCGATAACCAACGTCTCGCAGTGTTAAACGGCGATGCGAAGGTGACAGTAACGCTCGAg                                                                                     <  2:863651/100‑1 (MQ=255)
          cAGTGTGGACAGTGATGTGGAATGCTCCATGTCGTTCGCTATCGATAACCAACGTCTCGCAGTGTTAAACGGCGATGCGAAGGTGACAGTAACGCTCGAg                                                                                     <  1:3740685/100‑1 (MQ=255)
          cAGTGTGGACAGTGATGTGGAATGCTCCATGTCGTTCGCTATCGATAACCAACGTCTCGCAGTGTTAAACGGCGATGCGAAGGTGACAGTAACGCTCGAg                                                                                     <  2:396745/100‑1 (MQ=255)
          cAGTGTGGACAGTGATGTGGAATGCTCCATGTCGTTCGCTATCGATAACCAACGTCTCGCACTGTTAAACGGCGATGCGAAGGTGACAGTAACGCTCGAg                                                                                     >  1:1607512/1‑100 (MQ=255)
           aGTGTGGACAGTGATGTGGAATGCTCCATGTCGTTCGCTATCGATAACCAACGTCTCGCAGTGTTAAACGGCGATGCGAAGGAGACAGTAACGTTCGAgt                                                                                    >  1:1765905/1‑100 (MQ=255)
            gtgtGGACAGTGATGTGGAATGCTCCATGTCGTTCGCTATCGATAACCAACGTCTCGCAGTGTTAAACGGCGATGCGAAGGTGACAGTAACGCTCGAgtg                                                                                   <  2:3653347/100‑1 (MQ=255)
            gtgtGGACAGTGATGTGGAATGCTCCATGTCGTTCGCTATCGATAACCAACGTCTCGCAGTGTTAAACGGCGATGCGAAGGTGACAGTAACGCTCGAgtg                                                                                   <  2:2235780/100‑1 (MQ=255)
              cgctcttccgATCTGGAATGCTCCATGTCGTTCGCTATCGATAACCAACGTCTCGCAGTGTTAAACGGCGATGCGAAGGTGACAGTAACGCTCGAGTGTc                                                                                 <  2:2409295/91‑1 (MQ=255)
                ggACAGTGATGTGGAATGCTCCATGTCGTTCGCTATCGATAACCAACGTCTCGCAGTGTTAAACGGCGATGCGAAGGTGACAGTAACGCTCGAgtgt                                                                                  >  2:2178930/1‑97 (MQ=255)
                ggACAGTGATGTGGAATGCTCCATGTCGTTCGCTATCGATAACCAACGTCTCGCAGTGTTAAACGGCGATGCGAAGGTGACAGTAACGCTCGAGTGTCAg                                                                               <  1:327204/100‑1 (MQ=255)
                  aCAGTGATGTGGAATGCTCCATGTCGTTCGCTATCGATAACCAACGTCTCGCAGTGTTAAACGGCGATGCGAAGGTGACAGTAACGCTCGAGTGTCAGCg                                                                             >  1:3213487/1‑100 (MQ=255)
                     gTGATGTGGAATGCTCCATGTCGTTCGCTATCGATAACCAACGTCTCGCAGTGTTAAACGGCGAGGCGAAGGTGACAGTAACGCTCGAGGGTCAGCGTTg                                                                          >  2:64343/1‑100 (MQ=255)
                       gATGTGGAATGCTCCATGTCGTTCGCTATCGATAACCAACGTCTCGCAGTGTTAAACGGCGATGCGAAGGTGACAGTAACGCTCGAGTGTCAGCGTTGCg                                                                        <  2:471303/100‑1 (MQ=255)
                       gATGTGGAATGCTCCATGTCGTTCGCTATCGATAACCAACGTCTCGCAGTGTTAAACGGCGATGCGAAGGTGACAGTAACGCTCGAGTGTCAGCGTTGCg                                                                        <  2:1256690/100‑1 (MQ=255)
                       gATGTGGAATGCTCCATGTCGTTCGCTATCGATAACCAACGTCTCGCAGTGTTAAACGGCGATGCGAAGGTGACAGTAACGCTCGAGTGTCAGCGTTGCg                                                                        >  1:1564861/1‑100 (MQ=255)
                        aTGTGGAATGCTCCATGTCGTTCGCTATCGATAACCAACGTCTCGCAGTGTTAAACGGCGATGCGAAGGTGACGGTAACGCTCGAGTGTCAGCGTTGCgg                                                                       <  1:2504095/100‑1 (MQ=255)
                        aTGTGGAATGCTCCATGTCGTTCGCTATCGATAACCAACGTCTCGCAGTGTTAAACGGCGATGCGAAGGTGACAGTAACGCTCGAGTGTCAGCGTTGCg                                                                        <  2:780916/99‑1 (MQ=255)
                          gtgGAATGCTCCATGTCGTTCGCTATCGATAACCAACGTCTCGCAGTGTTAAACGGCGATGCGAAGGTGACAGTAACGCTCGAGTGTCAGCGTTGCGGGa                                                                     >  1:1596218/1‑100 (MQ=255)
                           tgGAATGCTCCATGTCGTTCGCTATCGATAACCAACGTCTCGCAGTGTTAAACGGCGATGCGAAGGTGACAGTAACGCTCGAGTGTCAGCGTTGCGGGaa                                                                    >  1:786715/1‑100 (MQ=255)
                             gAATGCTCCATGTCGTTCGCTATCGATAACCAACGTCTCGCAGTGTTAAACGGCGATGCGAAGGTGACGGTAACGCTCGAGTGTCAGCGTTGCGGGAAGc                                                                  <  1:1985047/100‑1 (MQ=255)
                             gAATGCTCCATGTCGTTCGCTATCGATAACCAACGTCTCGCAGTGTTAAACGGCGATGCGAAGGTGACAGTAACGCTCGAGTGTCAGCGTTGCGGGAAGc                                                                  >  2:2559853/1‑100 (MQ=255)
                              aaTGCTCCATGTTGTTCGCTATCGCTAACCAACGTCTCGCAGTGTTAAACGGCGATGCGAAGGTGACAGTAACGCTCGAGTGTCAGCGTTGCGGGAAGcc                                                                 <  2:747603/100‑1 (MQ=255)
                               aTGCTCCATGTCGTTCGCTATCGATAACCAACGTCTCGCAGTGTTAAACGGCGATGCGAAGGTGACAGTAACGCTCGAGTGTCAGCGTTGCGGGAAGCCg                                                                <  1:3445849/100‑1 (MQ=255)
                               aTGCTCCATGTCGTTCGCTATCGATAACCAACGTCTCGCAGTGTTAAACGGCGATGCGAAGGTGACAGTAACGCTCGAGTGTCAGCGTTGCGGGAAGCCg                                                                <  2:3415026/100‑1 (MQ=255)
                                tGCTCCATGTCGTTCGCTATCGATAACCAACGTCTCGCAGTGTTAAACGGCGCTGCGAAGGTGACAGTAACGCTCGAGTGTCAGCGTTGCGGGAAGCCg                                                                >  2:3202692/1‑99 (MQ=255)
                                tGCTCCATGTCCTTCGCTATCGATAACCAACGTCTCGCAGTGTTAAACGGCGATGCGAAGGTGACAGTAACGCTCGAGTGTCAGCGTTGCGGGAAGCCg                                                                <  2:1369661/99‑1 (MQ=255)
                                 gCTCCATGTCGTTCGCTATCGATAACCAACGTCTCGCAGTGTTAAACGGCGATGCGAAGGTGACAGTAACGCTCGAGTGTCAGCGTTGCGGGAAGCCGtt                                                              <  2:524755/100‑1 (MQ=255)
                                  cTCCATGTCGTTCGCTATCGATAACCAACGTCTCGCAGTGTTAAACGGCGATGCGAAGGTGACAGTAACGCTCGAGTGTCAGCGTTGCGGGAAGCCGttt                                                             >  1:959314/1‑100 (MQ=255)
                                    ccATGTCGTTCGCTATCGATAACCAACGTCTCGCAGTGTTAAACGGCGATGCGAAGGTGACAGTAACGCTCGAGTGTCAGCGTTGCGGGAAGCCGttt                                                             <  1:1304510/98‑1 (MQ=255)
                                      aTGTCGTTCGCTATCGATAACCAACGTCTCGCAGTGTTAAACGGCGATGCGAAGGTGACAGTAACGCTCGAGTGTCAGCGTTGCGGGAAGCCGTTTACtc                                                         <  2:955771/100‑1 (MQ=255)
                                       tGTCGTTCGCTATCGATAACCAACGTCTCGCAGTGTTAAACGGCGATGCGAAGGTGACAGTAACGCTCGAGTGTCAGCGTTGCGGGAAGCCGTTTACtca                                                        >  1:1847099/1‑100 (MQ=255)
                                       tGTCGTTCGCTATCGATAACCAACGTCTCGCAGTGTTAAACGGCGATGCGAAGGTGACAGTAACGCTCGAGTGTCAGCGTTGCGGGAAGCCGTTTACtca                                                        >  1:3434426/1‑100 (MQ=255)
                                         tCGTTCGCTATCGATAACCAACGTCTCGCAGTGTTAAACGGCGATGCGAAGGTGACAGTAACGCTCGAGTGTCAGCGTTGCGGGAAGCCGTTTACtcatc                                                      <  1:3377823/100‑1 (MQ=255)
                                          cGTTCGCTATCGATAACCAACGTCTCGCAGTGTTAAACGGCGATGCGAAGGTGACAGTAACGCTCGAGTGTCAGCGTTGCGGGAAGCCGTTTACtcatca                                                     >  2:648590/1‑100 (MQ=255)
                                           gTTCGCTATCGATAACCAACGTCTCGCAGTGTTAAACGGCGAAGCGAAGGTGACAGTAACGCTCGAGTGTCAGCGTTGCGGGAAGCCGTTTACTCATCAg                                                    >  1:505479/1‑100 (MQ=255)
                                             tCGCTATCGATAACCAACGTCTCGCAGTGTTAAACGGCGATGCGAAGGTGACAGTAACGCTCGAGTGTCAGCGTTGCGGGAAGCCGTTTACTCATCAGGt                                                  >  1:811440/1‑100 (MQ=255)
                                              cGCTATCGATAACCAACGTCTCGCAGTGTTAAACGGCGATGCGAAGGTGACAGTAACGCTCGAGTGTCAGCGTTGCGGGAAGCCGTTTACTCATCAGGTc                                                 <  1:770411/100‑1 (MQ=255)
                                              cGCTATCGATAACCAACGTCTCGCAGTGTTAAACGGCGATGCGAAGGTGACAGTAACGCTCGAGTGTCAGCGTTGCGGGAAGCCGTTTACTCATCAGGTc                                                 >  1:895470/1‑100 (MQ=255)
                                              cGCTATCGATAACCAACGTCTCGCAGTGTTAAACGGCGATGCGAAGGTGACAGTAACGCTCGAGTGTCAGCGTTGCGGGAAGCCGTTTACTCATCAGGTc                                                 <  1:3461156/100‑1 (MQ=255)
                                               gCTATCGATAACCAACGTCTCGCAGTGTTAAACGGCGATGCGAAGGTGACAGTAACGCTCGAGTGTCAGCGTTGCGGGAAGCCGTTTACTCATCAGGTCt                                                <  1:1009197/100‑1 (MQ=255)
                                                cTATCGATAACCAACGTCTCGCAGTGTTAAACGGCGATGCGAAGGTGACAGTAACGCTCGAGTGTCAGCGTTGCGGGAAGCCGTTTACTCATCAGGTCTa                                               <  1:964976/100‑1 (MQ=255)
                                                 tATCGATAACCAACGTCTCGCAGTGTTAAACGGCGATGCGAAGGTGACAGTAACGCTCGAGTGTCAGCGTTGCGGGAAGCCGTTTACTCATCAGGTCTac                                              <  1:2846550/100‑1 (MQ=255)
                                                  aTCGATAACCAACGTCTCGCAGTGTTAAACGGCGATGCGAAGGTGACAGTAACGCTCGAGTGTCAGCGTTGCGGGAAGCCGTTTACTCATCAGGTCTaca                                             >  1:2629107/1‑100 (MQ=255)
                                                   tCGATAACCAACGTCTCGCAGTGTTAAACGGCGATGCGAAGGTGACAGTAACGCTCGAGTGTCAGCGTTGCGGGAAGCCGTTTACTCATCAGGTCTacac                                            >  2:3714884/1‑100 (MQ=255)
                                                   tCGATAACCAACGTCTCGCAGTGTTAAACGGCGATGCGAAGGTGACAGTAACGCTCGAGTGTCAGCGTTGCGGGAAGCCGTTTACTCATCAGGTCTacac                                            >  2:3481607/1‑100 (MQ=255)
                                                     gATAACCAACGTCTCGCAGTGTTAAACGGCGATGCGAAGGTGACAGTAACGCTCGAGTGTCAGCGTTGCGGGAAGCCGTTTACTCATCAGGTCTACACaa                                          >  1:517317/1‑100 (MQ=255)
                                                       tAACCAACGTCTCGCAGTGTTAAACGGCGATGCGAAGGTGACAGTAACGCTCGAGTGTCAGCGTTGCGGGAAGCCGTTTACTCATCAGGTCTACACAACg                                        <  2:1564851/100‑1 (MQ=255)
                                                       tAACCAACGTCTCGCAGTGTTAAACGGCGATGCGAAGGTGACAGTAACGCTCGAGTGTCAGCGTTGCGGGAAGCCGTTTACTCATCAGGTCTACACAACg                                        >  1:2796968/1‑100 (MQ=255)
                                                         aCCAACGTCTCGCAGTGTTAAACGGCGATGCGAAGGTGACAGTAACGCTCGAGTGTCAGCGTTGCGGGAAGCCGTTTACTCATCAGGTCTACACAACGTa                                      >  1:1002207/1‑100 (MQ=255)
                                                         aCCAACGTCTCGCAGTGTTAAACGGCGATGCGAAGGTGACAGTAACGCTCGAGTGTCAGCGTTGCGGGAAGCCGCTTACTCATCAGGTCTACACAACGTa                                      >  1:191178/1‑100 (MQ=255)
                                                          ccAACGTCTCGCAGTGTTAAACGGCGATGCGAAGGTGACAGTAACGCTCGAGTGTCAGCGTTGCGGGAAGCCGTTTACTCATCAGGTCTACACAACGTAt                                     >  2:955290/1‑100 (MQ=255)
                                                          ccAACGTCTCGCAGTGTTAAACGGCGATGCGAAGGTGACAGTAACGCTCGAGTGTCAGCGTTGCGGGAAGCCGTTTACTCATCAGGTCTACACAACGTAt                                     >  1:3125075/1‑100 (MQ=255)
                                                          ccAACGTCTCGCAGTGTTAAACGGCGATGCGAAGGTGACAGTAACGCTCAAGTGCCCGCGTTGCGGGAAGCCGTTTAATCATCAGGTCTACACAACGTAt                                     >  1:2067416/1‑100 (MQ=255)
                                                             aCGTCTCGCAGTGTTAAACGGCGATGCGAAGGTGACAGTAACGCTCGAGTGTCAGCGTTGCGGGAAGCCGTTTACTCATCAGGTCTACACAACGTATTGt                                  <  1:2234077/100‑1 (MQ=255)
                                                               gTCTCGCAGTGTTAAACGGCGATGCGAAGGTGACAGTAACGCTCGAGTGTCAGCGTTGCGGGAAGCCGTTTACTCATCAGGTCTACACAACGTATTGttt                                >  1:1110017/1‑100 (MQ=255)
                                                                tctcGCAGTGTTAAACGGCGATGCGAAGGTGACAGTAACGCTCGAGTGTCAGCGTTGCGGGAAGCCGTTTACTCATCAGGTCTACACAACGTATTGtttt                               <  2:1613872/100‑1 (MQ=255)
                                                                tctcGCAGTGTTAAACGGCGATGCGAAGGTGACAGTAACGCTCGAGTGTCAGCGTTGCGGGAAGCCGTTTACTCATCAGGTCTACACAACGTATTGtttt                               <  2:3553488/100‑1 (MQ=255)
                                                                tctcGCAGTGTTAAACGGCGATGCGAAGGTGACAGTAACGCTCGAGTGTCAGCGTTGCGGGAAGCCGTTTACTCATCAGGTCTACACAACGTATTGtttt                               >  1:2677305/1‑100 (MQ=255)
                                                                tctcGCAGTGTTAAAAGGCCATGCGAAGTTAACAGTAACGCTCGAGTGTCAGCGTTGCTGGAATCCGTTTACTCATCAGTTCTACACAACGTATTGttt                                <  2:2881850/99‑1 (MQ=255)
                                                                  tcGCAGTGTTAAACGGCGATGCGAAGGTGACAGTAACGCTCGAGTGTCAGCGTTGCGGGAAGCCGTTTACTCATCAGGTCTACACAACTTATCGTTTTAg                             <  2:1998180/100‑1 (MQ=255)
                                                                  tcGCAGTGTTAAACGGCGATGCGAAGGTGACAGTAACGCTCGAGTGTCAGCGTTGCGGGAAGCCGTTTACTCATCAGGTCTACACAACGTATTGTTTTAg                             <  1:3074908/100‑1 (MQ=255)
                                                                  tcGCAGTGTTAAACGGCGATGCGAAGGTGACAGTAACGCTCGAGTGTCAGCGTTGCGGGAAGCCGTTTACTCATCAGGTCTACACAACGTATTGTTTTAg                             <  1:2395475/100‑1 (MQ=255)
                                                                   cGCAGTGTTAAACGGCGATGCGAAGGTGACAGTAACGCTCGAGTGTCAGCGTTGCGGGAAGCCGTTTACTCATCAGGTCTACACAACGTATTGtttttg                             <  1:3535577/99‑3 (MQ=255)
                                                                   cGCAGTGTTAAACGGCGATGCGAAGGTGACAGTAACGCTCGAGTGTCAGCGTTGCGGGAAGCCGTTTACTCATCAGGTCTACACAACGTATTGTTTTAGt                            <  1:2884712/100‑1 (MQ=255)
                                                                        tgtTAAACGGCGATGCGAAGGTGACAGTAACGCTCGAGTGTCAGCGTTGCGGGAAGCCGTTTACTCATCAGGTCTACACAACGTATTGTTTTAGTCCtgt                       >  1:2531776/1‑100 (MQ=255)
                                                                         gtTAAACGGCGATGCGAAGGTGACCGTAACGCTCTAGTGTCAGCGTTGCGGGAAGCCGTTTACTCATCAGATCTACACAACGTATTGTTTTAGTCCtgtg                      <  2:826094/100‑1 (MQ=255)
                                                                         gtTAAACGGCGATGCGAAGGTGACAGTAACGCTCGAGTGTCAGCGTTGCGGGAAGCCGTTTACTCATCAGGTCTACACAACGTATTGTTTTAGTCCtgtg                      >  2:3201623/1‑100 (MQ=255)
                                                                          ttAAACGGCGATGCGAAGGTGACAGTAACGCTCGAGTGTCTGCTTTGCGTGAATTCGTTTACTCATCAGGTCTACACAACGTATTGTTTTAGTCCTGTGc                     <  2:2520101/100‑1 (MQ=255)
                                                                          ttAAACGGCGATGCGAAGGTGACAGTAACGCTCGAGTGTCAGCGTTGCGGGAAGCCGTTTACTCATCAGGTCTACACAACGTATTGTTTTAGTCCTGTGc                     >  2:2862323/1‑100 (MQ=255)
                                                                           tAAACGGCGATGCGGAAGTGACAGTAACGATCGAGTGTCAGCTTTGCGGGAAGCCGATTATACATCAGGTCGACAAAACGGATTGTTTTAGACCTGTGc                     >  2:366763/1‑99 (MQ=255)
                                                                            aaaCGGCGATGCGAAGGTGACAGTAACGCTCGAGTGTCAGCGTTGCGGGAAGCCGTTTACTCATCAGGTCTACACAACGTATTGTTTTAGTCCTGTGCGt                   <  1:1908880/100‑1 (MQ=255)
                                                                             aaCGGCGATGCGAAGGTGACAGTAACGCTCGAGTGTCAGCGTTGCGGGAAGCCGTTTACTCATCAGGTCTACACAACGTATTGTTTTAGTCCTGTGCGtt                  >  1:566931/1‑100 (MQ=255)
                                                                              aCGGCGATGCGAAGGTGACAGTAACGCTCGAGTGTCAGCGTTGCGGGAAGCCGTTTACTCATCAGGTCTACACAACGTATTGTTTTAGTCCTGTGCGTTc                 >  2:3393726/1‑100 (MQ=255)
                                                                               cGGCGATGCGAAGGTGACAGTAACGCTCGCGTGTCAGCGTTGCGGGAAGCCGTTTACTCATCAGGTCTACACAACGTATTGTTTTAGTCCTGTGCGTTCa                >  2:1786785/1‑100 (MQ=255)
                                                                               cGGCGATGCGAAGGTGACAGTAACGCTCGAGTGTCAGCGTTGCGGGAAGCCGTTTACTCATCAGGTCTACACAACGTATTGTTTTAGTCCTGTGCGTTc                 <  2:178835/99‑1 (MQ=255)
                                                                               cGGCGATGCGAAGGTGACAGTAACGCTCGAGTGTCAGCGTTGCGGGAAGCCGTTTACTCATCAGGTCTACACAACGTATTGTTTTAGTCCTGTGCGTTCa                <  1:390448/100‑1 (MQ=255)
                                                                                 gcgcTGCGAAGGATACAGTAACGCTCGAGAGTCAGCGTTGCGGGAAGCCGTTTACTCATCAGGTCTACACAACGTATTGTTTTAGTCCTGTGCGTTCAGa              >  2:526081/1‑100 (MQ=255)
                                                                                 gCGATGCGAAGGTGACAGTAACGCTCGAGTGTCAGCGTTGCGGGAAGCCGTTTACTCATCAGGTCTACACAACGTATTGTTTTAGTCCTGTGCGTTCAGa              >  1:2363627/1‑100 (MQ=255)
                                                                                  cGATGCGAAGGTGACAGTAACGCTCGAGTGTCAGCGTTGCGGGAAGCCGTTTACTCATCAGGTCTACACAACGTATTGTTTTAGTCCTGTGCGTTCAGAc             >  1:2552920/1‑100 (MQ=255)
                                                                                   gATGCGAAGGTGACAGTAACGCTCGAGTGTCAGCGTTGCGGGAAGCCGTTTACTCATCAGGTCTACACAACGTATTGTTTTAGTCCTGTGCGTTCAGACg            <  1:417812/100‑1 (MQ=255)
                                                                                   gATGCGAAGGTGACAGTAACGCTCGAGTGTCAGCGTTGCGGGAAGCCGTTTACTCATCAGGTCTACACAACGTATTGTTTTAGTCCTGTGCGTTCAGACg            >  2:2644673/1‑100 (MQ=255)
                                                                                     tGCGAAGGTGACAGTAACGCTCGAGTGTCAGCGTTGCGGGAAGCCGTTTACTCATCAGGTCTACACAACGTATTGTTTTAGTCCTGTGCGTTCAGACGaa          >  2:122313/1‑100 (MQ=255)
                                                                                      gCGAAGGTGACAGTAACGCTCGAGTGTCAGCGTTGCGGGAAGCCGTTTACTCATCAGGTCTACACAACGTATTGTTTTAGTCCTGTGCGTTCAGACGAAc         >  2:3124827/1‑100 (MQ=255)
                                                                                      gCGAAGGTGACAGTAACGCTCGAGTGTCAGCGTTGCGGGAAGCCGTTTACTCATCAGCTCTACACAACGTATTGTTTTAGTCCTGTGCGTTCAGACGagc         <  1:2586022/100‑3 (MQ=255)
                                                                                       cGAAGGTGACAGTAACGCTCGAGTGTCAGCGTTGCGGGAAGCCGTTTACTCATCAGGTCTACACAACGTATTGTTTTAGTCCTGTGCGTTCAGACGAACa        >  1:3238539/1‑100 (MQ=255)
                                                                                        gAAGGTGACAGTAACGCTCGAGTGTCAGCGTTGCGGGAAGCCGTTTACTCATCAGGTCTACACAACGTATTGTTTTAGTCCTGTGCGTTCAGACGAACAg       >  1:741857/1‑100 (MQ=255)
                                                                                           ggTGACAGTAACGCTCGAGTGTCAGCGTTGCGGGAAGCCGTTTACTCATCAGGTCTACACAACGTATTGTTTTAGTCCTGTGCGTTCAGACGAACAGGCt    <  1:2092363/100‑1 (MQ=255)
                                                                                           ggTGACAGTAACGCTCGAGTGTCAGCGTTGCGGGAAGCCGTTTACTCATCAGGTCTACACAACGTATTGTTTTAGTCCTGTGCGTTCAGACGAACAGGCt    <  1:2226670/100‑1 (MQ=255)
                                                                                           ggTGACAGTAACGCTCGAGTGTCAGCGTTGCGGGAAGCCGTTTACTCATCAGGTCTACACAACGTATTGTTTTAGTCCTGTGCGTTCAGACGAACAGGCt    <  2:2969102/100‑1 (MQ=255)
                                                                                             tGACAGTAACGCTCGAGTGTCAGCGTTGCGGGAAGCCGTTTACTCATCAGGTCTACACAACGTATTGTTTTAGTCCTGTGCGTTCAGACGAACAGGCTGa  <  2:135841/100‑1 (MQ=255)
                                                                                                 |                                                                                               
AATCCGTAGTCAGTGTGGACAGTGATGTGGAATGCTCCATGTCGTTCGCTATCGATAACCAACGTCTCGCAGTGTTAAACGGCGATGCGAAGGTGACGGTAACGCTCGAGTGTCAGCGTTGCGGGAAGCCGTTTACTCATCAGGTCTACACAACGTATTGTTTTAGTCCTGTGCGTTCAGACGAACAGGCTGA  >  NC_000913/1146900‑1147092

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: