| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,200,772 | A→G | 40.1% | V12A (GTC→GCC) | intE ← | e14 prophage; putative integrase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,200,772 | 0 | A | G | 40.1% | 72.7 / 151.3 | 138 | V12A (GTC→GCC) | intE | e14 prophage; putative integrase |
| Reads supporting (aligned to +/- strand): ref base A (41/41); new base G (24/31); total (65/73) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.90e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.18e-01 | |||||||||||
Only 100 of 140 total aligned reads displayed.
CGTTTGTTCCCAAAGCATGGAATTTTCCTGTCACTGGATGCTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGACTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCTTGATTACAGGTGTTACCAACTCCCCA > NC_000913/1200674‑1200871 | cGTTTGTTCCCAAAGCATGGAATTTTCCTGTCACTGGATGCTTATCCCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGAc < 2:3715695/100‑1 (MQ=255)cGTTTGTTCCCAAAGCATGGAATTTTCCTGTCACTGGATGCTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGAc < 2:49051/100‑1 (MQ=255) tttGTTCCCAAAGCATGGAATTTTCCTGTCACTGGATGCTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTg < 1:1363734/100‑1 (MQ=255) tttGTTCCCAAAGCATGGAATTTTCCTGTCACTGGATGCTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGACTg < 1:1669120/100‑1 (MQ=255) ttGTTCCCAAAGCATGGAATTTTCCTGTCACTGGATGCTTATACCGCCAATAGACTTTATTTACCTGCCTACTATAAAGCGGATATAAGTTAGGGACTGa < 2:2705552/100‑1 (MQ=255) tCCCAAAGCATGGAATTTTCCTGTCACTGGATGCTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACa < 1:2840384/100‑1 (MQ=255) cccAAAGCATGGAATTTTCCTGTCACTGGATGCTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACat < 1:3667878/100‑1 (MQ=255) cccAAAGCATGGAATTTTCCTGTCACTGGATGCTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACat > 2:2028015/1‑100 (MQ=255) cccAAAGCATGGAATTTTCCTGTCACTGGATGCTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACat > 1:1547907/1‑100 (MQ=255) cccAAAGCATGGAATTTTCCTGTCACTGGATGCTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACat > 1:360265/1‑100 (MQ=255) cccAAAGCATGGAATTTTCCTGTCACTGGATGCTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGACTGAAACat > 2:3668370/1‑100 (MQ=255) cAAAGCATGGAATTTTCCTGTCACTGGATGCTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGACTGAAACatta > 1:1276390/1‑100 (MQ=255) cAAAGCATGGAATTTTCCTATCACTGGATGCTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGACTGAAACatta < 2:10690/100‑1 (MQ=255) aaaGCATGGAATTTTCCTGTCACTGGATGCTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGACTGAAACattat < 1:1960250/100‑1 (MQ=255) gCATGGAATTTTCCTGTCACTGGATGCTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGACTGAAACATTATTCt < 2:2061177/100‑1 (MQ=255) gCATGGAATTTTCCTGTCACTGGATGCTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGACTGAAACATTATTCt < 1:3257686/100‑1 (MQ=255) aTGGAATTTTCCTGTCACTGGATGCTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGACTGAAACATTATTCTTa > 1:2881353/1‑100 (MQ=255) ggAATTTTCCTGTCACTGGATGCTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACATTATTCTTAcg > 1:3128068/1‑100 (MQ=255) ggAATTTTCCTGTCACTGGATGCTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGACTGAAACATTATTCTTAcg < 2:2650540/100‑1 (MQ=255) ggAATTTTCCTGTCACTGGATGCTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGACTGAAACATTATTCTTAcg > 1:1234727/1‑100 (MQ=255) ggAATTTTCCTGTCACTGGATGCTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGACTGAAACATTATTCTTAcg > 1:2378344/1‑100 (MQ=255) gAATTTTCCTGTCACTGGATGCTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACATTATTCTTAcgc < 1:2552514/100‑1 (MQ=255) gAATTTTCCTGTCACTGGATGCTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACATTATTCTTAcgc < 1:2552627/100‑1 (MQ=255) aaTTTTCCTGTCACTGGATGCTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACATTATTCTTAcgcg > 2:242354/1‑100 (MQ=255) atgtttcTGTCACTGGATGCTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGACTGCAACATTATTCTTAcgcg < 2:703346/93‑1 (MQ=255) tttCCTGTCACTGGATGCTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACATTATTCTTACGCGGTc > 2:2170224/1‑100 (MQ=255) tttCCTGTCACTGGATGCTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGACTGAAACATTATTCTTACGCGGTc > 1:1255732/1‑100 (MQ=255) cTGTCACTGGATGCTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACATTATTCTTACGCGGTCTGGc > 1:231145/1‑100 (MQ=255) cTGTCACTGGATGCTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACATTATTCTTACGCGGTCTGGc < 2:739302/100‑1 (MQ=255) tGTCACTGGATGCTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACATTATTCTTACGCGGTCTGGCt > 1:2072760/1‑100 (MQ=255) tGTCACTGGATGCTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGACTGAAACATTATTCTTACGCGGTCTGGCt > 2:1982041/1‑100 (MQ=255) gTCACTGGATGCTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACATTATTCTTACGCGGTCTGGCTg < 1:1149998/100‑1 (MQ=255) gTCACTGGATGCTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGACTGAAACATTATTCTTACGCGGTCTGGCTg < 2:3709176/100‑1 (MQ=255) gTCACTGGATGCTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGACTGAAACATTATTCTTACGCGGTCTGGCTg > 1:3325056/1‑100 (MQ=255) gTCACTGGATGCTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGACTGAAACATTATTCTTACGCGGTCTGGCTg > 2:445849/1‑100 (MQ=255) tCACTGGATGCTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGACTGAAACATTATTCTTACGCGGTCTGGCTGc > 1:3722684/1‑100 (MQ=255) cACTGGATGCTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACATTATTCTTACGCGGTCTGGCTGcc < 1:2264807/100‑1 (MQ=255) cACTGGATGCTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACATTATTCTTACGCGGTCTGGCTGcc > 1:3688711/1‑100 (MQ=255) aCTGGATGCTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACATTATTCTTACGTGGTCTGGCTGCCa < 1:2571417/100‑1 (MQ=255) cTGGATGCTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGACTGAAACATTATTCTTACGCGGTCTGGCTGCCAt > 1:3736410/1‑100 (MQ=255) tGGATGCTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGACTGAAACATTATTCTTACGCGGTCTGGCTGCCAtt < 1:1347106/100‑1 (MQ=255) gATGCTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGACTGAAACATTATTCTTACGCGGTCTGGCTGCCATTAc < 2:3721986/100‑1 (MQ=255) tGCTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGACTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTc > 1:2136326/1‑100 (MQ=255) cTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGACTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCaa < 2:499986/100‑1 (MQ=255) ttATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGACTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCaaa > 2:3388128/1‑100 (MQ=255) ataCCGCTAATAGACTTTATTTACCGTCCTACTATAAAGCGGATATGAGTTAGGGGCTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAAt < 2:2407164/100‑1 (MQ=255) taCCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCaaaa > 2:831997/1‑98 (MQ=255) taCCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGACTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATc < 1:3386534/100‑1 (MQ=255) taCCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGACTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATc > 1:1772300/1‑100 (MQ=255) taCCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGACTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATc > 1:3117516/1‑100 (MQ=255) taCCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGACTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATc < 2:3719119/100‑1 (MQ=255) ccGCCAATAGACTTTATTTACCTTCCTACTATACAGCGCATATCAGTTAGGGACTGAAACCTTCTTCTTCCGCGTCCTGGATCCACTTACTCAAAATcc > 2:3651951/1‑99 (MQ=255) cGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGt > 1:845342/1‑100 (MQ=255) cGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGACTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGt < 2:38344/100‑1 (MQ=255) gCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGtt < 2:1789554/100‑1 (MQ=255) gCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGACTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGtt < 2:214442/100‑1 (MQ=255) gCCAATAGACTTTATTTACCTTCCGACTATAAAGCGGATATAAGTTAGGGACTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGtt < 1:3236767/100‑1 (MQ=255) cAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTGAGGGACTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGc < 2:2448997/100‑1 (MQ=255) aCTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGACTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGt > 1:2986507/1‑100 (MQ=255) aCTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGACTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGt < 1:274525/100‑1 (MQ=255) aCTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGACTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGt > 2:584587/1‑100 (MQ=255) cTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTa > 1:2356982/1‑100 (MQ=255) cTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGACTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTa > 1:2726077/1‑100 (MQ=255) cTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGACTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTa < 2:808755/100‑1 (MQ=255) ttatttaCCTTCCTACTATAAAGCGGCTATAAGTTAGGGGCTGAAACCTTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAAt > 2:101010/1‑100 (MQ=255) tatttaCCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATg < 1:543318/100‑1 (MQ=255) tatttaCCTTCCTACTATAAAGCGGATATAAGTTAGGGACTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATg < 2:2136313/100‑1 (MQ=255) atttaCCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGa > 2:419880/1‑100 (MQ=255) tttaCCTTCCTACTATAAAGCGGATATAAGTTAGGGGCTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAg < 2:133994/100‑1 (MQ=255) tttaCCTTCCTACTATAAAGCGGATATAAGTTAGGGACTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAg < 1:947962/100‑1 (MQ=255) tttaCCTTCCTACTATAAAGCGGATATAAGGTAGGGACTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAg < 2:350626/100‑1 (MQ=255) tttaCCTTCCTACTAGAAAGCGGATATAAGTTAGGGACTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAg < 1:947887/100‑1 (MQ=255) taCCTTCCTACTATAAAGCGGATATAAGTTAGGGACTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTc < 1:389201/100‑1 (MQ=255) aCCTTCCTACTATAAAGCGGATATAAGTTAGGGACTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCa < 1:2751803/100‑1 (MQ=255) ttCCTACTATAAAGCGGATATAAGTTAGGGACTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCAttt > 1:3357836/1‑100 (MQ=255) ctactaTAAAGCGGATATAAGTTAGGGACTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTc > 1:3344962/1‑100 (MQ=255) ctactaTAAAGCGGATATAAGTTAGGGACTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTc > 1:849813/1‑100 (MQ=255) tactaTAAAGCGGATATAAGTTAGGGACTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCt > 2:1990596/1‑100 (MQ=255) actaTAAAGCGGATATAAGTTAGGGGCTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCtt < 2:3133367/100‑1 (MQ=255) actaTAAAGCGGATATAAGTTAGGGACTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCtt > 1:1591775/1‑100 (MQ=255) tataAAGCGGATATAAGTTAGGGACTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCTTGa < 2:1616860/100‑1 (MQ=255) ataAAGCGGATATAAGTTAGGGACTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCTTGAt < 1:1550255/100‑1 (MQ=255) taAAGCGGATATAAGTTAGGGACTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCTTGAtt > 2:1294278/1‑100 (MQ=255) aGCGGATATAAGTTAGGGGCTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCTTGATTACa > 2:610624/1‑100 (MQ=255) gCGGATATAAGTTAGGGGCTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCTTGATTACAg < 1:1347648/100‑1 (MQ=255) gCGGATATAAGTTAGGGACTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCTTGATTACAg < 1:3668397/100‑1 (MQ=255) gCGGATATAAGTTAGGGACTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCTTGATTACAg < 2:1939472/100‑1 (MQ=255) gATATAAGTTAGGGACTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCTTGATTACAGgtg < 1:683818/100‑1 (MQ=255) gATATAAGTTAGGGACTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCTTGATTACAGgtg < 2:1342506/100‑1 (MQ=255) tataAGTTAGGGGCTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCTTGATTACAGGTGtt < 1:2372322/100‑1 (MQ=255) taAGTTAGGGGCTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCTTGATTACAGGTGTTAc > 1:3569547/1‑100 (MQ=255) taAGTTAGGGACTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCTTGATTACAGGTGTTa > 1:3417299/1‑99 (MQ=255) taAGTTAGGGACTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCTTGATTACAGGTGTTAc > 1:772081/1‑100 (MQ=255) taAGTTAGGGACTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCTTGATTACAGGTGTTAc > 1:3566918/1‑100 (MQ=255) aGTTAGGGGCTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCTTGATTACAGGTGTTACCa < 1:108716/100‑1 (MQ=255) aGTTAGGGGCTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCTTGATTACAGGTGTTACCa > 2:32367/1‑100 (MQ=255) aGTTAGGGACTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCTTGATTACAGGTGTTACCa < 1:445853/100‑1 (MQ=255) ttAGGGGCTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCTTGATTACAGGTGTTACCAAc < 1:220731/100‑1 (MQ=255) ttAGGGGCTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCTTGATTACAGGTGTTACCAAc < 1:915139/100‑1 (MQ=255) aCTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCTTGATTACAGGTGTTACCAACTccccn < 2:727130/100‑2 (MQ=255) | CGTTTGTTCCCAAAGCATGGAATTTTCCTGTCACTGGATGCTTATACCGCCAATAGACTTTATTTACCTTCCTACTATAAAGCGGATATAAGTTAGGGACTGAAACATTATTCTTACGCGGTCTGGCTGCCATTACTCAAAATCCGTTGCAAAAGTAATGAGTCATTTTTCTTGATTACAGGTGTTACCAACTCCCCA > NC_000913/1200674‑1200871 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |