Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 1,315,803 C→T 16.2% intergenic (‑33/+53) yciF ← / ← yciG putative rubrerythrin/ferritin‑like metal‑binding protein/KGG family protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,315,8030CT16.2% 335.7 / 45.3 141intergenic (‑33/+53)yciF/yciGputative rubrerythrin/ferritin‑like metal‑binding protein/KGG family protein
Reads supporting (aligned to +/- strand):  ref base C (64/53);  new base T (16/7);  total (80/61)
Fisher's exact test for biased strand distribution p-value = 2.50e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.10e-01

Only 100 of 144 total aligned reads displayed.

GTTTTTCTGCGCTGTAGGTATCTGAAAGCAGGTGAATAAATACATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGCCTGATTTATTACCACCGCTTTGTTGACCGCCTTTT  >  NC_000913/1315704‑1315901
                                                                                                   |                                                                                                  
gTTTTTCTGCGCTGTAGGTATCTGAAAGCAGGTGAATAAATACATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATAc                                                                                                    <  2:3677783/100‑1 (MQ=255)
gTTTTTCTGCGCTGTAGGTATCTGAAAGCAGGTGAATAAATACATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATAc                                                                                                    <  1:3104441/100‑1 (MQ=255)
gTTTTTCTGCGCGGTAGGTATCTGAAAGCAGGTGAATAAATACATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATAc                                                                                                    >  1:2511281/1‑100 (MQ=255)
  ttttCTGCGCTGTAGGTATCTGAAAGCAGGTGAATACATACATCTTCTATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGGCATACgg                                                                                                  <  2:3648323/100‑1 (MQ=255)
  ttttCTGCGCTGTAGGTATCTGAAAGCAGGTGAATAAATACATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACgg                                                                                                  <  1:3220201/100‑1 (MQ=255)
      cTGCGCTGTAGGTATCTGAAAGCAGGTGAATAAATACATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCg                                                                                              >  1:586107/1‑100 (MQ=255)
       tGCGCTGTAGGTATCTGAAAGCAGGTGAATAAATACATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGc                                                                                             >  2:2817253/1‑100 (MQ=255)
        gcgcTGTAGGTATCTGAAAGCAGGTGAATAAATACATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCa                                                                                            <  1:635465/100‑1 (MQ=255)
         cgcTGTAGGTATCTGAACGCAGGTGAATAAATACATCTTCAATGGCCTTCATACTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGCCCCGc                                                                                             >  2:1725269/1‑98 (MQ=255)
         cgcTGTAGGTATCTGAAAGCAGGTGAATAAATACATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGGGCCGTATGGCTCGCAg                                                                                           <  1:2079211/100‑1 (MQ=255)
         cgcTGTAGGTATCTGAAAGCAGGTGAATAAATACATCTTCAATGGGCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGcc                                                                                                >  2:165595/1‑95 (MQ=255)
          gcTGTAGGTATCTGAAAGCAGGTGAATAAATACATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGa                                                                                          >  2:1292342/1‑100 (MQ=255)
          gcTGTAGGTATCTGAAAGCAGGTGAATAAATACATCTTCAATGGTATTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGc                                                                                             >  2:299063/1‑97 (MQ=255)
           cTGTAGGTATCTGAAAGCAGGTGAATAAATACATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGGGCCGTATGGCTCGCAgtg                                                                                         <  1:133307/100‑3 (MQ=255)
           cTGTAGGTATCTGAAAGCAGGTGAATAAATACATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGGGCCGTATGGCTCGCAgtg                                                                                         <  1:1010593/100‑3 (MQ=255)
           cTGTAGGTATCTGAAAGCAGGTGAATAAATACATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGGGCCGTATGGCTCGCAgt                                                                                          <  2:2547389/99‑2 (MQ=255)
           cTGTAGGTATCTGAAAGCAGGTGAATAAATACATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGAt                                                                                         <  1:1622957/100‑1 (MQ=255)
              tAGGTATCTGAAAGCAGGTGAATAAATACATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGGGCCGTATGGCTCGCAgtgatt                                                                                      <  1:834641/100‑6 (MQ=38)
              tAGGTATCTGAAAGCAGGTGAATAAATACATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGGGCCGTATGGCTCGCAgtgatt                                                                                      <  1:1778610/100‑6 (MQ=38)
               aGGTATCTGAAAGCAGGTGAATAAACACATCTCCAATGTTCTTCATCTTCATAGTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCaa                                                                                     <  2:2110922/100‑1 (MQ=255)
                ggTATCTGAAAGCAGGTGAATAAATACATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAAt                                                                                    <  2:525176/100‑1 (MQ=255)
                ggTATCTGAAAGCAGGTGAATAAATACATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAAt                                                                                    <  1:914286/100‑1 (MQ=255)
                ggTATCTGAAAGCAGGTGAATAAATACATATTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAAt                                                                                    <  1:2244595/100‑1 (MQ=255)
                  tATCTGAAAGCAGGTGAATAAATACATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTa                                                                                  <  2:1917664/100‑1 (MQ=255)
                   aTCTGAAAGCAGGTGAATAAATACATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTAt                                                                                 >  2:2864856/1‑100 (MQ=255)
                     cTGAAAGCAGGTGAATAAATACATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCACTTATCt                                                                               >  1:1251460/1‑100 (MQ=255)
                     cTGAAAGCAGGTGAATAAATACATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCt                                                                               >  2:53035/1‑100 (MQ=255)
                     cTGAAAGCAGGTGAATAAATACATCTTCAATGGTCTTCATATGCATATTTTTCTCCAGTGAAATTACTGCGAGCCATACGTCCCGCCGATGCAATTATCt                                                                               >  2:889561/1‑100 (MQ=255)
                      tGAAAGCAGGTGAATAAATACATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGTGCCATACGGCCCGCAGATTTAATTATCtt                                                                              >  2:3785194/1‑100 (MQ=255)
                       gAAAGCAGGTGAATAAATACATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCttt                                                                             >  2:843315/1‑100 (MQ=255)
                       gAAAGCAGGTGAATAAATACATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCttt                                                                             >  2:480295/1‑100 (MQ=255)
                         aaGCAGGTGAATAAATACATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTAt                                                                           <  1:1815324/100‑1 (MQ=255)
                          aGCAGGTGAATAAATACATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATc                                                                          <  1:1063711/100‑1 (MQ=255)
                          aGCAGGTGAATAAATACATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATc                                                                          <  1:2047528/100‑1 (MQ=255)
                           gCAGGTGAATAAATACATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCa                                                                         <  1:878866/100‑1 (MQ=255)
                               gTGAATAAATACATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTg                                                                     <  2:689577/100‑1 (MQ=255)
                               gTGAATAAATACATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTg                                                                     <  1:1818858/100‑1 (MQ=255)
                                 gAATAAATACATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGat                                                                   >  2:1921509/1‑100 (MQ=255)
                                  aataaataCATCATCAAGGTGCTTCATATTCATATGTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCt                                                                      <  2:2462612/96‑1 (MQ=255)
                                   ataaataCATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGatat                                                                 >  2:1010105/1‑100 (MQ=255)
                                    taaataCATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATAtt                                                                <  2:2853344/100‑1 (MQ=255)
                                      aataCATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATtaa                                                              >  2:2247350/1‑100 (MQ=255)
                                        taCATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATtaata                                                            <  1:3418225/100‑1 (MQ=255)
                                        taCATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATtaata                                                            <  2:2878486/100‑1 (MQ=255)
                                        taCATCTTCAATGGCCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATtaat                                                             >  2:3266179/1‑99 (MQ=255)
                                          cATCTTCAATGGTCTTCATATTCATATTTTTCTCAAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTaataat                                                          <  2:3067054/100‑1 (MQ=255)
                                               tCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACg                                                     >  1:2354273/1‑100 (MQ=255)
                                                 aaTGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGt                                                   <  1:390512/100‑1 (MQ=255)
                                                    ggTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGaa                                                >  2:1339629/1‑100 (MQ=255)
                                                      tCTTCATATTCATATTTTTCTCTAGTGTATTCACTGCGAACCATACGACCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTTAAt                                               >  2:2894596/1‑99 (MQ=255)
                                                      atctcatattcatatTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATc                                              <  2:2575167/97‑1 (MQ=255)
                                                       cTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCa                                             >  2:1480956/1‑100 (MQ=255)
                                                        ttcatattcataTTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAg                                            <  1:2929973/100‑1 (MQ=255)
                                                         tcatattcatatTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATCCAATTATCTTTATTAGCTGATATTAATAATTAACGGTGAATCAg                                            >  1:561157/1‑99 (MQ=255)
                                                          cgtattcatattTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAgat                                          >  1:2575186/3‑98 (MQ=255)
                                                           tctttcatattTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGAt                                         <  2:769370/97‑1 (MQ=255)
                                                           atattcttattTTTCTCCAGTGAAATCATTGCTAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGa                                          <  1:2341825/99‑1 (MQ=255)
                                                           atattcatattTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGAt                                         >  2:109328/1‑100 (MQ=255)
                                                            tattcattttTTTCTCCAGTGAAATCACTGCGAGCCATAAGGCCCGAAGATGCAATTATCTTTATCTGCTGATATTAATAATTAACGGTGAATCAGGAtt                                        <  2:201803/100‑1 (MQ=255)
                                                              ttcatattTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGAtaga                                      >  1:769378/1‑97 (MQ=255)
                                                              ttcatattTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTg                                      >  2:2826951/1‑100 (MQ=255)
                                                              ttcatattTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTg                                      >  2:273076/1‑100 (MQ=255)
                                                              ttcatattTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTg                                      >  2:273060/1‑100 (MQ=255)
                                                                catattTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGcc                                    <  1:2822177/100‑1 (MQ=255)
                                                                 atattTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGCCt                                   >  1:1706323/1‑100 (MQ=255)
                                                                 atattTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCACAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGCCt                                   >  2:3322427/1‑100 (MQ=255)
                                                                  tattTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGCCTg                                  >  2:1314303/1‑100 (MQ=255)
                                                                       ttCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGCCTGATtta                             <  1:1488530/100‑1 (MQ=255)
                                                                         ctcCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGCCTGATttatt                           >  1:3629229/1‑100 (MQ=255)
                                                                         ctcCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGCCTGATttatt                           <  1:3154749/100‑1 (MQ=255)
                                                                          tcCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGCCTGATttatta                          >  1:2983118/1‑100 (MQ=255)
                                                                          tcCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGCCTGATttatta                          >  1:2593547/1‑100 (MQ=255)
                                                                           ccAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGCCTGATTTATTac                         >  2:3795311/1‑100 (MQ=255)
                                                                           ccAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGCCTGATTTATTac                         >  1:3776819/1‑100 (MQ=255)
                                                                            cAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGCCTGATTTATTacc                        >  1:36933/1‑100 (MQ=255)
                                                                             aGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGCCTGATTTATTacca                       >  2:2451540/1‑100 (MQ=255)
                                                                              gTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGCCTGATTTATTaccac                      >  2:23365/1‑100 (MQ=255)
                                                                                  tgcatcTGCGGGCCGTATGGCTCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGCCTGATTTATTACCACCGCt                  >  1:1324079/6‑100 (MQ=38)
                                                                                  aaTCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGCCTGATTTATTACCACCGCt                  >  2:1601126/1‑100 (MQ=255)
                                                                                   aTCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGCCTGATTTATTACCACCGCtt                 >  2:2816623/1‑100 (MQ=255)
                                                                                   aTCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGCCTGATTTATTACCACCGCtt                 >  2:1844146/1‑100 (MQ=255)
                                                                                   aTCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGCCTGATTTATTACCACCGCtt                 >  1:1255005/1‑100 (MQ=255)
                                                                                   aTCACTGCGAGCCATACGGCCCGCAGAGGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGCCTGATTTATTACCACCGCtt                 <  1:299065/100‑1 (MQ=255)
                                                                                     cACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGCCTGATTTATTACCACCGCTttg               <  2:459527/100‑1 (MQ=255)
                                                                                     atcTGCGGGCCGTATGGCTCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGCCTGATTTATTACCACCGCTttg               >  1:2716091/3‑100 (MQ=255)
                                                                                     atcTGCGGGCCGTATGGCTCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGCCTGATTTATTACCACCGCTttg               >  1:1103508/3‑100 (MQ=255)
                                                                                      tcTGCGGGCCGTATGGCTCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGCCTGATTTATTACCACCGCTttgt              >  2:2197118/2‑100 (MQ=255)
                                                                                      tcTGCGGGCCGTATGGCTCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGCCTGATTTATTACCACCGCTttgt              >  1:3574299/2‑100 (MQ=255)
                                                                                      tcTGCGGGCCGTATGGCTCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGCCTGATTTATTACCACCGCTttg               >  1:2976428/2‑99 (MQ=255)
                                                                                       cTGCGGGCCGTATGGCTCGCAGATGCAATTATATTAATCAGCTGATATTGATAATTAACGGTGAAGCAGGCTTTGCCTGATTAATTACCACAACTttgtt             >  2:1258249/1‑100 (MQ=255)
                                                                                       cTGCGGGCCGTATGGCGCGCAGATGCAATTATCTTTATCAGGTGATATTACTAATAAACGGCGAAGCAGGATTTGACTGAGTTATTACCACCGCTtcgtt             >  2:953080/1‑100 (MQ=255)
                                                                                        tGCGGGCCGTATGGCTCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGCCTGATTTATTACCACCGCTttgttg            >  2:333445/1‑100 (MQ=255)
                                                                                        tGCGGGCCGTATGGCTCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGCCTGATTTATTACCACCGCTttgttg            >  1:451082/1‑100 (MQ=255)
                                                                                        tGCGGGCCGTATGGCTCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGCCTGATTTATTACCACCGCTttgttg            >  2:796557/1‑100 (MQ=255)
                                                                                        tGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGCCTGATTTATTACCACCGCTttgttg            <  2:57025/100‑1 (MQ=255)
                                                                                        tGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGCCTGATTTATTACCACCGCTttgttg            <  1:3437383/100‑1 (MQ=255)
                                                                                          cGAGCCATACGGCCCGCAGATGCAATTATCTGTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGCCTGATTTATTACCACCGCTTTGTTGAc          <  1:3788254/100‑1 (MQ=255)
                                                                                           gAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGCCTGATTTATTACCACCGCTTTGTTGAcc         <  1:1542620/100‑1 (MQ=255)
                                                                                            aGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGCCTGATTTATTACCACCGCTTTGTTGACCg        <  2:1676061/100‑1 (MQ=255)
                                                                                              ccATACGGCCCGCAGATGCAATTATCTTTATCAGCGGATATTAATAATTAACGGTGAATCAGGATTTGCCTGATTTATTACCACCGCTTTGTTGACCGcc      <  1:3098779/100‑1 (MQ=255)
                                                                                                   |                                                                                                  
GTTTTTCTGCGCTGTAGGTATCTGAAAGCAGGTGAATAAATACATCTTCAATGGTCTTCATATTCATATTTTTCTCCAGTGAAATCACTGCGAGCCATACGGCCCGCAGATGCAATTATCTTTATCAGCTGATATTAATAATTAACGGTGAATCAGGATTTGCCTGATTTATTACCACCGCTTTGTTGACCGCCTTTT  >  NC_000913/1315704‑1315901

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: