BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_000913	1,554,731	C→T	100%	M313I (ATG→ATA)	maeA ←	malate dehydrogenase, decarboxylating, NAD‑requiring; malic enzyme

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,554,731	0	C	T	100.0%	366.0 / NA	108	M313I (ATG→ATA)	maeA	malate dehydrogenase, decarboxylating, NAD‑requiring; malic enzyme
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (49/59); total (49/59)

Only 100 of 110 total aligned reads displayed.

CATCTTGTCAGTCAGCAAGCCAAAGCGATCGACCATAAAGACTTTCTGCCGCGCCGCTTCCTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATCATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAG  >  NC_000913/1554635‑1554826

cATCTTGTCAGTCAGCAAGCCAAAGCGATCGACCATAAAGACTTTCTGCCGCGCCGCTTCCTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGattatt                                                                                              <  2:2781821/100‑1 (MQ=255)

   cTTGTCAGTCAGCAAGCCAAAGCGATCGACCATAAAGACTTTCTGCCGCGCCGCTTCCTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATTATTTCg                                                                                           <  1:1990265/100‑1 (MQ=255)

    ttGTCAGTCAGCAAGCCAAAGCGATCGACCATTATGACTTTCTGCCGCGCCGCTTCCTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATTATTTCgg                                                                                          <  1:107546/100‑1 (MQ=255)

     tGTCAGTCAGCAAGCCAAAGCGATCGACCATAAAGACTTTCTGCCGCGCCGCTTCCTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATTATTTCGGc                                                                                         <  2:2889034/100‑1 (MQ=255)

     tGTCAGTCAGCAAGCCAAAGCGATCGACCATAAAGACTTTCTGCCGCGCCGCTTCCTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATTATTTCGGc                                                                                         >  1:1716774/1‑100 (MQ=255)

     tGTCAGTCAGCAACCCAAAGCGATCGACCATAAAGACTTTCTGCCGGGTCGCTTCCTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATTATTTCGGc                                                                                         <  2:70216/100‑1 (MQ=255)

      gtcagtcaGCAAGCCAAAGCGATCGACCATAAAGACTTTCTGCCGCGCCGCTTCCTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATTATTTCGGCa                                                                                        <  1:3683128/100‑1 (MQ=255)

        cagtcagCAAGCCAAAGCGATCGACCATAAAGACTTTCTGCCGCGCCGCTTCCTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATTATTTCGGCAAt                                                                                      <  2:1933377/100‑1 (MQ=255)

        cagtcagCAAGCCAAAGCGATCGACCATAAAGACTTTCTGCCGCGCCGCTTCCTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATTATTTCGGCAAt                                                                                      >  2:285085/1‑100 (MQ=255)

        cagtcagCAAGCCAAAGCGATCGACCATAAAGACTTTCTGCCGCGCCGCTTCCTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATTATTTCGGCAAt                                                                                      >  1:3697605/1‑100 (MQ=255)

        cagtcagCAAGCCAAAGCGATCGACCATAAAGACTTTCTGCCGCGCCGCTTCCTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATTATTTCGGCAAt                                                                                      >  1:2013065/1‑100 (MQ=255)

         agtcagCAAGCCAAAGCGATCGACCATAAAGACTTTCTGCCGCGCCGCTTCCTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATTATTTCGGCAATg                                                                                     <  2:2753810/100‑1 (MQ=255)

         agtcagCAAGCCAAAGCGATCGACCATAAAGACTTTCTGCCGCGCCGCTTCCTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATTATTTCGGCAATg                                                                                     >  2:1034128/1‑100 (MQ=255)

          gtcagCAAGCCAAAGCGATCGACCATAAAGACTTTCTGCCGCGCCGCTTCCTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATTATTTCGGCAATGc                                                                                    >  2:2376918/1‑100 (MQ=255)

             agCAAGCCAAAGCGATCGACCATAAAGACTTTCTGCCGCGCCGCTTCCTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATTATTTCGGCAATGCCGc                                                                                 >  2:3494975/1‑100 (MQ=255)

              gCAAGCCAAAGCGATCGACCATAAAGACTTTCTGCCGCGCCGCTTCCTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATTATTTCGGCAATGCCGCa                                                                                >  1:3378567/1‑100 (MQ=255)

              gCAAGCCAAAGCGATCGACCATAAAGACTTTCTGCCGCGCCGCTTCCTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATTATTTCGGCAATGCCGCa                                                                                >  2:3621835/1‑100 (MQ=255)

               cAAGCCAAAGCGATCGACCATAAAGACTTTCTGCCGCGCCGCTTCCTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATTATTTCGGCAATGCCGCAt                                                                               <  1:2701145/100‑1 (MQ=255)

                aaGCCAAAGCGATCGACCATAAAGACTTTCTGCCGCGCCGCTTCCTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATTATTTCGGCAATGCCGCATc                                                                              >  1:195073/1‑100 (MQ=255)

                 ngCCAAAGCGATCGACCATAAAGACTTTCTGCCGCGCCGCTTCCTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATTATTTCGGCAATGCCGCATcc                                                                             >  2:595714/2‑100 (MQ=255)

                 aGCCAAAGCGATCGACCATAAAGACTTTCTGCCGCGCCGCTTCCTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATTATTTCGGCAATGCCGCATcc                                                                             >  2:1982172/1‑100 (MQ=255)

                  gCCAAAGCGATCGACCATAAAGACTTTCTGCCGCGCCGCTTCCTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATTATTTCGGCAATGCCGCATccc                                                                            >  1:779736/1‑100 (MQ=255)

                   ccAAAGCGATCGACCATAAAGACTTTCTGCCGCGCCGCTTCCTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATTATTTCGGCAATGCCGCATCCCg                                                                           <  1:526651/100‑1 (MQ=255)

                    cAAAGCGATCGACCATAAAGACTTTCTGCCGCGCCGCTTCCTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATTATTTCGGCAATGCCGCATCCCGc                                                                          <  1:1180562/100‑1 (MQ=255)

                    cAAAGCGATCGACCATAAAGACTTTCTGCCGCGCCGCTTCCTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATTATTTCGGCAATGCCGCATCCCGc                                                                          >  1:249398/1‑100 (MQ=255)

                    cAAAGCGATCGACCATAAAGACTTTCTGCCGCGCCGCTTCCTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATTATTTCGGCAATGCCGCATCCCGc                                                                          <  1:2840968/100‑1 (MQ=255)

                     aaaGCGATCGACCATAAAGACTTTCTGCCGCGCCGCTTCCTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATTATTTCGGCAATGCCGCATCCCGCt                                                                         <  1:2486695/100‑1 (MQ=255)

                     aaaGCGATCGA‑CATAAAGACTTTCTGCCGCGCCGCTTCCTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATTATTTCGGCAATGCCGCATCCCGCTg                                                                        <  2:425736/100‑1 (MQ=255)

                       aGCGATCGACCATAAAGACTTTCTGCCGCGCCGCTGCCTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATTATTTCGGCAATGCCGCATCCCGCTGa                                                                       <  2:3411718/100‑1 (MQ=255)

                        gCGATCGACCATAAAGACTTTCTGCCGCGCCGCTTCCTCGCTTAATCCTTCGCGCTGGTTCTGGGAGATGATTATTTCGGCAATGCCGCATCCCGCTGaa                                                                      <  2:2084392/100‑1 (MQ=255)

                        gCGATCGAACATAAAGCTCTGCCGCCGCGCGGCTTCTTCGCTTAATCCTACGCGCGGGGGCTGGGAGATGATTATTTCGGCAATGCCGCa                                                                                <  2:1711323/90‑1 (MQ=255)

                         cGATCGACCATAAAGACTTTCTGCCGCGCCGCTTCCTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATTATTTCGGCAATGCCGCATCCCGCTGAAc                                                                     <  2:3595659/100‑1 (MQ=255)

                          gATCGACCATAAAGACTTTCTGCCGCGCCGCTTCCTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATTATTTCGGCAATGCCGCATCCCGCTGAAcc                                                                    <  1:893978/100‑1 (MQ=255)

                          gATCGACCATAAAGACTTTCTGCCGCGCCGCTTCCTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATTATTTCGGCAATGCCGCATCCCGCTGAAcc                                                                    >  1:256034/1‑100 (MQ=255)

                          gATCGACCATAAAGACTTTCTGCCGCGCCGCTTCCTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATTATTTCGGCAATGCCGCATCCCGCTGAAcc                                                                    <  1:1987962/100‑1 (MQ=255)

                              gACCATAAAGACTTTCTGCCGCGCCGCTTCCTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATTATTTCGGCAATGCCGCATCCCGCTGAACCTgcg                                                                >  2:3579481/1‑100 (MQ=255)

                              gACCATAAAGACTTTCTGCCGCGCCGCTTCCTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATTATTTCGGCAATGCCGCATCCCGCTGAACCTgcg                                                                <  1:3487565/100‑1 (MQ=255)

                               aCCATAAAGACTTTCTGCCGCGCCGCTTCCTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATTATTTCGGCAATGCCGCATCCCGCTGAACCTgcgc                                                               >  2:3603106/1‑100 (MQ=255)

                               aCCATAAAGACTTTCTGCCGCGCCGCTTCCTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATTATTTCGGCAATGCCGCATCCCGCTGAACCTgcgc                                                               <  2:1954500/100‑1 (MQ=255)

                                ccATAAAGACTTTCTGCCGCGCCGCTTCCTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATTATTTCGGCAATGCCGCATCGCGCTGAACCTgcgc                                                               >  1:3767298/1‑99 (MQ=255)

                                   tAAAGACTTTCTGCCGCGCCGCTTCCTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATTATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAg                                                           >  2:537818/1‑100 (MQ=255)

                                   tAAAGACTTTCTGCCGCGCCGCTTCCTCGCTTAATCCTTCGCGCTGGGCCTGGGAGAGGATTAGTTCGGCAATGCCGCGTCCCGCTGAACCTGCGCCaa                                                            >  2:3525836/1‑99 (MQ=255)

                                    aaaGACTTTCTGCCGCGCCGCTTCCTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATTATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAgg                                                          <  1:1750057/100‑1 (MQ=255)

                                     aaGACTTTCTGCCGCGCCGCTTCCTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATTATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGa                                                         >  1:1205019/1‑100 (MQ=255)

                                     aaGACTTTCTGCCGCGCCGCTTCCTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATTATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGa                                                         >  2:3377159/1‑100 (MQ=255)

                                      aGACTTTCTGCCGCGCCGCTTCCTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATTATTTCGGCAATGCCGCATCCCGCTGAACCTGCTCCAAGGaa                                                        <  1:722316/100‑1 (MQ=255)

                                       gACTTTCTGCCGCGCCGCTTCCTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATTATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGaa                                                        <  1:2055839/99‑1 (MQ=255)

                                       gACTTTCTGCCGCGCCGCTTCCTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATTATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAg                                                       <  1:475052/100‑1 (MQ=255)

                                         cTTTCTGCCGCGCCGCTTCCTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATTATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGAc                                                     <  1:1341955/100‑1 (MQ=255)

                                         cTTTCTGCCGCGCCGCTTCCTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATTATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGAc                                                     >  2:3542688/1‑100 (MQ=255)

                                          tttCTGCCGCGCCGCTTCCTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATTATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACg                                                    <  1:536831/100‑1 (MQ=255)

                                          tttCTGCCGCGCCGCTTCCTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATTATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACg                                                    <  1:1829664/100‑1 (MQ=255)

                                          tttCTGCCGCGCCGCTTCCTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATTATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACg                                                    <  1:408886/100‑1 (MQ=255)

                                              tGCCGCGCCGCTTCCTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATTATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGAttt                                                <  1:1705387/100‑1 (MQ=255)

                                               gccgcgccgcTTCCTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATTATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGAtttt                                               >  1:150444/1‑100 (MQ=255)

                                               gccgcgccgcTTCCTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATTATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGAtttt                                               <  1:2545624/100‑1 (MQ=255)

                                                ccgcgccncTTCCTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATTATTTCGGCACTGCCGCATCCCGCTGAACCTGCGCCCAGGAAGACGAttttt                                              >  2:502012/1‑100 (MQ=255)

                                                ccgcgccgcTTCCTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATTATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGAttttt                                              <  2:262460/100‑1 (MQ=255)

                                                ccgcgccgcTTCCTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATTATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGAttttt                                              >  2:3636247/1‑100 (MQ=255)

                                                 cgcgccgcTTCCTCGGTTAATCCTTCGCGCTGGGTCTGGGAGATGATTATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGAtttttt                                             <  1:3755701/100‑1 (MQ=255)

                                                 cgcgccgcTTCCTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGCTTATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGAtttttt                                             >  2:2025289/1‑100 (MQ=255)

                                                  gcgccgcTTCCTCGCTTAATCCTTCGCGCTTGCCCTGGGAGATGATTATTTCGGCAATGCCGCATCACGCTGAACCTGCGCCAAGGAAGACGAtttttt                                             <  2:1719289/99‑1 (MQ=255)

                                                   cgccgcTTCCTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATTATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTtc                                           <  1:1238154/100‑1 (MQ=255)

                                                    gccgcTTCCTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATTATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTtct                                          <  2:2997714/100‑1 (MQ=255)

                                                     ccgcTTCCTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATTATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTtctc                                         <  1:3391134/100‑1 (MQ=255)

                                                       gcTTCCTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATTATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTCTCGc                                       <  1:722494/100‑1 (MQ=255)

                                                       gcTTCCTCGCTTAATCCTTCGCGCTGCGTGTGGGAGATGATTATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTCTCGc                                       <  2:2302418/100‑1 (MQ=255)

                                                        cTTCCTCGCTAAATCCTTCGCGCTGGGTCTGGGAGATGATTATTTCGGCAATGCCGCATCCCGCTGGACCTGCGCCAAGGAAGACGATTTTTTTCTCGCt                                      <  2:2504016/100‑1 (MQ=255)

                                                          tCCTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATTATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTCTCGCTTa                                    <  2:600494/100‑1 (MQ=255)

                                                           ccTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATTATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTCTCGCTTaa                                   >  2:1778043/1‑100 (MQ=255)

                                                            cTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATTATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTCTCGCTTAAc                                  >  1:5795/1‑100 (MQ=255)

                                                             tCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATTATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTCTCGCTTAACt                                 <  1:331162/100‑1 (MQ=255)

                                                             tCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATTATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTCTCGCTTAACt                                 >  2:3332886/1‑100 (MQ=255)

                                                              cGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATTATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTCTCGCTTAACTg                                >  2:2429853/1‑100 (MQ=255)

                                                               gCTTAATCCTTCGCGCTGGGTCTGGGAGATGATTATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTCTCGCTTAACTGa                               >  1:1075584/1‑100 (MQ=255)

                                                                cTTAATCCTTCGCGCTGGGTCTGGGAGATGATTATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCTAGGAAGACGATTTGTTTTTTGCTTAACTGac                              >  2:3184226/1‑100 (MQ=255)

                                                                 ttAATCCTTCGCGCTGGGTCTGGGAGATGATTATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTCTCGCTTAACTGacc                             >  1:3304616/1‑100 (MQ=255)

                                                                    aTCCTTCGCGCTGGGTCTGGGAGATGATTATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTCTCGCTTAACTGaccacc                          >  1:2710373/1‑100 (MQ=255)

                                                                      ccTTCGCGCTGGGTCTGGGAGATGATTATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTCTCGCTTAACTGACCACCt                         >  1:691682/1‑99 (MQ=255)

                                                                       cTTCGCGCTGGGTCTGGGAGATGATTATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTCTCGCTTAACTGACCACCt                         >  2:588406/1‑98 (MQ=255)

                                                                       cTTCGCGCTGGGTCTGGGAGATGATTATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTCTCGCTTAACTGACCACCTGc                       >  1:484093/1‑100 (MQ=255)

                                                                       cTTCGCGCTGGGTCTGGGAGATGATTATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTCTCGCTTAACTGACCACCTGc                       >  1:3468290/1‑100 (MQ=255)

                                                                             gcTGGGTCTGGGAGATGATTATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTCTCGCTTAACTGACCACCTGCcgcgcg                 <  1:2783093/100‑1 (MQ=255)

                                                                              cTGGGTCTGGGAGATGATTATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTCTCGCTTAACTGACCACCTGCCGCGCgg                <  1:2338405/100‑1 (MQ=255)

                                                                              cTGGGTCTGGGAGATGATTATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTCTCGCTTAACTGACCACCTGCCGCGCgg                <  1:3579508/100‑1 (MQ=255)

                                                                              cTGGGTCTGGGAGATGATTATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTCTCGCTTAACTGACCACCTGCCGCGCgg                <  1:3329217/100‑1 (MQ=255)

                                                                                gggTCTGGGAGATGATTATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCt              >  1:153881/1‑100 (MQ=255)

                                                                                   tCTGGGAGATGATTATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTtgc           <  1:3381048/100‑1 (MQ=255)

                                                                                   tCTGGGAGATGATTATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTtgc           >  1:2726670/1‑100 (MQ=255)

                                                                                     tGGGAGATGATTATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTtgctg         <  2:909126/100‑1 (MQ=255)

                                                                                     tGGGAGATGATTATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTtgctg         >  1:2466481/1‑100 (MQ=255)

                                                                                      gggAGATGATTATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTtgctgc        <  1:635983/100‑1 (MQ=255)

                                                                                      gggAGATGATTATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTtgctgc        <  1:883954/100‑1 (MQ=255)

                                                                                       ggAGATGATTATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCg       <  2:3040399/100‑1 (MQ=255)

                                                                                        gagaTGATTATTTCGGCAATGCCGCATCCCGCGGAACCTGCGCCAAGGAAGACGATTTTTGTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGa      >  1:3045738/1‑100 (MQ=255)

                                                                                          gatgatgatTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTtgctgc        <  2:1207136/96‑1 (MQ=255)

                                                                                          gatgatTATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATc    <  1:1854973/100‑1 (MQ=255)

                                                                                            tgatTATTTCGGCAATGCCGCATCCCGCTGAACGTGCGCCAAGGAAGACGATTTTTTTTTTTTTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAg  >  2:2511864/1‑100 (MQ=255)

                                                                                            tgatTATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAg  <  1:1820/100‑1 (MQ=255)

                                                                                            tgatTAGTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAg  <  1:3142387/100‑1 (MQ=255)

CATCTTGTCAGTCAGCAAGCCAAAGCGATCGACCATAAAGACTTTCTGCCGCGCCGCTTCCTCGCTTAATCCTTCGCGCTGGGTCTGGGAGATGATCATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAG  >  NC_000913/1554635‑1554826

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`