| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,770,203 | T→A | 19.0% | intergenic (+17/‑412) | ydiK → / → ydiL | UPF0118 family inner membrane protein/putative HTH domain DNA‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,770,203 | 0 | T | A | 19.0% | 327.0 / 70.1 | 144 | intergenic (+17/‑412) | ydiK/ydiL | UPF0118 family inner membrane protein/putative HTH domain DNA‑binding protein |
| Reads supporting (aligned to +/- strand): ref base T (51/65); new base A (15/12); total (67/77) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.93e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.40e-01 | |||||||||||
Only 100 of 147 total aligned reads displayed.
GTGGAAGAAGTCCCGCCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGCTTACCGCCATTCAGCTGGTAGTACCTGTCGCAAATT > NC_000913/1770106‑1770302 | gtggAAGAAGTCCCGCCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGctct > 1:3307503/1‑100 (MQ=255) aagaagTCCCGCCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTgccg < 1:3627517/100‑1 (MQ=255) aagaagTCCCGCCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTgccg < 2:3083583/100‑1 (MQ=255) gaagTCCCGCCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTgccgcc < 2:12536/100‑1 (MQ=255) agTCCCGCCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTACCGCCTg > 2:1265033/1‑100 (MQ=255) gTCCCGCCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGa > 2:3390794/1‑100 (MQ=255) tCCCGCCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCAGAGCCGCCTGAt < 2:673661/100‑1 (MQ=255) tCCCGCCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCAGAGCCGCCTGAt < 1:2789011/100‑1 (MQ=255) tCCCGCCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCAGAGCCGCCTGAt < 1:2348412/100‑1 (MQ=255) tCCCGCCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCAGAGCCGCCTGAt < 1:1804682/100‑1 (MQ=255) tCCCGCCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCAGAGCCGCCTGAt < 1:1779899/100‑1 (MQ=255) cccGCCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGAtt > 1:226716/1‑100 (MQ=255) cccGCCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGAtt > 2:3165314/1‑100 (MQ=255) cccGCCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCAGAGCCGCCTGAtg < 1:1379982/100‑2 (MQ=255) ccgccgccgACGGACCAACCGGAATAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCAGAGCCGCCTGAtga < 1:552201/100‑3 (MQ=255) ccgccgccgACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTg > 2:3513823/1‑100 (MQ=255) ccgccgccgACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTg < 2:1667424/100‑1 (MQ=255) ccgccgccgACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTg < 2:3406514/100‑1 (MQ=255) ccgccgccgACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCAGAGCCGCCTGAtga < 1:1721099/100‑3 (MQ=255) cgccgccgACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGt < 1:3390820/100‑1 (MQ=255) ccgccgACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTa < 2:1157015/100‑1 (MQ=255) cgccgAGGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAGTCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGAt < 2:2657048/94‑1 (MQ=255) ccgACGGAGCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAacc < 2:1147188/100‑1 (MQ=255) ccgACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAacc < 2:1903983/100‑1 (MQ=255) cgACGGTCCACCCGGAAGAAATTCTCGAAGAACTTGGCGAGATAGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGAt < 2:2657163/91‑1 (MQ=255) aCGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAaccacc < 1:499739/100‑1 (MQ=255) gACCAGCCGGAAGAAAGTCTCGAAGAACGTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGc < 2:3308049/99‑1 (MQ=255) gACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCt > 1:3394161/1‑100 (MQ=255) gACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCt < 2:151810/100‑1 (MQ=255) aCCAACCGGAAGAAATTCTCGAATAACTTGGCTAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGTCACTTGTATGTCAACCACCg < 2:1702300/97‑1 (MQ=255) cAACCGGAAGAAATTCTCGAAGAACTTGGCGCAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTa > 2:3429688/1‑98 (MQ=255) ccGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGa < 1:424039/100‑1 (MQ=255) aagaaATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATAtt < 2:2819133/100‑1 (MQ=255) agaaATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCATGATTGTTAACCACCGCTAATTGATAttt > 1:3118251/1‑100 (MQ=255) gaaATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCATGATTGTTAACCACCGCTAATTGATAttt < 2:563621/99‑1 (MQ=255) aaaTTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCCCTGCCGCCTGATTGTTAACCACCGCTAATTGATATttgc > 1:1617764/1‑100 (MQ=255) aaTTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATttgct > 1:863002/1‑100 (MQ=255) aTTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATttgctt < 1:1448272/100‑1 (MQ=255) aTTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCAGCCTGATTGTTAACCTCCGCTAATTGATATttgctt > 2:3089712/1‑100 (MQ=255) ttCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATttgcttg < 1:950043/100‑1 (MQ=255) tctcGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATttgcttgc < 2:285756/100‑1 (MQ=255) ctcGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTtgcttgct < 1:1391511/100‑1 (MQ=255) tcGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGctc < 2:110918/100‑1 (MQ=255) cGAAGAACTTGGCGAGATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGctct < 2:2205703/100‑1 (MQ=255) cGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGctct < 2:1388041/100‑1 (MQ=255) cGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGctct > 1:3440023/1‑100 (MQ=255) cGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGctct > 1:1504453/1‑100 (MQ=255) gaaCTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTccc < 1:3220822/100‑1 (MQ=255) ttGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCata > 2:1519687/1‑100 (MQ=255) tGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCatat < 1:1936103/100‑1 (MQ=255) ggCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATAtt < 2:862993/100‑1 (MQ=255) gCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATAttt > 2:1715610/1‑100 (MQ=255) cGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATAtttt > 2:113656/1‑100 (MQ=255) cGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTATGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATAtttt > 1:811662/1‑100 (MQ=255) gAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTc > 2:1792659/1‑100 (MQ=255) aTCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTTCTCTTCCCCATATTTTCCTg < 2:2338726/100‑1 (MQ=255) tCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGc > 1:1196447/1‑100 (MQ=255) tCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGc < 1:2125651/100‑1 (MQ=255) gagaAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGCtt > 2:3223069/1‑100 (MQ=255) gagaAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGCtt > 1:139410/1‑100 (MQ=255) gaAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGCTTa > 2:922531/1‑99 (MQ=255) aaaCCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGCTTAcc > 2:1381719/1‑100 (MQ=255) gAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGCTTACCGCCAt < 1:439740/100‑1 (MQ=255) aaTAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGCTTACCGCCAtt < 2:3778875/100‑1 (MQ=255) aaTAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGCTTACCGCCAtt < 1:2097300/100‑1 (MQ=255) aTAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGCTTACCGCCATTc < 2:163169/100‑1 (MQ=255) tAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGCTTACCGCCATTCa < 1:3566038/100‑1 (MQ=255) tAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGCTTACCGCCATTCa > 1:1347588/1‑100 (MQ=255) aaGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGCTTACCGCCATTCa > 1:3704947/1‑99 (MQ=255) aaGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGCTTACCGCCATTCAg < 2:897503/100‑1 (MQ=255) aGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTCCTTGCTCTTCCCCATATTTTCCTGCTTACCGCCATTCAGc > 2:2362728/1‑100 (MQ=255) gTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGCTTACCGCCATTCAGCt < 2:49938/100‑1 (MQ=255) gTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGCTTACCGCCATTCAGCt > 2:2200512/1‑100 (MQ=255) gTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGCTTACCGCCATTCAGCt < 1:2491562/100‑1 (MQ=255) tAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGCTTACCGCCATTCAGCTg < 1:1075762/100‑1 (MQ=255) tAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGCTTACCGCCATTCAGCTg > 1:1337847/1‑100 (MQ=255) tAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGCTTACCGCCATTCAGCTg < 2:1137304/100‑1 (MQ=255) tAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGCTTACCGCCATTCAGCTg < 1:2136572/100‑1 (MQ=255) aaTTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGCTTACCGCCATTCAGCTgg < 1:590568/100‑1 (MQ=255) tttCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTTCTGCTTACCGCCATTCAGCTGgta > 1:3818078/1‑100 (MQ=255) tttCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGCTTACCGCCATTCAGCTGgta < 2:2963949/100‑1 (MQ=255) tttCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCACATATTTTCCTGCTTACCGCCATCCAGCTGgt > 2:3565799/1‑99 (MQ=255) taacaatcaGGCGGCAGAGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGCTTACCGCCATTCAGCTGgtag > 1:1879185/6‑100 (MQ=38) taacaatcaGGCGGCAGAGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGCTTACCGCCATTCAGCTGgtag > 2:2143985/6‑100 (MQ=38) aacaatcaGGCGGCAGAGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGCTTACCGCCATTCAGCTGgtagt > 1:1207575/5‑100 (MQ=38) acaatgaGGCGGCAGAGCCGCCTGATTGTTAAACACCGCTAATTGGTATTTGCTTGCTCTTCCCCATATATTCCTGCTTGCCGGCATTCAGCTGgtagta > 2:1787840/7‑100 (MQ=255) acaatcaGGCGGCAGAGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGCTTACCGCCATTCAGCTGgtagta > 1:2255135/4‑100 (MQ=38) caatcaGGCGGCAGAGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCGTGCTTTGCGCCATTCATCTTGTAGTAc > 1:2079805/3‑100 (MQ=255) caatcaGGCGGCAGAGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCCTGCTCTTCCCCATATTTTCCTGCTTACCGCCATTCAGCTGGTAGTAc > 2:359427/3‑100 (MQ=255) catcaGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGCTTACCGCCATTCAGCTGGTAGTAcc < 1:3503588/100‑1 (MQ=255) catcaGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGCTTACCGCCATTCAGCTGGTAGTAcc < 2:2904235/100‑1 (MQ=255) atcaGGCGGCAGAGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGCTTACCGCCATTCAGCTGGTAGTACCt > 1:1535665/1‑100 (MQ=255) atcaGGCGGCAGAGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGCTTACCGCCATTCAGCTGGTAGTACCt > 1:275915/1‑100 (MQ=255) atcaGGCGGCAGAGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTACCAATATTTTCCTGCTTACCGCCATTCACTTGctagt > 2:3008766/1‑96 (MQ=255) aGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGCTTACCGCCATTCAGCTGGTAGTACCTGTc < 2:2151156/100‑1 (MQ=255) ggcggcTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTTCCCATATTTTCCTGCTTACCGCCATTCAGCTGGTAGTACCTGTCg > 2:2713296/1‑100 (MQ=255) ggcggcTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGCTTACCGCCATTCAGCTGGTAGTACCTGTCg > 1:164247/1‑100 (MQ=255) ggcggcTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGCTTACCGCCATTCAGCTGGTAGTACCTGTCg < 2:3212471/100‑1 (MQ=255) gcggcTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGCTTACCGCCATTCAGCTGGTAGTACCTGTCGc > 1:137079/1‑100 (MQ=255) gcTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGCTTACCGCCATTCAGCTGGTAGTACCTGTCGCaaa > 1:1830441/1‑100 (MQ=255) | GTGGAAGAAGTCCCGCCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAATTTCTCATCAGGCGGCTCTGCCGCCTGATTGTTAACCACCGCTAATTGATATTTGCTTGCTCTTCCCCATATTTTCCTGCTTACCGCCATTCAGCTGGTAGTACCTGTCGCAAATT > NC_000913/1770106‑1770302 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |