| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 383,897 | C→T | 18.2% | M13I (ATG→ATA) ‡ | yaiP ← | putative family 2 glycosyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 383,897 | 0 | C | T | 18.2% | 347.9 / 59.7 | 153 | M13I (ATG→ATA) | yaiP | putative family 2 glycosyltransferase |
| Reads supporting (aligned to +/- strand): ref base C (69/56); new base T (20/8); total (89/64) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.40e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.64e-01 | |||||||||||
Only 100 of 156 total aligned reads displayed.
CAGACACGGGCCTTCGTTATACGCAGGTATAATGGCGTCAATACAGCCTTTCTTTTGACTGGGTTTACGTCTTAGCGTACTTAAAAACCATAGCAACATTGCTATGGACATACAGATAAATATCCAGGTTTTCATGCAATTTGCTCAAAGAATCATTTTATGAATTACAAAGCCTTCACCCAGATCGCTATTGACC > NC_000913/383801‑383996 | aGACACGGGCCTTCGTTATACGCAGGTATAATGGCGTCAATACTGCCTTTCTTTTGACTGGGTTTACGTCTTAGCGTACTTAAAAACCATAGCAACATTg < 1:3688369/100‑1 (MQ=255) gACACGGGCCTTCGTTATACGCAGGTATAATGGCGTCAATACAGCCTTTCTTTTGACTGGGTTTACGTCTTAGCGTACTTAAAAACCATAGCAACATTGc < 2:476301/100‑1 (MQ=255) gACACGGGCCTTCGTTATACGCAGGTATAATGGCGTCAATACAGCCTTTCTTTTGACTGGGTTTACGTCTTAGCGTACTTAAAAACCATAGCAACATTGc > 1:2051141/1‑100 (MQ=255) acGGGCCTTCGTTATACGCAGGTATAATGGCGTCAATACAGCCTTTCTTTTGACTGGGTTTACGTCTTAGCGTACTTAAAAACCATAGCAACATTGCTAt > 2:2084227/1‑100 (MQ=255) cGGGCCTTCGTTATACGCAGGTATAATGGCGTCAATACAGCCTTTCTTTTGACTGGGTTTACGTCTTAGCGTACTTAAAAACCATAGCAACATTGCTa < 2:2264618/98‑1 (MQ=255) cGGGCCTTCGTTATACGCAGGTATAATGGCGTCAATACAGCCTTTCTTTTGACTGGGTTTACGTCTTAGCGTACTTAAAAACCATAGCAACATTGCTATg > 1:3353907/1‑100 (MQ=255) cGGGCCTTCGTTATACGCAGGTATAATGGCGTCAATACAGCCTTTCTTTTGACTGGGTTTACGTCTTAGCGTACTTAAAAACCATAGCAACATTGCTATg > 2:2817984/1‑100 (MQ=255) ggCCTTCGTTATACGCAGGTATAATGGCGTCAATACAGCCTTTCTTTTGACTGGGTTTACGTGTTAGCGTACTTAAAAACCATAGCAATGTTGCTATggt < 2:2040618/100‑2 (MQ=255) ggCCTTCGTTATACGCAGGTATAATGGCGTCAATACAGCCTTTCTTTTGACTGGGTTTACGTCTTAGCGTACTTAAAAACCATAGCAACATTGCTATGGa < 1:479810/100‑1 (MQ=255) ggCCTTCGTTATACGCAGGTATAATGGCGTCAATACAGCCTTTCTTTTGACTGGGTTTACGTCTTAGCGTACTTAAAAACCATAGCAACATTGCTATGGa > 1:2945243/1‑100 (MQ=255) ggCCTTCGTTATACGCAGGTATAATGGCGTCAATACAGCCTTTCTTTTGACTGGGTTTACGTCTTAGCGTACTTAAAAACCATAGCAACATTGCTATGGa > 2:3580856/1‑100 (MQ=255) gCCTTCGTTATACGCAGGTATAATGGCGTCAATACAGCCTTTCTTTTGACTGGGTTTACGTCTTAGCGTACTTAAAAACCATAGCAATGTTGCTATggtt < 1:3127982/100‑3 (MQ=255) gCCTTCGTTATACGCAGGTATAATGGCGTCAATACAGCCTTTCTTTTGACTGGGTTTACGTCTTAGCGTACTTAAAAACCATAGCAACATTGCTATGGAc < 2:1091980/100‑1 (MQ=255) ccTTCGTTATACGCAGGTATAATGGCGTCAATACAGCCTTTCTTTTGACTGGGTTTACGTCTTAGCGTACTTAAAAACCATAGCAACATTGCTATGGACa < 2:2910090/100‑1 (MQ=255) ccTTCGTTATACGCAGGTATAATGGCGTCAATACAGCCTTTCTTTTGACTGGGTTTACGTCTTAGCGTACTTAAAAACCATAGCAACATTGCTATGGACa > 1:1806178/1‑100 (MQ=255) ccTTCGTTATACGCAGGTATAATGGCGTCAATACAGCCTTTCTTTTGACTGGGTTTACGTCTTAGCGTACTTAAAAACCATAGCAACATTGCTATGGACa < 1:2972229/100‑1 (MQ=255) cTTCGTTATACGCAGGTATAATGGCGTCAATACAGCCTTTCTTTTGACTGGGTTTACGTCTTAGCGTACTTAAAAACCATAGCAATGTTGCTATggtttt < 2:2842917/100‑5 (MQ=255) tCGTTATACGCAGGTATAATGGCGTCAATACAGCCTTTCTTTTGACTGGGTTTACGTCTTAGCGTACTTAAAAACCATAGCAATGTTGCTATggttttta < 1:2782628/100‑7 (MQ=39) tCGTTATACGCAGGTATAATGGCGTCAATACAGCCTTTCTTTTGACTGGGTTTACGTCTTAGCGTACTTAAAAACCATAGCAATGTTGCTATggttttt < 1:2358598/99‑6 (MQ=39) tCGTTATACGCAGGTATAATGGCGTCAATACAGCCTTTCTTTTGACTGGGTTTACGTCTTAGCGTACTTAAAAACCATAGCAACATTGCTATGGACTTAc > 1:2596938/1‑100 (MQ=255) gTTATACGCAGGTATAATGGCGTCAATACAGCCTTTCTTTTGACTGGGTTTACGTCTTAGCGTACTTAAAAACCATAGCAACATTGCTATGGACATACAg > 1:1071399/1‑100 (MQ=255) ttATACGCAGGTATAATGGCGTCAATACAGCCTTTCTTTTGACTGGGTTTACGTCTTAGCGTACTTAAAAACCATAGCAATGTTGCTATggtttttaagt < 1:781213/100‑10 (MQ=38) ataCGCAGGTATAATGGCGTCAATACAGCCTTTCTTTTGACTGGGTTTACGTCTTAGCGTACTTAAAAACCATAGCAACATTGCTATGGACATACAGATa > 1:739954/1‑100 (MQ=255) ataCGCAGGTATAATGGCGTCAATACAGCCTTTCGTTTGACTGGGTTTACGTCTTAGCGTACTTAAAAACCATAGCAACATTGCTATGGACATACAGATa < 2:3155328/100‑1 (MQ=255) taCGCAGGTATAATGGCGTCAATACAGCCTTTCTTTTGACTGGGTTTACGTCTTAGCGTACTTAAAAACCATAGCAACATTGCTATGGACATACAGATaa > 2:3029255/1‑100 (MQ=255) taCGCAGGTATAATAGAGTCAATACACCCTTTCTTTATACTGGGTTGACGTCTTAGCGCACTTAAAAACCATAGGAACATTGCTATGGACATTCAGATaa > 2:2222526/1‑100 (MQ=255) cGCAGGTATAATGGCGTCAATACAGCCTTTCTTTTGACTGGGTTTACGTCTTAGCGTACTTAAAAACCATAGCAACATTGCTATGGACATACAGATAAat > 2:1094148/1‑100 (MQ=255) gCAGGTATAATGGCGTCAATACAGCCTTTCTTTTGACTGGGTTTACGTCTTAGCGTACTTAAAAACCATAGCAACATTGCTATGGACATACAGATAAata < 1:3376330/100‑1 (MQ=255) ggTATAATGGCGTCAATACAGCCTTTCTTTTGACTGGGTTTACGTCTTAGCGTACTTAAAAACCATAGCAACATTGCTATGGACATACAGATAAATATcc > 1:101231/1‑100 (MQ=255) ggCGTCAATACAGCCTTTCTTTTGACTGGGTTTACGTCTTAGCGTACTTAAAAACCATAGCAACATTGCTATGGACATACAGATAAATATCCAGGTTTTc > 2:609308/1‑100 (MQ=255) cGTCAATACAGCCTTTCTTTTGACTGGGTTTACGTCTTAGCGTACTTAAAAACCATAGCAACATTGCTATGGACATACAGATAAATATCCAGGTTTTCAt < 2:336101/100‑1 (MQ=255) cGTCAATACAGCCTTTCTTTTGACTGGGTTTACGTCTTAGCGTACTTAAAAACCATAGCAACATTGCTATGGACATACAGATAAATATCCAGGTTTTCAt > 1:3524068/1‑100 (MQ=255) gTCAATACAGCCTTTCTTTTGACTGGGTTTACGTCTTAGCGTACTTAAAAACCATAGCAACATTGCTATGGACATACAGATAAATATCCAGGTTTTCATg < 1:3062952/100‑1 (MQ=255) gTCAATACAGCCTTTCTTTTGACTGGGTTTACGTCTTAGCGTACTTAAAAACCATAGCAACATTGCTATGGACATACAGATAAATATCCAGGTTTTCATg > 1:2210703/1‑100 (MQ=255) tACAGCCTTTCTTTTGACTGGGTTTACGTCTTAGCGTACTTAAAAACCATAGCAACATTGCTATGGACATACAGATAAATATCCAGGTTTTCATGCAAtt > 1:1309417/1‑100 (MQ=255) naCAGCCTTTCTTTTGAATGAGTTTACGGCTTAGCGTCCTTAACTACCTTAGCAACCTTGCTATGCGCCTACAGCTCACTATTCTGACTTTCATGCagt > 2:2445547/2‑97 (MQ=255) aCAGCCTTTCTTTTGACTGGGTTTACGTCTTAGCGTACTTAAAAACCATAGCAACATTGCTATGGACATACAGATAAATATCCAGGTTTTCATGCAAttt > 1:2618868/1‑100 (MQ=255) cAGCCTTTCTTTTGACTGGGTTTACGTCTTAGCGTACTTAAAAACCATAGCAACATTGCTATGGACATACAGATAAATATCCAGGTTTTCATGCAATTTg > 1:2991332/1‑100 (MQ=255) gCCTTTCTTTTGACTGGGTTTACGTCTTAGCGTACTTAAAAACCATAGCAACATTGCTATGGACATACAGATAAATATCCAGGTTTTCATGCAATTTg > 1:2612853/1‑98 (MQ=255) gCCTTTCTTTTGACTGGGTTTACGTCTTAGCGTACTTAAAAACCATAGCAACATTGCTATGGACATACAGATAAATATCCAGGTTTTCATGCAATTTGCt > 2:2254164/1‑100 (MQ=255) ccTTTCTTTTGACTGGGTTTACGTCTTAGCGTACTTAAAAACCATAGCAACATTGCTATGGACATACAGATAAATATCCAGGTTTTCATGCAATTTGCTc < 1:1718462/100‑1 (MQ=255) tttctttTGACTGGGTTTACGTCTTAGCGTACTTAAAAACCATAGCAACATTGCTATGGACATACAGATAAATATCCAGGTTTTCATGCAATTTGCTCaa > 2:315431/1‑100 (MQ=255) tttctttTGACTGGGTTTACGTCTTAGCGTACTTAAAAACCATAGCAACATTGCTATGGACATACAGATAAATATCCAGGTTTTCATGCAATTTGCTCaa > 1:793330/1‑100 (MQ=255) ttctttTGACTGGGTATACGTCTTAGCGTACTTAAAAACCATAGCACCATTGCTATGGACATACAGATAAATATCCAGGTTTTCATGCAATTTGCTCaaa < 1:1744622/100‑1 (MQ=255) tctttTGACTGGGTTTACGTCTTAGCGTACTTAAAAACCATAGCAACATTGCTATGGACATACAGATAAATATCCAGGTTTTCATGCAATTTGCTCAAAg < 2:3353881/100‑1 (MQ=255) tctttTGACTGGGTTTACGTCTTAGCGTACTTAAAAACCATAGCAACATTGCTATGGACATACAGATAAATATCCAGGTTTTCATGCAATTTGCTCAAAg < 1:2543685/100‑1 (MQ=255) ttttGACTGGGTTTACGTCTTAGCGTACTTAAAAACCATAGCAACATTGCTATGGACATACAGATAAATATCCAGGTTTTCATGCAATTTGCTCAAAGaa > 1:2339533/1‑100 (MQ=255) ttttGACTGGGTTTACGTCTTAGCGTACTTAAAAACCATAGCAACATTGCTATGGACATACAGATAAATATCCAGGTTTTCATGCAATTTGCTCAAAGaa > 2:1298452/1‑100 (MQ=255) tttGACTGGGTTTACGTCTTAGCGTACTTAAAAACCATAGCAACATTGCTATGGACATACAGATAAATATCCAGGTTTTCATGCAATTTGCTCAAAGa < 2:2319750/98‑1 (MQ=255) tttGACTGGGTTTACGTCTTAGCGTACTTAAAAACCATAGCAACATTGCTATGGACATACAGATAAATATCCAGGTTTTCATGCAATTTGCTCAAAGAAt > 1:617846/1‑100 (MQ=255) gACTGGGTGTACGGCGTAGCGTACTTAAAATCCATAGCAGCATTGCTACGGACATACAGATAAATATCCAGGTTTTCATGCAATTTGCTCAAAGa < 2:3022149/95‑1 (MQ=255) gggTTTACGTCTTAGCGTACTTAAAAACCATAGCAACATTGCTATGGACATACAGATAAATATCCAGGTTTTCATGCAATTTGCTCAAAGAATCATTTTa > 2:3284207/1‑100 (MQ=255) gggTTTACGTCTTAGCGTACTTAAAAACCATAGCAACATTGCTATGGACATACAGATAAATATCCAGGTTTTCATGCAATTTGCTCAAAGAATCATTTTa < 1:1795831/100‑1 (MQ=255) gggTTTACGTCTTAGCGTACTTAAAAACCATAGCAACATTGCTATGGACATACAGATAAATATCCAGGTTTTCATGCAATTTGCTCAAAGAATCATTTTa < 1:2451730/100‑1 (MQ=255) ggTTTACGTCTTAGCGTACTTAAAAACCATAGCAACATTGCTATGGACATACAGATAAATATCCAGGTTTTCATGCAATTTGCTCAAAGAATCATCTTa > 2:821076/1‑99 (MQ=255) gTTTACGTCTTAGCGTACTTAAAAACCATAGCAACATTGCTATGGACATACAGATAAATATCCAGGTTTTCATGCAATTTGCTCAAAGAATCATTTTATg < 2:965754/100‑1 (MQ=255) gTTTACGTCTTAGCGTACTTAAAAACCATAGCAACATTGCTATGGACATACAGATAAATATCCAGGTTTTCATGCAATTTGCTCAAAGAATCATTTTATg < 1:1238826/100‑1 (MQ=255) gTTTACGTCTTAGCGTACTTAAAAACCATAGCAACATTGCTATGGACATACAGATAAATATCCAGGTTTTCATGCAATTTGCTCAAAGAATCATTTTATg < 2:467851/100‑1 (MQ=255) gTTTACGTCTTAGCGTACTTAAAAACCATAGCAACATTGCTATGGACATACAGATAAATATCCAGGTTTTCATGCAATTTGCTCAAAGAATCATTTTATg < 1:583344/100‑1 (MQ=255) tttACGTCTTAGCGTACTTAAAAACCATAGCAACATTGCTATGGACATACAGATAAATATCCAGGTTTTCATGCAATTTGCTCAAAGAATCATTTTATGa > 1:57448/1‑100 (MQ=255) tttACGTCTTAGCGTACTTAAAAACCATAGCAACATTGCTATGGACATACAGATAAATATCCAGGTTTTCATGCAATTTGCTCAAAGAATCATTTTATGa < 1:745842/100‑1 (MQ=255) tACGTCTTAGCGTACTTAAAAACCATAGCAACATTGCTATGGACATACAGATAAATATCCAGGTTTTCATGCAATTTGCTCAAAGAATCATTTTATGAAt < 2:252819/100‑1 (MQ=255) tACGTCTTAGCGTACTTAAAAACCATAGCAACATTGCTATGGACATACAGATAAATATCCAGGTTTTCATGCAATTTGCTCAAAGAATCATTTTATGAAt > 2:2085171/1‑100 (MQ=255) aCGTCTTAGCGTACTTAAAAACCATAGCAACATTGCTATGGACATACAGATAAATATCCAGGTTTTCATGCAATTTGCTCAAAGAATCATTTTATGAAtt < 1:802804/100‑1 (MQ=255) tCTTAGCGTACTTAAAAACCATAGCAACATTGCTATGGACATACAGATAAATATCCAGGTTTTCATGCAATTTGCTCAAAGAATCATTTTATGAATTACa > 1:901452/1‑100 (MQ=255) tACTTAAACACCATAGCAACATTGCTATGGACATCCCGATAAATATCCAGGTTTTCATGCAATTTGCTCAAAAAATCATTTTATGAATTACAAAGCCTTc > 2:160129/1‑100 (MQ=255) tACTTAAAAACCATAGCATCATTGCTATGTACATACAGATAAATATCCAGGTTTTCATGAAATTTGCTCAAAGAATCATTTTATGAATTACAATGCCttt < 2:311072/100‑2 (MQ=255) aCTTAAAAACCATAGCAACATTGCTATGGACATACAGATAAATATCCAGGTTTTCATGCAATTTGCTCAAAGAATCATTTTATGAATTACAAAGCCTTCa > 2:2452939/1‑100 (MQ=255) ctgtatgtccATAGCAATGTTGCTATGGACATACAGATAAATATCCAGGTTTTCATGCAATTTGCTCAAAGAATCATTTTATGAATTACAAAGCCTTCAc > 1:1447762/9‑100 (MQ=38) cTTAAAAACCATAGCAACATTGCTATGGACATACAGATAAATATCCAGGTTTTCATGCCATTTGCTCAAAGAATCATTTTATGAACTACAAAGCCTTCAc > 2:747831/1‑100 (MQ=255) cTTAAAAACCATAGCAACATTGCTATGGACATACAGATAAATATCCAGGTTTTCATGCAATTTGCTCAAAGAATCATTTTATGAATTACAAAGCCTTCAc > 2:1562369/1‑100 (MQ=255) cTTAAAAACCATAGCAACATTGCTATGGACATACAGATAAATATCCAGGTTTTCATGCAATTTGCTCAAAGAATCATTTTATGAATTACAAAGCCTTCAc > 2:1679876/1‑100 (MQ=255) cTTAAAAACCATAGCAACATTGCTATGGACATACAGATAAATATCCAGGTTTTCATGCAATTTGCTCAAAGAATCATTTTATGAATTACAAAGCCTTCAc > 1:1244509/1‑100 (MQ=255) cTTAAAAACCATAGCAACATTGCTATGGACATACAGATAAATATCCAGGTTTTCATGCAATTTGCTCAAAGAATCATTTTATGAATTACAAAGCCTTCAc > 2:3742018/1‑100 (MQ=255) cTTAAAAACCATAGCAACATTGCTATGGACATACAGATAAATATCCAGGTTTTCATGCAATTTGCTCAAAGAATCATTTTATGAATTACAAAGCCTTCAc > 1:1473915/1‑100 (MQ=255) cTTAAAAACCATAGCAACATTGCTATGGACATACAGATAAATATCCAGGTTTTCATGCAATTTGCTCAAAGAATCATTTTATGAATTACAAAGCCTTCAc > 1:1963834/1‑100 (MQ=255) cTTAAAAACCATAGCAACATTGCTAGGTACATCCAGAAAAATATACAAATTTTCTTGAAATTTGCTCAAAGAATCATTTTATGAATTACAAATCATTCa > 2:1894269/1‑99 (MQ=255) tgtatgtccATAGCAATGTTGCTATGGACATACAGATAAATATCCAGGTTTTCATACAATTTGACCAAAGCAACATTTTATGCATTACAAAGCCTTCAcc > 2:2297860/8‑100 (MQ=25) tAAAAACCATAGCAACATTGCTATGGACATACAGATAAATATCCAGGTTTTCATGCAATTTGCTCAAAGAATCATTTTATGAATTACAAAGCCTTCAccc > 1:845602/1‑100 (MQ=255) aaaaaCCATAGCAACATTGCTATGGACATACAGATAAATATCCAGGTTTTCATGCAATTTGCTCAAAGAATCATTTTATGAATTACAAAGCCTTCACCCa < 1:3452797/100‑1 (MQ=255) aaaaCCATAGCAACATTGCTATGGACATACAGATAAATATCCAGGTTTTCATGCAATTTGCTCAAAGAATCATTTTATGAATTACAAAGCCTTCACCCAg > 1:2543283/1‑100 (MQ=255) aaaaCCATAGCAACATTGCTATGGACATACAGATAAATATCCAGGTTTTCATGCAATTTGCTCAAAGAATCATTTTATGAATTACAAAGCCTTCACCCAg > 1:2537124/1‑100 (MQ=255) tgtccATAGCAATGTTGCTATGGACATACAGATAAATATCCAGGTTTTCATGCAATTTGCTCAAAGAATCATTTTATGAATTACAAAGCCTTCACCCAGa > 2:8710/4‑100 (MQ=255) tgtccATAGCAATGTTGCTATGGACATACAGATAAATATCCAGGTTTTCATGCAATTTGCTCAAAGAATCATTTTATGAATTACAAAGCCTTCACCCAGa > 1:3509233/4‑100 (MQ=255) tgtccATAGCAATGTTGCTATGGACATACAGATAAATATCCAGGTTTTCATGCAATTTGCTCAAAGAATCATTTTATGAATTACAAAGCCTTCACCCAGa > 2:2756512/4‑100 (MQ=255) tgtacATAGCAATGTTGCTATGGACATACAGATAAATATCCAGGTTTTCATGCAATTTGATCAAAGAATCATTTTATGAATTACAAAGCCTTCACCCAg > 2:3631150/5‑99 (MQ=255) gtccATAGCAATGTTGCTATGGACATACAGATAAATATCCAGGTTTTCATGCAATTTGCTCAAAGAATCATTTTATGAATTACAAAGCCTTCACCCAGAt > 1:1678680/3‑100 (MQ=255) gtccATAGCAATGTTGCTATGGACATACAGATAAATATCCAGGTTTTCATGCAATTTGCTCAAAGAATCATTTTATGAATTACAAAGCCTTCACCCAGAt > 2:2713010/3‑100 (MQ=255) tccATAGCAATGTTGCTATGGACATACAGATAAATATCCAGGTTTTCATGCAATTTGCTCAAAGAATCATTTTATGAATTACAAAGCCTTCACCCAGATc > 1:3598071/2‑100 (MQ=255) tccATAGCAATGTTGCTATGGACATACAGATAAATATCCAGGTTTTCATGCAATTTGATCAAAGAATCATTTTATGAATTACAAAGCCTTCACCCAGATc > 2:1319271/2‑100 (MQ=255) ccATAGCAATGTTGCTATGGACATACAGATAAATATCCAGGTTTTCATGCAATTTGCTCAAAGAATCATTTTATGAATTACAAAGCCTTCACCCAGATCg > 1:1327463/1‑100 (MQ=255) cATAGCAACATTGCTATGGACATACAGATAAATATCCAGGTTTTCATGCAATTTGCTCAAAGAATCATTTTATGAATTACAAAGCCTTCACCCAGATCGc < 1:598641/100‑1 (MQ=255) cATAGCAACATTGCTATGGACATACAGATAAATATCCAGGTTTTCATGCAATTTGCTCAAAGAATCATTTTATGAATTACAAAGCCTTCACCCAGATCGc < 2:1692981/100‑1 (MQ=255) cATAGCAACATTGCTATGGACATACAGATAAATATCCAGGTTTTCATGCAATTTGCTCAAAGAATCATTTTATGAATTACAAAGCCTTCACCCAGATCGc < 1:2074540/100‑1 (MQ=255) cATAGCAACATTGCTATGGACATACAGATAAATATCCAGGTTTTCATGCAATTTGCTCAAAGAATCATTTTATGAATTACAAAGCCTTCACCCAGATCGc > 1:3465891/1‑100 (MQ=255) aTAGCAACATTGCTATGGACATACAGATAAATATCCAGGTTTTCATGCAATTTGCTCAAAGAATCATTTTATGAATTACAAAGCCTTCACCCAGATCGCt > 2:328090/1‑100 (MQ=255) tAGCAACATTGCTATGGACATACAGATAAATATCCAGGTTTTCATGCAATTTGCTCAAAGAATCATTTTATGAATTACAAAGCCTTCACCCAGATCGCTa < 2:1748765/100‑1 (MQ=255) tAGCAACATTGCTATGGACATACAGATAAATATCCAGGTTTTCATGCAATTTGCTCAAAGAATCATTTTATGAATTACAAAGCCTTCACCCAGATCGCTa < 1:1990263/100‑1 (MQ=255) cATTGCTATGGACATACAGATAAATATCCAGGTTTTCATGCAATTTGCTCAAAGAATCATTTTATGAATTACAAAGCCTTCACCCAGATCGCTATTGAcc < 1:2832948/100‑1 (MQ=255) cATTGCTATGGACATACAGATAAATATCCAGGTTTTCATGCAATTTGCTCAAAGAATCATTTTATGAATTACAAAGCCTTCACCCAGATCGCTATTGAcc > 2:2889235/1‑100 (MQ=255) | CAGACACGGGCCTTCGTTATACGCAGGTATAATGGCGTCAATACAGCCTTTCTTTTGACTGGGTTTACGTCTTAGCGTACTTAAAAACCATAGCAACATTGCTATGGACATACAGATAAATATCCAGGTTTTCATGCAATTTGCTCAAAGAATCATTTTATGAATTACAAAGCCTTCACCCAGATCGCTATTGACC > NC_000913/383801‑383996 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |