Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,976,311 (A)8→7 intergenic (‑297/‑288) aas ← / → galR fused 2‑acylglycerophospho‑ethanolamine acyl transferase/acyl‑acyl carrier protein synthetase/galactose‑inducible d‑galactose regulon transcriptional repressor; autorepressor

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,976,3040A.98.6% 617.0 / 1.1 138intergenic (‑290/‑295)aas/galRfused 2‑acylglycerophospho‑ethanolamine acyl transferase/acyl‑acyl carrier protein synthetase/galactose‑inducible d‑galactose regulon transcriptional repressor; autorepressor
Reads supporting (aligned to +/- strand):  ref base A (1/1);  new base . (56/80);  total (57/81)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.47e-01

Only 100 of 152 total aligned reads displayed.

TGCACGACGACTCTTCGCCAGCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGCAAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAGC  >  NC_000913/2976205‑2976399
                                                                                                   |                                                                                               
tGCACGACGACTCTTCGCCAGCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGCa                                                                                                 >  1:2567430/1‑100 (MQ=255)
tGCACGACGACTCTTCGCCAGCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGCa                                                                                                 >  2:716363/1‑100 (MQ=255)
    cgacgaCTCTTCGCCAGCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGATACTGTTACAGATTGCTGACCGGCaaaaa                                                                                             >  1:1919402/1‑100 (MQ=255)
        gacTCTTCGCCAGCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTATATTGTCGGTTTCTGTTACAGATTGATGATCGGCaaaaaaacc                                                                                         <  2:1955750/100‑3 (MQ=255)
        gacTCTTCGCCAGCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGCaaaaaaacc                                                                                         >  2:1200438/1‑98 (MQ=255)
          ctctTCGCCAGCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGCaaaaaaacctg                                                                                       <  1:2006460/100‑5 (MQ=255)
          ctctTCGCCAGCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGCaaaaaaacctg                                                                                       >  2:1447701/1‑96 (MQ=255)
          ctctTCGCCAGCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGCaaaaaaacctg                                                                                       >  1:479050/1‑96 (MQ=255)
            ctTCGCCAGCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTgcg                                                                                    >  1:47368/1‑100 (MQ=255)
              tCGCCAGCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCa                                                                                  <  2:174477/100‑1 (MQ=255)
               cGCCAGCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGGTGAGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCAt                                                                                 >  1:1613862/1‑100 (MQ=255)
                gCCAGCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATc                                                                                >  1:1231525/1‑100 (MQ=255)
                gCCAGCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATc                                                                                <  1:1950293/100‑1 (MQ=255)
                 ccAGCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCt                                                                               >  1:2577870/1‑100 (MQ=255)
                  cAGCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATc                                                                                <  1:2837854/98‑1 (MQ=255)
                    gCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTgcg                                                                            >  1:2417344/1‑100 (MQ=255)
                       agaAAACGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAg                                                                         >  2:700653/1‑100 (MQ=255)
                         aaaaCGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCAGATGCGCAggt                                                                       <  2:450034/100‑2 (MQ=255)
                          aaaCGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCt                                                                      <  2:441380/100‑1 (MQ=255)
                          aaaCGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCAGATGCGCAggtt                                                                      <  1:2132449/100‑3 (MQ=255)
                          aaaCGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCAGATGCGCAggtt                                                                      <  2:359830/100‑3 (MQ=255)
                            aCGCAAAGGAATGAAGGGAAATGCAACGATGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTgg                                                                    <  1:1745086/100‑1 (MQ=255)
                            aCGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTgg                                                                    <  1:2711724/100‑1 (MQ=255)
                            aCGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTgg                                                                    >  2:1006667/1‑100 (MQ=255)
                            aCGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCAGATGCGCAggtttt                                                                    <  1:1187322/100‑5 (MQ=255)
                             cGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCAGATGCGCAggttttt                                                                   <  2:2747814/100‑6 (MQ=255)
                             cGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCAGATGCGCAggttttt                                                                   <  1:2161754/100‑6 (MQ=255)
                              gCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGgtg                                                                  >  2:102804/1‑100 (MQ=255)
                              gCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCAGATGCGCAggtttttt                                                                  <  1:1508534/100‑7 (MQ=255)
                              ctaaaGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGgtg                                                                  <  1:1109767/98‑1 (MQ=255)
                                aaaGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGgtgag                                                                >  2:1109785/1‑98 (MQ=255)
                                aaaGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTa                                                                >  2:1331183/1‑100 (MQ=255)
                                 aaGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCAGATGCGCAggtttttttgc                                                               <  2:559605/100‑10 (MQ=255)
                                    gAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTc                                                            <  1:317797/100‑1 (MQ=255)
                                    gAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACAGTTACAGATTGATGACCGGCAAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAAtt                                                             >  2:586252/1‑100 (MQ=255)
                                     aaTGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCa                                                           <  2:2530939/100‑1 (MQ=255)
                                      aTGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCAt                                                          >  1:2672672/1‑100 (MQ=255)
                                      aTGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCAt                                                          <  2:394545/100‑1 (MQ=255)
                                      aTGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCAt                                                          >  2:13831/1‑100 (MQ=255)
                                       tGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCAtg                                                         <  2:2094085/100‑1 (MQ=255)
                                       tGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCAtg                                                         <  2:2269194/100‑1 (MQ=255)
                                       tGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCAtg                                                         >  2:1526293/1‑100 (MQ=255)
                                         aaGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCAtgtg                                                       <  2:2348081/100‑1 (MQ=255)
                                               aaTGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAAc                                                 <  1:1169137/100‑1 (MQ=255)
                                                aTGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAAcc                                                <  1:2284026/100‑1 (MQ=255)
                                                  gCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCg                                              >  1:979459/1‑100 (MQ=255)
                                                  gCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCg                                              >  1:2004673/1‑100 (MQ=255)
                                                     aCGAGGGGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAg                                           <  2:511366/100‑1 (MQ=255)
                                                      cGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGt                                          <  2:989277/100‑1 (MQ=255)
                                                       gAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGtt                                         >  2:2373106/1‑100 (MQ=255)
                                                           tgtgtAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACt                                     >  2:1580042/1‑100 (MQ=255)
                                                            gtgtAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACtt                                    >  2:930148/1‑100 (MQ=255)
                                                            gtgtAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACtt                                    >  1:503969/1‑100 (MQ=255)
                                                            gtgtAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACtt                                    >  1:2030906/1‑100 (MQ=255)
                                                            gtgtAAATTGTCAGTTACTGTTACAGAGTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACtt                                    <  1:1236969/100‑1 (MQ=255)
                                                             tgtAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGAGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTc                                   >  1:2391201/1‑100 (MQ=255)
                                                              gtAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCa                                  <  2:1231543/100‑1 (MQ=255)
                                                              gtAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCa                                  >  1:1804847/1‑100 (MQ=255)
                                                              gtAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCa                                  <  2:612865/100‑1 (MQ=255)
                                                              gtAAAGTGTCTGTTACTGTTACAGATTGATGGCCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGCGTTATTCATGTGCTCAACCCGAAGTTGACTTCa                                  <  1:1905854/100‑1 (MQ=255)
                                                                aaaTTGTCGGTTACTGTTACAGATTGATGACTGGC‑AACAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCAcc                                <  1:1951790/100‑1 (MQ=255)
                                                                aaaTTGTCGGTTACTGTTACAGATTGATGACCGGC‑AATAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCAcc                                >  1:1563365/1‑100 (MQ=255)
                                                                aaaTTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCAcc                                <  2:2522138/100‑1 (MQ=255)
                                                                aaaTTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCAcc                                <  1:1428536/100‑1 (MQ=255)
                                                                aaaTTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCAcc                                <  2:1936797/100‑1 (MQ=255)
                                                                 aaTTGTCGGTTACAGTTACAGATTGATGACCGGCAAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCAcc                                <  1:586246/100‑1 (MQ=255)
                                                                  nttGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGCGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTa                              >  1:1424160/2‑100 (MQ=255)
                                                                  aTTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTa                              >  2:2063393/1‑100 (MQ=255)
                                                                  aTTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTa                              <  2:1550042/100‑1 (MQ=255)
                                                                    tGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATc                            <  2:2883739/100‑1 (MQ=255)
                                                                    tGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATc                            >  1:350237/1‑100 (MQ=255)
                                                                    tGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATc                            <  2:479055/100‑1 (MQ=255)
                                                                       cGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAAt                         <  2:1919429/100‑1 (MQ=255)
                                                                          ttACTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATAcc                      <  2:493652/100‑1 (MQ=255)
                                                                            aCTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACctc                    >  2:2602149/1‑100 (MQ=255)
                                                                             cTGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACctct                   >  2:1658900/1‑100 (MQ=255)
                                                                              tGTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTg                  <  1:1447680/100‑1 (MQ=255)
                                                                               gTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTgg                 <  1:102802/100‑1 (MQ=255)
                                                                               gTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTgg                 >  2:38559/1‑100 (MQ=255)
                                                                               gTTACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTgg                 >  2:1549794/1‑100 (MQ=255)
                                                                                ttACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTggg                >  2:1569185/1‑100 (MQ=255)
                                                                                 tACAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGa               >  2:459397/1‑100 (MQ=255)
                                                                                   cAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATc             >  2:2865211/1‑100 (MQ=255)
                                                                                   cAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATc             <  1:812759/100‑1 (MQ=255)
                                                                                   cAGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATc             <  1:1655834/100‑1 (MQ=255)
                                                                                    aaaTTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATca            <  1:926935/98‑1 (MQ=255)
                                                                                    aGATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATca            >  2:1175932/1‑100 (MQ=255)
                                                                                     gatggatgACCGGC‑AAAAAAGCCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATcac           <  1:2833333/100‑1 (MQ=255)
                                                                                     gATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATcac           <  2:2192219/100‑1 (MQ=255)
                                                                                     gATTGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATcac           >  2:1208924/1‑100 (MQ=255)
                                                                                       ttGATGACCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATcacca         >  2:1614173/1‑100 (MQ=255)
                                                                                         gatgaCCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATcaccac        >  1:1664444/1‑99 (MQ=255)
                                                                                           tgaCCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACttt     >  2:978928/1‑100 (MQ=255)
                                                                                             aCCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAg   <  2:350241/100‑1 (MQ=255)
                                                                                             aCCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAg   <  2:663673/100‑1 (MQ=255)
                                                                                             aCCGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAg   <  1:978919/100‑1 (MQ=255)
                                                                                              ccGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAGc  >  1:1641334/1‑100 (MQ=255)
                                                                                              ccGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAGc  >  2:2469979/1‑100 (MQ=255)
                                                                                              ccGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAGc  >  1:2305604/1‑100 (MQ=255)
                                                                                              ccGGC‑AAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAAATCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAGc  >  1:1851031/1‑100 (MQ=255)
                                                                                                   |                                                                                               
TGCACGACGACTCTTCGCCAGCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGCAAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAGC  >  NC_000913/2976205‑2976399

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑