| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,648,144 | (T)7→6 | intergenic (‑356/‑384) | dinQ ← / → arsR | UV‑inducible membrane toxin, DinQ‑AgrB type I toxin‑antitoxin system/arsenical resistance operon transcriptional repressor; autorepressor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,648,138 | 0 | T | . | 99.0% | 464.2 / ‑2.5 | 104 | intergenic (‑350/‑390) | dinQ/arsR | UV‑inducible membrane toxin, DinQ‑AgrB type I toxin‑antitoxin system/arsenical resistance operon transcriptional repressor; autorepressor |
| Reads supporting (aligned to +/- strand): ref base T (1/0); new base . (60/43); total (61/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.45e-01 | |||||||||||
Only 100 of 118 total aligned reads displayed.
CAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCG‑ACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGCTCCCTCC > NC_000913/3648039‑3648233 | aGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCG‑ACGCAAAGTCGGtt > 1:207777/1‑100 (MQ=255) aGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCG‑ACGCAAAGTCGGtt < 2:2224132/100‑1 (MQ=255) gTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCG‑ACGCAAAGTCGGttt > 2:1082047/1‑100 (MQ=255) tGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCG‑ACGCAAAGTCGGtttttt < 2:2230893/100‑1 (MQ=255) tGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCG‑ACGCAAAGTCGGtttttt < 1:2740365/100‑1 (MQ=255) tGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCG‑ACGCAAAGTCGGtttttt > 2:2753463/1‑100 (MQ=255) ctgTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCG‑ACGCAAAGTCGGtttttt < 2:309867/98‑1 (MQ=255) ggTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCG‑ACGCAAAGTCGGtttttta < 2:858670/100‑2 (MQ=255) gTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCG‑ACGCAAAGTCGGttttttag > 1:309863/1‑98 (MQ=255) gTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCG‑ACGCAAAGTCGGttttttac > 2:2068286/1‑98 (MQ=255) tATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCG‑ACGCAAAGTCGGttttttaca < 1:158012/100‑4 (MQ=255) aGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCG‑ACGCAAAGTCGG‑TTTTTTACATCCg > 1:636808/1‑100 (MQ=255) gCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCG‑ACGCAAAGTCGG‑TTTTTTACATCCgg > 2:2337683/1‑100 (MQ=255) cATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCG‑ACGCAAAGTCGG‑TTTTTTACATCCGGa > 1:2656292/1‑100 (MQ=255) cATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCG‑ACGCAAACTCGG‑TTTTTTACATCCGGa > 1:1731021/1‑100 (MQ=255) tGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCG‑ACGCAAAGTCGG‑TTTTTTACATCCGGATTc > 1:354671/1‑100 (MQ=255) tGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCG‑ACGCAAAGTCGG‑TTTTTTACATCCGGATTc < 2:2719830/100‑1 (MQ=255) gATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGCACCCAAAGCCGG‑TTTTTTACATCCGGAtt > 1:2010179/1‑99 (MQ=18) tGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCG‑ACGCAAAGTCGG‑TTTTTTACATCCGGATTCgg > 2:1497035/1‑99 (MQ=255) tGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCG‑ACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGa > 1:2310410/1‑100 (MQ=255) ttAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCG‑ACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAg < 1:2711599/100‑1 (MQ=255) tAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCG‑ACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAgg < 2:2552582/100‑1 (MQ=255) aGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCG‑ACGCAAAGTCGG‑TTTTTTACATCCGGATTTGGACAAGGc > 2:930179/1‑100 (MQ=255) aGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCG‑ACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGc > 2:1595957/1‑100 (MQ=255) aGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCG‑ACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGc < 2:2099166/100‑1 (MQ=255) atcttgGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCG‑ACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCtt < 1:761684/96‑1 (MQ=255) tgatgGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCG‑ACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTa > 1:1125443/1‑100 (MQ=255) atgGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCG‑ACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAat > 1:2570804/1‑100 (MQ=255) atgGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCG‑ACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAat < 2:666939/100‑1 (MQ=255) ggCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCG‑ACGCAAAGTCGG‑TTTTTTACATCCGGATTCAGACAAGGCTTAatat > 2:2855788/1‑100 (MQ=255) gCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCG‑ACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATg < 1:2369798/100‑1 (MQ=255) cTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCG‑ACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGa < 2:2622465/100‑1 (MQ=255) tATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCG‑ACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGAc > 2:523365/1‑100 (MQ=255) tATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCG‑ACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGAc < 1:2179470/100‑1 (MQ=255) aTCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCG‑ACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACg > 2:1213778/1‑100 (MQ=255) aTCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCG‑ACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACg < 1:1948492/100‑1 (MQ=255) tctcACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCG‑ACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGa > 1:2356110/1‑100 (MQ=255) tctcACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCG‑ACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGa < 2:636814/100‑1 (MQ=255) tcACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCG‑ACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATg > 1:589846/1‑100 (MQ=255) cACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCG‑ACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGa > 2:90422/1‑100 (MQ=255) aCTCCAGTCATAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCG‑ACGCAAAGTCTG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGAt < 1:497245/97‑1 (MQ=21) aCTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCG‑ACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGAc > 1:2463311/1‑100 (MQ=255) tCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCG‑ACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGAccc < 2:2726830/100‑1 (MQ=255) ccAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCG‑ACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGAccc < 2:1164071/99‑1 (MQ=255) ccAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCG‑ACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGAccc > 2:2374356/1‑99 (MQ=255) aGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCG‑ACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGt < 2:754089/100‑1 (MQ=255) tCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCG‑ACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGa > 1:2697393/1‑100 (MQ=255) cAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCG‑ACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGaa > 1:1663970/1‑100 (MQ=255) agagCCACCAACTCAGGGCTGGAAAGTAAAAAACCG‑ACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGaaa > 1:1377666/1‑100 (MQ=255) gagCCACCAACTCAGGGCTGGAAAGTAAAAAACCG‑ACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAg < 2:541743/100‑1 (MQ=255) gagCCACCAACTCAGGGCTGGAAAGTAAAAAACCG‑ACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAg < 2:2637317/100‑1 (MQ=255) gagCCACCAACTCAGGGCTGGAAAGTAAAAAACCG‑ACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAg < 1:1841954/100‑1 (MQ=255) gCCACCAACTCAGGGCTGGAAAGTAAAAAACCG‑ACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGta < 1:1788064/100‑1 (MQ=255) gCCACCAACTCAGGGCTGGAAAGTAAAAAACCG‑ACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGta < 1:1217932/100‑1 (MQ=255) gCCACCAACTCAGGGCTGGAAAGTAAAAAACCG‑ACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGta > 2:914663/1‑100 (MQ=255) gCCACCAACTCAGGGCTGGAAAGTAAAAAACCG‑ACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGta < 2:113039/100‑1 (MQ=255) ccaccaACTCAGGGCTGGAAAGTAAAAAACCG‑ACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGtat > 2:2602711/1‑100 (MQ=255) ccaccaACTCAGGGCTGGAAAGTAAAAAACCG‑ACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGtat > 1:1490253/1‑100 (MQ=255) caccaACTCAGGGCTGGAAAGTAAAAAACCG‑ACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGtata > 2:1011671/1‑100 (MQ=255) ccaACTCAGGGGTGGAAAGTAAAAAACCG‑ACGCAAAGGCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGtatata < 2:1948481/100‑1 (MQ=37) aaCTCAGGGCTGGAAAGTAAAAAACCG‑ACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATaaa > 1:1866082/1‑100 (MQ=255) aaCTCAGGGCTGGAAAGTAAAAAACCG‑ACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATaaa > 1:1416681/1‑100 (MQ=255) cTCAGGGCTGGAAAGTAAAAAACCG‑ACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATc > 1:619970/1‑100 (MQ=255) cTCAGGGCTGGAAAGTAAAAAACCG‑ACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATc < 2:1993903/100‑1 (MQ=255) cAGGGCTGGAAAGTAAAAAACCG‑ACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGt > 2:2108780/1‑100 (MQ=255) aGGGCTGGAAAGTAAAAAACCG‑ACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTc < 1:2753427/100‑1 (MQ=255) aGGGCTGGAAAGTAAAAAACCG‑ACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTc < 1:1497011/100‑1 (MQ=255) gggCTGGAAAGTAAAAAACCG‑ACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCa > 2:946351/1‑100 (MQ=255) ggCTGGAAAGTAAAAAACCG‑ACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCa < 1:1672536/99‑1 (MQ=255) ggCTGGAAAGTAAAAAACCG‑ACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCAc > 1:1717121/1‑100 (MQ=255) cTGGAAAGTAAAAAACCG‑ACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTg < 2:2610232/100‑1 (MQ=255) ggAAAGTAAAAAACCG‑ACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCg < 1:1026982/100‑1 (MQ=255) ggAAAGTAAAAAACCG‑ACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCg > 2:1716298/1‑100 (MQ=255) gAAAGTAAAAAACCG‑ACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGa > 2:1299973/1‑100 (MQ=255) aaaGTAAAAAACCG‑ACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGat < 2:2656327/100‑1 (MQ=255) aaaGTAAAAAACCG‑ACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGat < 1:2719468/100‑1 (MQ=255) aaGTAAAAAACCG‑ACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGata > 2:1628825/1‑100 (MQ=255) gTAAAAAACCG‑ACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGatata > 2:2711450/1‑100 (MQ=255) tAAAAAACCG‑ACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGatatat > 2:2487559/1‑100 (MQ=255) tAAAAAACCG‑ACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGatatat > 1:2900306/1‑100 (MQ=255) tAAAAAACCG‑ACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACAATTACCCAGTGAAAGTATATAAATTGTCACTGCGaaatat > 2:2431704/1‑100 (MQ=38) aaaaaaCCG‑ACGCAAAGTCGG‑TTTTTTACATCGGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGAtatata > 2:2758161/1‑100 (MQ=255) aaaaaCCG‑ACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATAc > 2:2690474/1‑100 (MQ=255) aaaaCCG‑ACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATAcc < 2:2666870/100‑1 (MQ=255) aaCCG‑ACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGa < 1:1011660/100‑1 (MQ=255) aaCCG‑ACGCAAAGTCGG‑TTTTTTACATCCGGATTCCGACACGGCTTAATATGACGTTGACCCAGTAAAAGTATATAAATCGTGACTGCGATATATAccaa > 1:2427716/1‑98 (MQ=255) aCCG‑ACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGaa > 2:2414523/1‑100 (MQ=255) ccG‑ACGCAAAGTCGGTTTTTTT‑TTTTTTTTTTCGGACAAGACGTAATATGACGATGACCCATTGAAAGTATATAAATCGTCACTGCGCTATATACCGacg > 1:1233686/1‑98 (MQ=255) actttgcgTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGc > 2:38929/8‑100 (MQ=255) cGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGct > 1:2044727/1‑100 (MQ=255) gCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGctc > 2:51776/1‑100 (MQ=255) cAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGctcc < 2:2830619/100‑1 (MQ=255) cAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGctcc > 2:2759058/1‑100 (MQ=255) cAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGctcc > 1:2742492/1‑100 (MQ=255) cAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGctcc < 2:2380700/100‑1 (MQ=255) cAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGctcc > 1:2647845/1‑100 (MQ=255) aaaGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGctccc > 2:545260/1‑100 (MQ=255) aaGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGctccct < 2:2145075/100‑1 (MQ=255) gTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGctccctcc < 2:1490277/100‑1 (MQ=255) gTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGctccctcc > 1:1982474/1‑100 (MQ=255) | CAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCG‑ACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGCTCCCTCC > NC_000913/3648039‑3648233 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |