Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,644,2890AC30.8% 283.6 / 191.5 196intergenic (‑6/+144)rlmN/ndkdual specificity 23S rRNA m(2)A2503, tRNA m(2)A37 methyltransferase, SAM‑dependent/multifunctional nucleoside diphosphate kinase and apyrimidinic endonuclease and 3'‑phosphodiesterase
Reads supporting (aligned to +/- strand):  ref base A (69/66);  new base C (0/60);  total (70/126)
Fisher's exact test for biased strand distribution p-value = 6.05e-15
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01

Only 100 of 196 total aligned reads displayed.

CTCCCGCATCTGCTGACGGTTGAGATCCAGCAGGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTGCATTGTACAAA  >  NC_000913/2644194‑2644386
                                                                                               |                                                                                                 
cTCCCGCATCTGCTGACGGTTGAGATCCAGCAGGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTcc                                                                                               <  1:1213813/100‑1 (MQ=255)
cTCCCGCATCTGCTGACGGTTGAGATCCAGCAGGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTcc                                                                                               >  2:1788613/1‑100 (MQ=255)
   ccGCATCTGCTGACGGTTGAGATCCAGCAGGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGc                                                                                            <  1:1965670/100‑1 (MQ=255)
        tCTGCTGACGGTTGAGATCCAGCAGGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGt                                                                                       <  1:2123036/100‑1 (MQ=255)
         ctgctgACGGTTGAGATCCAGCAGGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGtt                                                                                      <  1:35070/100‑1 (MQ=255)
         ctgctgACGGTTGAGATCCAGCAGGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGtt                                                                                      <  1:2193037/100‑1 (MQ=255)
          tgctgcCGGTTGAGATACAGCAGGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTTTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGtta                                                                                     <  2:1991870/100‑1 (MQ=255)
          tgctgACGGTTGAGATCCAGCAGGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGtta                                                                                     <  1:103384/100‑1 (MQ=255)
           gctgACGGTTGAGATCCAGCAGGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGttat                                                                                    >  1:640563/1‑100 (MQ=255)
           gctgACGGTTGAGATCCAGCAGGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGttat                                                                                    >  2:343637/1‑100 (MQ=255)
           gctgACGGTTGAGATCCAGCAGGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGttat                                                                                    <  1:631235/100‑1 (MQ=255)
             tgACGGTTGAGATCCAGCAGGTTGATTTTTCCATCTTTGGTGGTGACGTTTTCTGGTGTGACTAATTGTTTAGACATATGTTTTTCCGGCGTCGttatt                                                                                   >  1:2736464/1‑99 (MQ=255)
             tgACGGTTGAGATCCAGCAGGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGttatta                                                                                  <  1:1396004/100‑1 (MQ=255)
             tgACGGTTGAGATCCAGCAGGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGttatt                                                                                   >  2:1024234/1‑99 (MQ=255)
               aCGGTTGAGATCCAGCAGGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCTGACATATGCTATTCCGGCCTCGTTATTaca                                                                                <  1:1904119/100‑1 (MQ=255)
               aCGGTTGAGATCCAGCAGGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTaca                                                                                <  2:953016/100‑1 (MQ=255)
                cGGTTGAGATCCAGCAGGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTacac                                                                               >  2:2593801/1‑100 (MQ=255)
                cGGTTGAGATCCAGCAGGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTacac                                                                               >  2:1548206/1‑100 (MQ=255)
                   ttGAGATCCAGCAGGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGtt                                                                            <  1:2433025/100‑1 (MQ=255)
                    tGAGATCCAGCAGGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTa                                                                           >  1:1697157/1‑100 (MQ=255)
                     gagaTCCAGCAGGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTAt                                                                          >  2:245795/1‑100 (MQ=255)
                      agaTCCAGCAGGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTCATTACACGTTATg                                                                         >  2:1687336/1‑100 (MQ=255)
                       gaTCCAGCAGGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATgg                                                                        >  2:2792470/1‑100 (MQ=255)
                          ccAGCAGGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGcc                                                                      >  1:1825223/1‑99 (MQ=255)
                           cagcagGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGTcccc                                                                    >  1:834845/1‑100 (MQ=255)
                           cagcagGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGcccc                                                                    <  1:2018135/100‑1 (MQ=255)
                           cagcagGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGcccc                                                                    <  1:663144/100‑1 (MQ=255)
                             gcagGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTg                                                                  <  2:249469/100‑1 (MQ=255)
                             gcagGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTg                                                                  >  2:1809600/1‑100 (MQ=255)
                             gcagGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTg                                                                  <  1:1050660/100‑1 (MQ=255)
                              cagGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTgg                                                                 <  2:1666349/100‑1 (MQ=255)
                              cagGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTgg                                                                 <  2:304951/100‑1 (MQ=255)
                              cagGTTGATTTTTCCAGCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTgg                                                                 <  1:2591702/100‑1 (MQ=255)
                                   tGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAggg                                                             >  2:1402281/1‑99 (MQ=255)
                                    gATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGtt                                                           <  2:1549947/100‑1 (MQ=255)
                                     aTTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTg                                                          <  2:2109394/100‑1 (MQ=255)
                                     aTTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTg                                                          <  1:161620/100‑1 (MQ=255)
                                       ttttCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGaa                                                        <  2:1223360/100‑1 (MQ=255)
                                        tttCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGaaa                                                       <  2:376552/100‑1 (MQ=255)
                                         ttCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGaaaa                                                      <  2:2500122/100‑1 (MQ=255)
                                         ttCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGaaaa                                                      >  1:1200097/1‑100 (MQ=255)
                                           ccATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGaaaaaa                                                    >  2:206912/1‑100 (MQ=255)
                                            cATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAg                                                   >  1:957096/1‑100 (MQ=255)
                                              tCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGaa                                                 <  2:1386686/100‑1 (MQ=255)
                                                tttCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAAc                                               >  1:2468759/1‑100 (MQ=255)
                                                     tggtgACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGcccc                                          >  2:2868471/1‑100 (MQ=255)
                                                      ggtgACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGcccc                                          <  2:72962/99‑1 (MQ=255)
                                                      ggtgACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCg                                         >  1:2603550/1‑100 (MQ=255)
                                                        tgACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGcccccgg                                       >  2:1152658/1‑97 (MQ=255)
                                                         gACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTg                                      >  2:1856879/1‑100 (MQ=255)
                                                         gACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGGTGAAAAAAGAAACGCCCCGGt                                       >  2:781148/1‑99 (MQ=255)
                                                            gTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGc                                   >  2:2672636/1‑100 (MQ=255)
                                                             ttttCAGGTGTGACTAATTCTTCAGACATATGCTATTCCGACCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCg                                  <  1:1146367/100‑1 (MQ=255)
                                                              tttCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCgg                                 <  2:1264033/100‑1 (MQ=255)
                                                                  aGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGgctgc                             <  1:427973/100‑1 (MQ=255)
                                                                   ggTGTGACTAATTGTTCAGACATATGCTATTCCGGTCTCGTTATTACACGTTATGGCCCCTAAAGAGATAAAAAAAGAAACGCCCCGGTGAGCGgctgct                            <  1:2650954/100‑1 (MQ=255)
                                                                   ggTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGgctgct                            <  2:1825249/100‑1 (MQ=255)
                                                                   ggTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGgctgct                            >  2:1053576/1‑100 (MQ=255)
                                                                   ggTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGgctgct                            >  2:2769314/1‑100 (MQ=255)
                                                                        tgactggagTTCAGACGTGTGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTcc                       <  2:1843613/92‑1 (MQ=255)
                                                                         gactggagTTCAGACGTGTGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCg                      <  2:2157813/93‑1 (MQ=255)
                                                                         aCTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCg                      >  1:922850/1‑100 (MQ=255)
                                                                          actggagTTCAGACGTGTGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCgg                     <  2:2420709/94‑1 (MQ=255)
                                                                           ctggagTTCAGACGTGTGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCggg                    <  2:913050/95‑1 (MQ=255)
                                                                           ctggagTTCAGACGTGTGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCggg                    <  2:2394397/95‑1 (MQ=255)
                                                                            tggagTTCAGACGTGTGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCgggg                   <  2:324665/96‑1 (MQ=255)
                                                                            aaTTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCgggg                   >  1:48503/1‑100 (MQ=255)
                                                                            aaTTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCgggg                   <  2:1697183/100‑1 (MQ=255)
                                                                             ggagTTCAGACGTGTGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCggggg                  <  2:1926180/97‑1 (MQ=255)
                                                                             ggagTTCAGACGTGTGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCggggg                  <  2:1914922/97‑1 (MQ=255)
                                                                             ggagTTCAGACGTGTGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCggggg                  <  2:2778729/97‑1 (MQ=255)
                                                                             ggagTTCAGACGTGTGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCggggg                  <  2:1715053/97‑1 (MQ=255)
                                                                              gagTTCAGACGTGTGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGgc                 <  2:737897/98‑1 (MQ=255)
                                                                              gagTTCAGACGTGTGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGgc                 <  2:510246/98‑1 (MQ=255)
                                                                              gagTTCAGACGTGTGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGgc                 <  2:1482819/98‑1 (MQ=255)
                                                                               agTTCAGACGTGTGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGgcg                <  2:2806934/99‑1 (MQ=255)
                                                                                 ttCAGACGTGTGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCt              <  2:2670310/100‑1 (MQ=255)
                                                                                  tCAGACGTGTGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTg             <  2:391485/100‑1 (MQ=255)
                                                                                   cagacgtgtGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTGc            <  2:1468217/92‑1 (MQ=255)
                                                                                    agacgtgtGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTgta           <  2:2685802/93‑3 (MQ=255)
                                                                                    agacgtgtGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTGCa           <  2:923548/93‑1 (MQ=255)
                                                                                    agacgtgtGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTGCa           <  2:2103235/93‑1 (MQ=255)
                                                                                    aGACGTGTGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTGCa           <  2:2028835/100‑1 (MQ=255)
                                                                                    aGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTGCa           <  1:15443/100‑1 (MQ=255)
                                                                                     gacgtgtGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTGCAt          <  2:1609536/94‑1 (MQ=255)
                                                                                     gacgtgtGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTGCAt          <  2:581804/94‑1 (MQ=255)
                                                                                     gACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTGCAt          >  2:440293/1‑100 (MQ=255)
                                                                                       cATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTGCATTg        >  2:1705759/1‑100 (MQ=255)
                                                                                       cATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTGCATTg        >  2:331098/1‑100 (MQ=255)
                                                                                       cATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTGCATTg        <  2:266825/100‑1 (MQ=255)
                                                                                        gtgtGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTGCATTGt       <  2:2115939/97‑1 (MQ=255)
                                                                                         tgtGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTGCATTGTa      <  2:2577596/98‑1 (MQ=255)
                                                                                         tatGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTGCATTGTa      <  1:542868/100‑1 (MQ=255)
                                                                                          gtGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTGCATTGTa      <  2:1106500/98‑1 (MQ=255)
                                                                                          gtGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTGCATTGTAc     <  2:2282330/99‑1 (MQ=255)
                                                                                          gtGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTGCATTGTAc     <  2:130073/99‑1 (MQ=255)
                                                                                          atGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGACGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTGCATTGTAc     <  2:688650/100‑1 (MQ=255)
                                                                                           tGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTGCATTGTACa    >  2:1881800/1‑100 (MQ=255)
                                                                                             cTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTGCATTGTACaaa  >  2:1759606/1‑100 (MQ=255)
                                                                                             cTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTGCATTGTACaaa  <  2:194117/100‑1 (MQ=255)
                                                                                               |                                                                                                 
CTCCCGCATCTGCTGACGGTTGAGATCCAGCAGGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTGCATTGTACAAA  >  NC_000913/2644194‑2644386

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑