Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 91,554 A→G I48V (ATC→GTC)  ftsI → transpeptidase involved in septal peptidoglycan synthesis; penicillin‑binding protein 3

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_00091391,5540AG93.5% 338.8 / 5.6 108I48V (ATC→GTC) ftsItranspeptidase involved in septal peptidoglycan synthesis; penicillin‑binding protein 3
Reads supporting (aligned to +/- strand):  ref base A (2/5);  new base G (39/62);  total (41/67)
Fisher's exact test for biased strand distribution p-value = 7.07e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.89e-01

Only 100 of 108 total aligned reads displayed.

ACATGCCAACTTTATCAGTTGGCGTTTTGCGTTGTTATGCGGCTGTATTCTCCTGGCGCTGGCTTTTCTGCTCGGACGCGTAGCGTGGTTACAAGTTATCTCCCCGGATATGCTGGTGAAAGAGGGCGACATGCGTTCTCTTCGCGTTCAGCAAGTTTCCACCTCCCGCGGCATGATTACTGACCGTTCTGG  >  NC_000913/91457‑91648
                                                                                                 |                                                                                              
aCATGCCAACTTTATCAGTTGGCGTTTTGCGTTGTTATGCGGCTGTATTCTCCTGGCGCTGGCTTTTCTGCTCGGACGCGTAGCGTGGTTACAAGTTGtc                                                                                              <  1:1067377/100‑1 (MQ=255)
aCATGCCAACTTTATCAGTTGGCGTTTTGCGTTGTTATGCGGCTGTATTCTCCTGGCGCTGGCTTTTCTGCTCGGACGCGTAGCGTGGTTACAAGTTGtc                                                                                              <  2:1593724/100‑1 (MQ=255)
 cATGCCAACTTTATCAGTTGGCGTTTTGCGTTGTTATGCGGCTGTATTCTCCTGGCGCTGGCTTTTCTGCTCGGACGCGTAGCGTGGTTACAAGTTGtct                                                                                             >  2:2005074/1‑100 (MQ=255)
    gCCAACTTTATCAGTTGGCGTTTTGCGTTGTTATGCGGCTGTATTCTCCTGGCGCTGGCTTTTCTGCTCGGACGCGTAGCGTGGTTACAAGTTGTCTccc                                                                                          >  1:2434744/1‑100 (MQ=255)
    gCCAACTTTATCAGTTGGCGTTTTGCGTTGTTATGCGGCTGTATTCTCCTGGCGCTGGCTTTTCTGCTCGGACGCGTAGCGTGGTTACAAGTTGTCTccc                                                                                          >  2:1148258/1‑100 (MQ=255)
     ccAACTTTATCAGTTGGCGTTTTGCGTTGTTATGCGGCTGTATTCTCCTGGCGCTGGCTTTTCTGCTCGGACGCGTAGCGTGGTTACAAGTTGTCTcccc                                                                                         <  1:44292/100‑1 (MQ=255)
     ccAACTTTATCAGTTGGCGTTTTGCGTTGTTATGCGGCTGTATTCTCCTGGCGCTGGCTTTTCTGCTCGGACGCGTAGCGTGGTTACAAGTTGTCTcccc                                                                                         >  1:1293010/1‑100 (MQ=255)
      cAACTTTATCAGTTGGCGTTTTGCGTTGTTATGCGGCTGTATTCTCCTGGCGCTGGCTTTTCTGCTCGGACGCGTAGCGTGGTTACAAGTTGTCTCCCCg                                                                                        <  1:1209479/100‑1 (MQ=255)
      cAACTTTATCAGTTGGCGTTTTGCGTTGTTATGCGGCTGTATTCTCCTGGCGCTGGCTTTTCTGCTCGGACGCGTAGCGTGGTTACAAGTTGTCTCCCCg                                                                                        <  1:556918/100‑1 (MQ=255)
       aaCTTTATCACTTGGCGTTTTGCGTTGTTATGCGGCTGTATTCTCCTGGCGCTGGCTTTTCTGCTCGGACGCGTAGCGTGGTTACAAGTTGTCTCCCCgg                                                                                       <  1:1912455/100‑1 (MQ=255)
        aCTTTATCAGTTGGCGTTTTGCGTTGTTATGCGGCTGTATTCTCCTGGCGCTGGCTTTTCTGCTCGGACGCGTAGCGTGGTTACAAGTTGTCTCCCCGGa                                                                                      <  2:2336061/100‑1 (MQ=255)
        aCTTTATCAGTTGGCGTTTTGCGTTGTTATGCGGCTGTATTCTCCTGGCGCTGGCTTTTCTGCTCGGACGCGTAGCGTGGTTACAAGTTGTCTCCCCGGa                                                                                      <  1:2559010/100‑1 (MQ=255)
         cTTTATCAGTTGGCGTTTTGCGTTGTTATGCGGCTGTATTCTCCTGGCGCTGGCTTTTCTGCTCGGACGCGTAGCGTGGTTACAAGTTGTCTCCCCGGat                                                                                     <  1:804346/100‑1 (MQ=255)
          tttATCAGTTGGCGTTTTGCGTTGTTATGCGGCTGTATTCTCCTGGCGCTGGCTTTTCTGCTCGGACGCGTAGCGTGGTTACAAGTTGTCTCCCCGGata                                                                                    <  1:1802742/100‑1 (MQ=255)
          tgataaaGTTGGCGTTTTGCGTTGTTATGCGGCTGTATTCTCCTGGCGCTGGCTTTTCTGCTCGGACGCGTAGCGTGGTTACAAGTTGTCTCCCCGGata                                                                                    >  2:2305108/7‑100 (MQ=255)
             aTCAGTTGGCGTTTTGCGTTGTTATGCGGCTGTATTCTCCTGGCGCTGGCTTTTCTGCTCGGACGCGTAGCGTGGTTACAAGTTGTCTCCCCGGATATGc                                                                                 >  1:2407609/1‑100 (MQ=255)
              tCAGTTGGCGTTTTGCGTTGTTATGCGGCTGTAGTCTCCTGGCGCTGGCTTTTCTGCTCGGACGCGTAGCGTGGTTACAAGTTGTCTCCCCGGATATg                                                                                  <  1:1286217/98‑1 (MQ=255)
                aGTTGGCGTTTTGCGTTGTTATGCGGCTGTATTCTCCTGGCGCTGGCTTTTCTGCTCGGACGCGTAGCGTGGTTACAAGTTGTCTCCCCGGATATGCTgg                                                                              <  1:843527/100‑1 (MQ=255)
                aGTTGGCGTTTTGCGTTGTTATGCGGCTGTATTCTCCTGGCGCTGGCTTTTCTGCTCGGACGCGTAGCGTGGTTACAAGTTGTCTCCCCGGATATGCTgg                                                                              <  1:1412431/100‑1 (MQ=255)
                aGTTGGCGTTTTGCGTTGTTATGCGGCTGTATTCTCCTGGCGCTGGCTTTTCTGCTCGGACGCGTAGCGTGGTTACAAGTTGTCTCCCCGGATATGCTgg                                                                              >  2:2224182/1‑100 (MQ=255)
                aGTTGGCGTTTTGCGTTGTTATGCGGCTGTATTCTCCTGGCGCTGGCTTTTCTGCTCGGACGCGTAGCGTGGTTACAAGTTGTCTCCCCGGATATGCTgg                                                                              <  2:2331762/100‑1 (MQ=255)
                aGTTGGCGTTTTGCGTTGTTATGCGGCTGTATTCTCCTGGCGCTGGCTTTTCTGCTCGGACGCGTAGCGTGGTTACAAGTTGTCTCCCCGGATATGCTgg                                                                              <  2:2895990/100‑1 (MQ=255)
                 gTTGGCGTTTTGCGTTGTTATGCGGCTGTATTCTCCTGGCGCTGGCTTTTCTGCTCGGACGCGTAGCGTGGTTACAAGTTGTCTCCCCGGATATGCTGGt                                                                             <  2:1221898/100‑1 (MQ=255)
                 gTTGGCGTTTTGCGTTGTTATGCGGCTGTATTCTCCTGGCGCTGGCTTTTCTGCTCGGACGCGTAGCGTGGTTACAAGTTGTCTCCCCGGATATGCTGGt                                                                             >  1:2491488/1‑100 (MQ=255)
                  ttGGCGTTTTGCGTTGTTATGCGGCTGTATTCTCCTGGCGCTGGCTTTTCTGCTCGGACGCGTAGCGTGGTTACAAGTTGTCTCCCCGGATATGCTGGTg                                                                            <  2:1091673/100‑1 (MQ=255)
                     gCGTTTTGCGTTGTTATGCGGCTGTATTCTCCTGGCGCTGGCTTTTCTGCTCGGACGCGTAGCGTGGTTACAAGTTGTCTCCCCGGATATGCTGGTGaaa                                                                         <  2:1642770/100‑1 (MQ=255)
                      cGTTTTGCGTTGTTATGCGGCTGTATTCTCCTGGCGCTGGCTTTTCTGCTCGGACGCGTAGCGTGGTTACAAGTTGTCTCCCCGGATATGCTGGTGAAag                                                                        <  1:2224155/100‑1 (MQ=255)
                         tttGCGTTGTTATGCGGCTGTATTCTCCTGGCGCTGGCTTTTCTGCTCGGACGCGTAGCGTGGTTACAAGTTGTCTCCCCGGATATGCTGGTGAAAGAgg                                                                     >  2:62270/1‑100 (MQ=255)
                          ttGCGTTGTTATGCGGCTGTATTCTCCTGGCGCTGGCTTTTCTGCTCGGACGCGTAGCGTGGTTACAAGTTGTCTCCCCGGATATGCTGGTGAAAGAggg                                                                    <  2:1932002/100‑1 (MQ=255)
                          ttGCGTTGTTATGCGGCTGTATTCTCCTGGCGCTGGCTTTTCTGCTCGGACGCGTAGCGTGGTTACAAGTTGTCTCCCCGGATATGCTGGTGAAAGAggg                                                                    <  2:1913615/100‑1 (MQ=255)
                           tGCGTTGTTATGCGGCTGTATTCTCCTGGCGCTGGCTTTTCTGCTCGGACGCGTAGCGTGGTTACAAGTTGTCTCCCCGGATATGCTGGTGAAAGAgggn                                                                   <  1:618930/100‑2 (MQ=255)
                           tGCGTTGTTATGCGGCTGTATTCTCCTGGCGCTGGCTTTTCTGCTCGGACGCGTAGCGTGGTTACAAGTTGTCTCCCCGGATATGCTGGTGAAAGAGGGc                                                                   >  1:276563/1‑100 (MQ=255)
                             cGTTGTTATGCGGCTGTATTCTCCTGGCGCTGGCTTTTCTGCTCGGACGCGTAGCGTGGTTACAAGTTGTCTCCCCGGATATGCTGGTGAAAGAGGGCGa                                                                 >  2:342663/1‑100 (MQ=255)
                             cGTTGTTATGCGGCTGTATTCTCCTGGCGCTGGCTTTTCTGCTCGGACGCGTAGCGTGGTTACAAGTTGTCTCCCCGGATATGCTGGTGAAAGAGGGCGa                                                                 <  2:1817773/100‑1 (MQ=255)
                              gttgttATGCGGCTGTATTCTCCTGGCGCTGGCTTTTCTGCTCGGACGCGTAGCGTGGTTACAAGTTGTCTCCCCGGATATGCTGGTGAAAGAGGGCGAc                                                                >  2:1456910/1‑100 (MQ=255)
                               ttgttATGCGGCTGTATTCTCCTGGCGCTGGCTTTTCTGCTCGGACGCGTAGCGTGGTTACAAGTTGTCTCCCCGGATATGCTGGTGAAAGAGGGCGACa                                                               <  1:1999851/100‑1 (MQ=255)
                                 gttATGCGGCTGTATTCTCCTGGCGCTGGCTTTTCTGCTCGGACGCGTAGCGTGGTTACAAGTTGTCTCCGCGGATATGCTGGTGAAAGAGGGCGACATg                                                             <  1:928358/100‑1 (MQ=255)
                                 gttATGCGGCTGTATTCTCCTGGCGCTGGCTTTTCTGCTCGGACGCGTAGCGTGGTTACAAGTTGTCTCCCCGGATATGCTGGTGAAAGAGGGCGACATg                                                             <  1:574966/100‑1 (MQ=255)
                                   tATGCGGCTGTATTCTCCTGGCGCTGGCTTTTCTGCTCGGACGCGTAGCGTGGTTACAAGTTGTCTCCCCGGATATGCTGGTGAAAGAGGGCGACATGCg                                                           <  1:1847110/100‑1 (MQ=255)
                                   tATGCGGCTGTATTCTCCTGGCGCTGGCTTTTCTGCTCGGACGCGTAGCGTGGTTACAAGTTATCTCCCCGGATATGCTGGTGAAAGAGGGCGACATGCg                                                           >  2:116769/1‑100 (MQ=255)
                                   tATGCGGATGTATTCCCCTGGCGCTGGCTTTGCTGCTCGGACGCGTAGCCTGGTTACAAGTTGTCTCCCCGGATATGCTGGTGAAAGAGGGCGACATGCg                                                           <  2:2650548/100‑1 (MQ=255)
                                     tGCGGCTGTATTGTCCTGGCGCTGGCTTTTCTGCTCGGACGCGTAGCGTGGTTACAAGTTGTCTCCCCGGATATGCTGGTGAAAGAGGGCGACATGCGtt                                                         >  2:1912272/1‑100 (MQ=255)
                                     tGCGGCTGTATTCTCCTGGCGCTGGCTTTTCTGCTCGGACGCGTAGCGTGGTTACAAGTTGTCTCCCCGGATATGCTGGTGAAAGAGGGCGACATGCGtt                                                         >  2:2390235/1‑100 (MQ=255)
                                     tGCGGCTGTATTCTCCTGGCGCTGGCTTTTCTGCTCGGACGCGTAGCGTGGTTACAAGTTGTCTCCCCGGATATGCTGGTGAAAGAGGGCGACATGCGtt                                                         <  2:1246495/100‑1 (MQ=255)
                                         gCTGTATTCTCCTGGCGCTGGCTTTTCTGCTCGGACGCGTAGCGTGGTTACAAGTTGTCTCCCCGGATATGCTGGTGAAAGAGGGCGACATGCGtt                                                         <  1:684767/96‑1 (MQ=255)
                                           ngTATTCTCCTGGCGCTGGCTTTTCTGCTCGGACGCGTAGCGTGGTTACAAGTTGTCTCCCCGGCTATGCTGGTGAAAGAGGGCGACATGCGTTCTCTTc                                                   >  1:1095452/2‑100 (MQ=255)
                                            cgatcttcCTGGCGCTGGCTTTTCTGCTCGGACGCGTAGCGTGGTTACAAGTTGTCTCCCCGGATATGCTGGTGAAAGAGGGCGACATGCGTTCTCTTcg                                                  <  1:2380939/94‑1 (MQ=255)
                                              aTTCTCCTGGCGCTGGCTTTTCTGCTCGGACGCGTAGCGTGGTTACAAGTTGTCTCCCCGGATATGCTGGTGAAAGAGGGCGACATGCGTTCTCTTcgcg                                                <  2:1438063/100‑1 (MQ=255)
                                               ttCTCCTGGCGCTGGCTTTTCTGCTCGGACGCGTAGCGTGGTTACAAGTTGTCTCCCCGGATATGCTGGTGAAAGAGGGCGACATGCGTTCTCTTCGCGt                                               >  1:1354590/1‑100 (MQ=255)
                                                tctcCTGGCGCTGGCTTTTCTGCTCGGACGCGTAGCGTGGTTACAAGTTGTCTCCCCGGATATGCTGGTGAAAGAGGGCGACATGCGTTCTCTTCGCGtt                                              >  1:1169954/1‑100 (MQ=255)
                                                  tcCTGGCGCTGGCTTTTCTGCTCGGACGCGTAGCGTGGTTACAAGTTGTCTCCCCGGATATGCTGGTGAAAGAGGGCGACATGCGTTCTCTTcgagatcg                                            >  2:2380969/1‑94 (MQ=255)
                                                   ccTGGCGCTGGCTTTTCTGCTCGGACGCGTAGCGTGGTTACAAGTTGTCTCCCCGGATATGCTGGTGAAAGAGGGCGACATGCGTTCTCTTCGCGTTCAg                                           >  1:757722/1‑100 (MQ=255)
                                                   ccTGGCGCTGGCTTTTCTGCTCGGACGCGTAGCGTGGTTACAAGTTGTCTCCCCGGATATGCTGGTGAAAGAGGGCGACATGCGTTCTCTTCGCGTTCAg                                           <  1:2342414/100‑1 (MQ=255)
                                                     tGGCGCTGGCTTTTCTGCTCGGACGCGTAGCGTGGTTACAAGTTGTCTCCCCGGATATGCTGGTGAAAGAGGGCGACATGCGTTCTCTTCGCGTTCAGCa                                         <  1:1408299/100‑1 (MQ=255)
                                                      ggCGCTGGCTTTTCTGCTCGGACGCGTAGCGTGGTTACAAGTTGTCTCCCCGGATATGCTGGTGAAAGAGGGCGACATGCGTTCTCTTCGCGTTCAGCaa                                        >  2:1745954/1‑100 (MQ=255)
                                                       gcgcTGGCTTTTCTGCTCGGACGCGTAGCGTGGTTACAAGTTGTCTCCCCGGATATGCTGGTGAAAGAGGGCGACATGCGTTCTCTTCGCGTTCAGCAAg                                       <  2:1243198/100‑1 (MQ=255)
                                                          cTGGCTTTTCTGCTCGGACGCGTAGCGTGGTTACAAGTTGTCTCCCCGGATATGCTGGTGAAAGAGGGCGACATGCGTTCTCTTCGCGTTCAGCAAGttt                                    <  2:2307727/100‑1 (MQ=255)
                                                          cTGGCTTTTCTGCTCGGACGCGTAGCGTGGTTACAAGTTATCTCCCCGGATATGCTGGTGAAAGAGGGCGACATGCGTTCTCTTCGCGTTCAGCAAGttt                                    <  1:735126/100‑1 (MQ=255)
                                                          cTGGCTTTTCTGCTCGGACGCGTAGCGTGGTTACAAGTTATCTCCCCGGATATGCTGGTGAAAGAGGGCGACATGCGTTCTCTTCGCGTTCAGCAAGttt                                    <  1:735140/100‑1 (MQ=255)
                                                            tctttttCTGCTCGGACGCGTAGCGTGGTTACAAGTTGTCTCCCCGGATATGCTGGTGAAAGAGGGCGACATGCGTTCTCTTCGCGTTCAGCAAGTTTcc                                  <  2:1276260/97‑1 (MQ=255)
                                                            ggCTTTTCTGCTCGGACGCGTAGCGTGGTTACAAGTTGTCTCCCCGGATATGCTGGTGAAAGAGGGCGACATGCGTTCTCTTCGCGTTCAGCAAGTTTcc                                  >  1:508620/1‑100 (MQ=255)
                                                             gCTTTTCTGCTCGGACGCGTAGCGTGGTTACAAGTTGTCTCCCCGGATATGCTGGTGAAAGAGGGCGACATGCGTTCTCTTCGCGTTCAGCAAGTTTCCa                                 <  2:2277541/100‑1 (MQ=255)
                                                              cTTTTCTGCTCGGACGCGTAGCGTGGTTACAAGTTGTCTCCCCGGATATGCTGGTGAAAGAGGGCGACATGCGTTCTCTTCGCGTTCAGCAAGTTTCCAc                                >  2:1426965/1‑100 (MQ=255)
                                                              cTTTTCTGCTCGGACGCGTAGCGTGGTTACAAGTTGTCTCCCCGGATATGCTGGTGAAAGAGGGCGACATGCGTTCTCTTCGCGTTCAGCAAGTTTCCAc                                >  2:75994/1‑100 (MQ=255)
                                                              cTTTTCTGCTCGGACGCGTAGCGTGGTTACAAGTTGTCTCCCCGGATATGCTGGTGAAAGAGGGCGACATGCGTTCTCTTCGCGTTCAGCAAGTTTCCAc                                >  1:1796111/1‑100 (MQ=255)
                                                               ttttCTGCTCGGACGCGTAGCGTGGTTACAAGTTGTCTCCCCGGATATGCTGGTGAAAGAGGGCGACATGCGTTCTCTTCGCGTTCAGCAAGTTTCCaga                               >  1:1276242/1‑98 (MQ=255)
                                                                 ttCTGCTCGGACGCGTAGCGTGGTTACAAGTTGTCTCCCCGGATATGCTGGTGAAAGAGGGCGACATGCGTTCTCTTCGCGTTCAGCAAGTTTCCACCTc                             <  1:56520/100‑1 (MQ=255)
                                                                 ttCTGCTCGGACGCGTAGCGTGGTTACAAGTTGTCTCCCCGGATATGCTGGTGAAAGAGGGCGACATGCGTTCTCTTCGCGTTCAGCAAGTTTCCACCTc                             >  1:2209795/1‑100 (MQ=255)
                                                                  tCTGCTCGGACGCGTAGCGTGGTTACAAGTTGTCTCCCCGGATATGCTGGTGAAAGAGGGCGACATGCGTTCTCTTCGCGTTCAGCAAGTTTCCACCTcc                            <  1:2318416/100‑1 (MQ=255)
                                                                      cTCGGACGCGTAGCGTGGTTACAAGTTGTCTCCCCGGATATGCTGGTGAAAGAGGGCGACATGCGTTCTCTTCGCGTTCAGCAAGTTTCCACCTCCcgcg                        <  2:239363/100‑1 (MQ=255)
                                                                       tCGGACGCGTAGCGTGGTTACAAGTTGTCTCCCCGGATATGCTGGTGAAAGAGGGCGACATGCGTTCTCTTCGCGTTCAGCAAGTTTCCACCTCCCGCgg                       <  2:174640/100‑1 (MQ=255)
                                                                       tCGGACGCGTAGCGTGGTTACAAGTTGTCTCCCCGGATATGCTGGTGAAAGAGGGCGACATGCGTTCTCTTCGCGTTCAGCAAGTTTCCACCTCCCGCgg                       <  2:1276403/100‑1 (MQ=255)
                                                                        cGGACGCGTAGCGTGGTTACAAGTTGTCTCCCCGGATATGCTGGTGAAAGAGGGCGACATGCGTTCTCTTCGCGTTCAGCAAGTTTCCACCTCCCGCGGc                      >  1:1330060/1‑100 (MQ=255)
                                                                         ggACGCGTAGCGTGGTTACAAGTTGTCTCCCCGGATATGCTGGTGAAAGAGGGCGACATGCGTTCTCTTCGCGTTCAGCAAGTTTCCACCTCCCGCGGCa                     >  1:1056551/1‑100 (MQ=255)
                                                                          gACGCGTAGCGTGGTTACAAGTTGTCTCCCCGGATATGCTGGTGAAAGAGGGCGACATGCGTTCTCTTCGCGTTCAGCAAGTTTCCACCTCCCGCGGCAt                    >  2:393621/1‑100 (MQ=255)
                                                                          gACGCGTAGCGTGGTTACAAGTTGTCTCCCCGGATATGCTGGTGAAAGAGGGCGACATGCGTTCTCTTCGCGTTCAGCAAGTTTCCACCTCCCGCGGCAt                    <  2:2646499/100‑1 (MQ=255)
                                                                             gcgTAGCGTGGTTACAAGTTGTCTCCCCGGATATGCTGGTGAAAGAGGGCGACATGCGTTCTCTTCGCGTTCAGCAAGTTTCCACCTCCCGCGGCATGa                  <  1:2391790/99‑1 (MQ=255)
                                                                             gcgTAGCGTGGTTACAAGTTATCTCCCCGGATATGCTGGTGAAAGAGGGCGACATGCGTTCTCTTCGCGTTCAGCAAGTTTCCACCTCCCGCGGCATGAt                 <  2:1515750/100‑1 (MQ=255)
                                                                               gtcgcttGGGTACAAGTTATCTCGCCGGATATGCTGGAGAAAGAGGGCGACCTGCGTTCTCTTCGCGTTTAGCCTGATTCAACCTCCCGCgg                       >  1:2774065/7‑92 (MQ=255)
                                                                               gTAGCGTGGTTACAAGTTGTCTCCCCGGATATGCTGGTGAAAGAGGGCGACATGCGTTCTCTTCGCGTTCAGCAAGTTTCCACCTCCCGCGGCATGAtt                <  1:2425060/99‑1 (MQ=255)
                                                                                tAGCGTGGTTACAAGTTGTCTCCCCGGATATGCTGGTGAAAGAGGGCGACATGCGTTCTCTTCGCGTTCAGCAAGTTTCCACCTCCCGCGGCATGATTAc              >  2:1136247/1‑100 (MQ=255)
                                                                                tAGCGTGGTTACAAGTTGTCTCCCCGGATATGCTGGTGAAAGAGGGCGACATGCGTTCTCTTCGCGTTCAGCAAGTTTCCACCTCCCGCGGCATGATTAc              <  2:2494937/100‑1 (MQ=255)
                                                                                 aGCGTGGTTACAAGTTGTCTCCCCGGATATGCTGGTGAAAGAGGGCGACATGCGTTCTCTTCGCGTTCAGCAAGTTTCCACCTCCCGCGGCATGATTACt             <  2:2660363/100‑1 (MQ=255)
                                                                                 aGCGTGGTTACAAGTTGTCTCCCCGGATATGCTGGTGAAAGAGGGCGACATGCGTTCTCTTCGCGTTCAGCAAGTTTCCACCTCCCGCGGCATGATTACt             >  2:2885598/1‑100 (MQ=255)
                                                                                  gCGTGGTTACAAGTTGTCTCCCCGGATATGCTGGTGAAAGAGGGCGACATGCGTTCTTTTCGCGTTCAGCAAGTTTCCACCTCCCGTGGCATGATTACTg            <  2:1965159/100‑1 (MQ=255)
                                                                                  gCGTGGTTACAAGTTGTCTCCCCGGATATGCTGGTGAAAGAGGGCGACATGCGTTCTCTTCGCGTTCAGCAAGTTTCCACCTCCCGCGGCATGATTACTg            <  2:2794511/100‑1 (MQ=255)
                                                                                  gCGTGGTTACAAGTTGTCTCCCCGGATATGCTGGTGAAAGAGGGCGACATGCGTTCTCTTCGCGTTCAGCAAGTTTCCACCTCCCGCGGCATGATTACTg            <  2:807583/100‑1 (MQ=255)
                                                                                  gCGTGGTTACAAGTTGTCTCCCCGGATATGCTGGTGAAAGAGGGCGACATGCGTTCTCTTCGCGTTCAGCAAGTTTCCACCTCCCGCGGCATGATTACTg            <  2:2332503/100‑1 (MQ=255)
                                                                                  gCGTGGTTACAAGTTGTCTCCCCGGATATGCTGGTGAAAGAGGGCGACATGCGTTCTCTTCGCGTTCAGCAAGTTTCCACCTCCCGCGGCATGATTACTg            >  1:159237/1‑100 (MQ=255)
                                                                                  gCGTGGTTACAAGTTATCTCCCCGGATATGCTGGTGAAAGAGGGCGACATGCGTTCTCTTCGCGTTCAGCAAGTTTCCACCTCCCGCGGCATGATTACTg            <  2:1484966/100‑1 (MQ=255)
                                                                                    gTGGTTACAAGTTGTCTCCCCGGATATGCTGGTGAAAGAGGGCGACATGCGTTCTCTTCGCGTTCAGCAAGTTTCCACCTCCCGCGGCATGATTACTGAc          >  2:1760378/1‑100 (MQ=255)
                                                                                    gTGGTTACAAGTTGTCTCCCCGGATATGCTGGTGAAAGAGGGCGACATGCGTTCTCTTCGCGTTCAGCAAGTTTCCACCTCCCGCGGCATGATTACTGAc          >  2:52276/1‑100 (MQ=255)
                                                                                    gTGGTTACAAGTTGTCTCCCCGGATATGCTGGTGAAAGAGGGCGACATGCGTTCTCTTCGCGTTCAGCAAGTTTCCACCTCCCGCGGCATGATTACTGAc          >  1:1665689/1‑100 (MQ=255)
                                                                                    gTGGTTACAAGTTGTCTCCCCGGATATGCTGGTGAAAGAGGGCGACATGCGTTCTCTTCGCGTTCAGCAAGTTTCCACCTCCCGCGGCATGATTACTGAc          <  1:847466/100‑1 (MQ=255)
                                                                                     tGGTTACAAGTTGTCTCCCCGGATATGCTGGTGAAAGAGGGCGACATGCGTTCTCTTCGCGTTCAGCAAGTTTCCACCTCCCGCGGCATGATTACTGAcc         <  1:362384/100‑1 (MQ=255)
                                                                                     tGGTTACAAGTTGTCTCCCCGGATATGCTGGTGAAAGAGGGCGACATGCGTTCTCTTCGCGTTCAGCAAGTTTCCACCTCCCGCGGCATGATTACTGAcc         <  1:1897392/100‑1 (MQ=255)
                                                                                     tGGTTACAAGTTGTCTCCCCGGATATGCTGGTGAAAGAGGGCGACATGCGTTCTCTTCGCGTTCAGCAAGTTTCCACCTCCCGCGGCATGATTACTGAc          <  2:1341332/99‑1 (MQ=255)
                                                                                          acacGTTGTCTCCCCGGATATGCTGGTGAAAGAGGGCGACATGCGTTCTCTTCGCGTTCAGCAAGTTTCCACCTCCCGCGGCATGATTACTGACCGTTCt    <  1:1148240/100‑1 (MQ=255)
                                                                                          aCAAGTTATCTCCCCGGATATGCTGGTGAAAGAGGGCGACATGCGTTCTCTTCGCGTTCAGCAAGTTTCCACCTCCCGCGGCATGATTACTGACCGTTcn    <  1:1933044/100‑2 (MQ=255)
                                                                                            aaGTTGTCTCCCCGGATATGCTGGTGAAAGAGGGCGACATGCGTTCTCTTCGCGTTCAGCAAGTTTCCACCTCCCGCGGCATGATTACTGACCGTTCTgg  >  2:1224792/1‑100 (MQ=255)
                                                                                                 |                                                                                              
ACATGCCAACTTTATCAGTTGGCGTTTTGCGTTGTTATGCGGCTGTATTCTCCTGGCGCTGGCTTTTCTGCTCGGACGCGTAGCGTGGTTACAAGTTATCTCCCCGGATATGCTGGTGAAAGAGGGCGACATGCGTTCTCTTCGCGTTCAGCAAGTTTCCACCTCCCGCGGCATGATTACTGACCGTTCTGG  >  NC_000913/91457‑91648

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: