| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,866,592:1 | +C | 100% | coding (960/993 nt) | rpoS ← | RNA polymerase, sigma S (sigma 38) factor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,866,588 | 1 | . | C | 96.7% | 324.7 / 3.8 | 92 | coding (964/993 nt) | rpoS | RNA polymerase, sigma S (sigma 38) factor |
| Reads supporting (aligned to +/- strand): ref base . (2/1); new base C (56/33); total (58/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAG‑C‑C‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCTACA > NC_000913/2866491‑2866682 | tCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAG‑c‑c > 2:1791328/1‑100 (MQ=255)tCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAG‑c‑c > 1:1847416/1‑100 (MQ=255)tCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAG‑c > 2:2593729/1‑99 (MQ=255) cGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAG‑c‑c‑c < 1:719033/100‑1 (MQ=255) ccTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAG‑c‑c‑ccctg < 2:17888/100‑4 (MQ=255) cTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAG‑c‑c‑ccctgc > 2:1645111/1‑96 (MQ=255) tttATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAG‑C‑C‑CCTGCGtt < 1:726627/100‑1 (MQ=255) ttGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑C‑CCTGCGTTTGc < 1:1078315/100‑1 (MQ=255) ttGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑C‑CCTGCGTTTGc < 2:1280563/100‑1 (MQ=255) tgtgCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑C‑CCTGCGTTTGCa < 2:983071/100‑1 (MQ=255) tgtgCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑C‑CCTGCGTTTGCa > 1:694922/1‑100 (MQ=255) tgtgCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑C‑CCTGCGTTTGCa < 1:2487211/100‑1 (MQ=255) tgtgCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑C‑CCTGCGTTTGCa < 1:1648783/100‑1 (MQ=255) tgtgCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑C‑CCTGCGTTTGCa < 1:1237930/100‑1 (MQ=255) gtgCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑C‑CCTGCGTTTGCAg < 2:1764984/100‑1 (MQ=255) gtgCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑C‑CCTGCGTTTGCAg > 1:2147151/1‑100 (MQ=255) tgCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑C‑CCTGCGTTTGCAgg < 2:1046115/100‑1 (MQ=255) gCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAG‑CAC‑CCTGCGTTTGCAGGa > 1:670721/1‑100 (MQ=255) cacaGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑C‑CCTGCGTTTGCAGGAt > 2:1358423/1‑100 (MQ=255) cacaGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑C‑CCTGCGTTTGCAGGAt < 1:828506/100‑1 (MQ=255) acaGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTCCTCGCGGAACAGCGCTTCGATATTCAGCC‑C‑CCTGCGTTTGCAGGAtt > 1:1682501/1‑100 (MQ=255) caGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑C‑CCTGCGTTTGCAGGAttt > 1:1386728/1‑100 (MQ=255) caGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑C‑CCTGCGTTTGCAGGAttt > 1:1386715/1‑100 (MQ=255) caGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑C‑CCTGCGTTTGCAGGAttt > 2:1218230/1‑100 (MQ=255) aaaaGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑C‑CCTGCGTTTGCAGGATTTcgc < 1:412069/100‑1 (MQ=255) aaaaGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑C‑CCTGCGTTTGCAGGATTTcgc < 1:1953006/100‑1 (MQ=255) aaaGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑C‑CCTGCGTTTGCAGGATTTcgcg < 1:134417/100‑1 (MQ=255) aaGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑C‑CCTGCGTTTGCAGGATTTCgcgc < 2:812348/100‑1 (MQ=255) ggCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑C‑CCTGCGTTTGCAGGATTTCGCGCaa > 1:2245676/1‑100 (MQ=255) ggCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑C‑CCTGCGTTTGCAGGATTTCGCGCaa > 1:995770/1‑100 (MQ=255) tccgatctcTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑C‑CCTGCGTTTGCAGGATTTCGCGCAAACg < 1:675391/92‑1 (MQ=255) cAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑C‑CCTGCGTTTGCAGGATTTCGCGCAAACg > 1:2453361/1‑100 (MQ=255) gCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑C‑CCTGCGTTTGCAGGATTTCGCGCAAACGgc > 2:1653947/1‑100 (MQ=255) cTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑C‑CCTGCGTTTGCAGGATTTCGCGCAAACGgcgc < 2:971109/100‑1 (MQ=255) cTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑C‑CCTGCGTTTGCAGGATTTCGCGCAAACGgcgc > 2:802896/1‑100 (MQ=255) cGCTTGAGACTGGCCTTTCTGACGGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑C‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAg > 2:786248/1‑100 (MQ=255) cGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTATTCGCGGAACAGCGCTTCGATATTCAGCC‑C‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAg > 1:527324/1‑100 (MQ=255) cGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑C‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAg < 1:2551658/100‑1 (MQ=255) gCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑C‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAgg > 1:684233/1‑100 (MQ=255) gCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑C‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAgg > 1:572622/1‑100 (MQ=255) cTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑C‑CCTGCGTTTGCAGGATTTCGCGCAAACgagatcgga > 2:675387/1‑92 (MQ=255) ttGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑C‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGcc < 1:802149/100‑1 (MQ=255) tGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑C‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCt > 1:490208/1‑100 (MQ=255) agaCTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑C‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTc < 2:963560/100‑1 (MQ=255) agaCTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑C‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTc > 1:228212/1‑100 (MQ=255) gaCTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑C‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCa > 1:1278269/1‑100 (MQ=255) gaCTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑C‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCa < 1:193427/100‑1 (MQ=255) gaCTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑C‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCa < 1:73533/100‑1 (MQ=255) gaCTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑C‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCa > 2:919934/1‑100 (MQ=255) aCTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑C‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCaa > 1:2516250/1‑100 (MQ=255) ntGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑C‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCa > 2:2294313/2‑98 (MQ=255) cTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑C‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAAc > 2:427572/1‑100 (MQ=255) tGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑C‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAAcc > 2:228184/1‑100 (MQ=255) tGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑C‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAAcc < 1:1248784/100‑1 (MQ=255) gCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑C‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTg > 1:264582/1‑100 (MQ=255) ccTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑C‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGa > 2:2517896/1‑100 (MQ=255) cTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑C‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGaa > 1:488197/1‑100 (MQ=255) cTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAG‑C‑CACCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTg > 1:555132/1‑100 (MQ=255) gACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑C‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGc > 1:2532422/1‑100 (MQ=255) gACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑C‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGc < 1:2253459/100‑1 (MQ=255) cAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑C‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGa > 1:245112/1‑100 (MQ=255) gATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑C‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAac > 1:832620/1‑100 (MQ=255) gATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑C‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAac < 2:394081/100‑1 (MQ=255) tGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑C‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGcctcacc > 2:2410490/1‑94 (MQ=255) cttacttaCTCGCGGAACAGCGCTTCGATATTCAGCC‑C‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGt > 1:15773/1‑100 (MQ=255) acttactCGCGGAACAGCGCTTCGATATTCAGCC‑C‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTc > 1:553995/1‑99 (MQ=255) cttactCGCGGAACAGCGCTTCGATATTCAGCC‑C‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCAc > 1:2323835/1‑100 (MQ=255) ttactCGCGGAACAGCGCTTCGATATTCAGCC‑C‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACg < 1:238720/100‑1 (MQ=255) actCGCGGAACAGCGCTTCGATATTCAGCC‑C‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACggg < 1:1284996/100‑1 (MQ=255) ctCGCGGAACAGCGCTTCGATATTCAGCC‑C‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGt > 2:1506308/1‑100 (MQ=255) tCGCGGAACAGCGCTTCGATATTCAGCC‑C‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTg < 2:53020/100‑1 (MQ=255) tCGCGGAACAGCGCTTCGATATTCAGCC‑C‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTg < 2:1228330/100‑1 (MQ=255) cgcgGAACAGCGCTTCGATATTCAGCC‑C‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGa > 2:1487927/1‑100 (MQ=255) cgcgGAACAGCGCTTCGATATTCAGCC‑C‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGa > 1:2583066/1‑100 (MQ=255) cgcgGAACAGCGCTTCGATATTCAGCC‑C‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGACGAACACGTTCACGGGTGa > 1:1480184/1‑100 (MQ=255) gcgGAACAGCGCTTCGATATTCAGCC‑C‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTggg > 1:2145973/1‑98 (MQ=255) ggAACAGCGCTTCGATATTCAGCC‑C‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGc < 2:363302/100‑1 (MQ=255) aCAGCGCTTCGATATTCAGCC‑C‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCaa > 1:2324797/1‑100 (MQ=255) cAGCGCTTCGATATTCAGCC‑C‑CCTGCGTTTGCAGGACTTCGCGCAAACGGCGCAGGCCTTCAACCTGAACCTGGCGAACACGTTCACGCGTGCGGCCAAt > 2:264032/1‑100 (MQ=255) ngcgcTTCGATATTCAGCC‑C‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAAtt > 1:894656/2‑100 (MQ=255) aGCGCTTCGATATTCAGCC‑C‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAAtt > 2:523565/1‑100 (MQ=255) aGCGCTTCGATATTCAGCC‑C‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAAt > 2:1478154/1‑99 (MQ=255) aGCGCTTCGATATTCAGCC‑C‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAAACTGAATCTGGAGAATACGTTCACGGGTGAGGCCAttt > 2:1975419/1‑100 (MQ=255) aGCGCTTCGATATTCAGCC‑C‑CCTGCGTTTGCAGGATTTCGCACAAACGGCGCAGGCCTTCACCCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAAtt > 2:1422974/1‑100 (MQ=255) gcgcTTCGATATTCAGCC‑C‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAAttt > 1:2420792/1‑100 (MQ=255) gcTTCGATATTCAGCC‑C‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCa < 1:1764162/100‑1 (MQ=255) cTTCGATATTCAGCC‑C‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCAc < 2:2245663/100‑1 (MQ=255) cTTCGATATTCAGCC‑C‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCAc > 1:1547518/1‑100 (MQ=255) cTTCGATATTCAGCC‑C‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCAc < 1:523569/100‑1 (MQ=255) cTTCGATATTCAGCC‑C‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCAc > 1:695608/1‑100 (MQ=255) tCGATATTCAGCC‑C‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGa > 2:1228633/1‑100 (MQ=255) tCGATATTCAGCC‑C‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGa > 1:890538/1‑100 (MQ=255) gATATTCAGCC‑C‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGAcc > 2:1426987/1‑100 (MQ=255) gATATTCAGCC‑C‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGAcc > 2:137299/1‑100 (MQ=255) gATATTCAGCC‑C‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGAcc > 1:1389848/1‑100 (MQ=255) atatTCAGCC‑C‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCt < 1:2391333/100‑1 (MQ=255) tatTCAGCC‑C‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCTa > 2:1639156/1‑100 (MQ=255) ttCAGCC‑C‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCTACa < 2:1480176/100‑1 (MQ=255) | TCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAG‑C‑C‑CCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCTACA > NC_000913/2866491‑2866682 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |