| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1312264 = | 73 (0.780) | 11 (0.130) | 7/158 | NT | 15.2% | intergenic (‑18/+87) | yciA/yciB | acyl‑CoA esterase/IspA family inner membrane protein |
| ? | NC_000913 | 1312301 = | 58 (0.700) | intergenic (‑55/+50) | yciA/yciB | acyl‑CoA esterase/IspA family inner membrane protein | |||||
GCCGCAGGAAGATAAATCCTAACCAGACTGCCAGTCCTTCGGGGCTGGCGCTGTATCTCCTCTGTTCTCCTCAGGAAAATCATAGTAGCATCGCGCCTGTGATTTTCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1312372‑1312264‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgattttcctGAGGAGAACAGAGGAGATACAGCGCCAGCCCCGAAGGACTGGCAGTCTGGTTAGGATTTATCTTCCTGCGGCATGTGGCGGTAGATATAGATACCGCTT > NC_000913/1312301‑1312399 GCCGCAGGAAGATAAATCCTAACCAGACTGCCAGTCCTTCGGGGCTGGCGCTGTATCTCCTCTGTTCTCCTCAGGAAAATCATAGTAGCATCGCGCCTGT < 1:2231848/100‑1 CCGCAGGAAGATAAATCCTAACCAGACTGCCAGTCCTTCGGGGCTGGCGCTGTATCTCCTCTGTTCTCCTCAGGAAAATCATAGTAGCATCGCGCCTGTG > 2:2536324/1‑100 CGCAGGAAGATAAATCCTGACCAGACTGCCAGTCCGTCGGGGCTGGCGCTGTATCTCCTCTGTTCTCCTCAGGAAAATCATAGTAGCATCGCGCCTGTGA < 2:2134810/100‑1 CGCAGGAAGATAAATCCTAACCAGACTGCCAGTCCTTCGGGGCTGGCGCTGTATCTCCTCTGTTCTCCTCAGGAAAATCATAGTAGCATCGCGCCTGTGA < 2:2483769/100‑1 GCAGGAAGATAGATCCTAACCAGACTGCCAGTCCTTCGGGGCTGGCGCTGTATCTCCTCTGTTCTCCTCAGGAAAATCATAGTAGCATCGCGCCTGTGAT < 2:514123/100‑1 GCAGGAAGATAAATCCTAACCAGACTGCCAGTCCTTCGGGGCTGGCGCTGTATCTCCTCTGTTCTCCTCAGGAAAATCATAGTAGCATCGCGCCTGTGAT < 2:2244816/100‑1 GCAGGAAGATAAATCCTAACCAGACTGCCAGTCCTTCGGGGCTGGCGCTGTATCTCCTCTGTTCTCCTCAGGAAAATCATAGTAGCATCGCGCCTGTGAT < 2:1285668/100‑1 GGAAGATAAATCCTAACCAGACTGCCAGTCCTTCGGGGCTGGCGCTGTATCTCCTCTGTTCTCCTCAGGAAAATCATAGTAGCATCGCGCCTGTGATTTT < 1:2121658/100‑1 GGAAGATAAATCCTAACCAGACTGCCAGTCCTTCGGGGCTGGCGCTGTATCTCCTCTGTTCTCCTCAGGAAAATCATAGTAGCATCGCGCCTGTGATTTT > 2:2541068/1‑100 AGATAAATCCTAACCAGACTGCCAGTCCTTCGGGGCTGGCGCTGTATCTCCTCTGTTCTCCTCAGGAAAATCATAGTAGCATCGCGCCTGTGATTTTCCT < 1:2531766/100‑1 AGATAAATCCTAACCAGACTGCCAGTCCTTCGGGGCTGGCGCTGTATCTCCTCTGTTCTCCTCAGGAAAATCATAGTAGCATCGCGCCTGTGATTTTCCT < 2:1498666/100‑1 AGATAAATCCTAACCAGACTGCCAGTCCTTCGGGGCTGGCGCTGTATCTCCTCTGTTCTCCTCAGGAAAATCATAGTAGCATCGCGCCTGTGATTTTCCT < 2:1313589/100‑1 AAATCCTAACCAGACTGCCAGTCCCTCGGGGCTGGCGCTGTATCTCCTCTGTTCTCCTCAGGAAAAGCATAGTAGCATCGCGCCTGAGATTcccctt < 2:1581122/97‑7 CTGGCGCTGTATCACCTCTGTTCTCCTCAGGAAAATCATAGTAGCATCGCGCCTGTGATTTTCCTGAGGAGAACAGAGGAGATACAGCGCCAGCCCCGAA > 1:1754689/1‑100 TCCTCAGGAAAATCATAGTAGCATCGCGCCTGTGATTTTCCTGAGGAGAACAGAGGAGATACAGCGCCAGCCCCGAAGGACTGGCAGTCTGGTTAGGATT > 1:357844/1‑100 CTCAGGAAAATCATAGTAGCATCGCGCCTGTGATTTTCCTGAGGAGAACAGAGGAGATACAGCGCCAGCCCCGAAGGACTGGCAGTCTGGTTAGGATTTA > 1:467726/1‑100 CTCAGGAAAATCATAGTAGCATCGCGCCTGTGATTTTCCTGAGGAGAACAGAGGAGATACAGCGCCAGCCCCGAAGGACTGGCAGTCTGGTTAGGATTTA > 1:561150/1‑100 TCAGGAAAATCATAGTAGCATCGCGCCTGTGATTTTCCTGAGGAGAACAGAGGAGATACAGCGCCAGCCCCGAAGGACTGGCAGTCTGGTTAGGATTTAT > 2:391150/1‑100 TCAGGAAAATCATAGTAGCATCGCGCCTGTGATTTTCCTGAGGAGAACAGAGGAGATACAGCGCCAGCCCCGAAGGACTGGCAGTCTGGTTAGGATTTAT > 1:2514332/1‑100 CAGGAAAATCATAGTAGCATCGCGCCTGTGATTTTCCTGAGGAGAACAGAGGAGATACAGCGCCAGCCCCGAAGGACTGGCAGTCTGGTTAGGATTTATC > 1:655417/1‑100 CAGGAAAATCATAGTAGCATCGCGCCTGTGATTTTCCTGAGGAGAACAGAGGAGATACAGCGCCAGCCCCGAAGGACTGGCAGTCTGGTTAGGATTTATC > 1:435227/1‑100 AGGAAAATCATAGTAGCATCGCGCCTGTGATTTTGCTGAGGAGAACAGAGGAGATACAGCGCCAGCCCCGGAGGACTGGCAGTCTGGTTAGGATTTAT > 2:2223851/1‑98 AGGAAAATCATAGTAGCATCGCGCCTGTGATTTTCCTGAGGAGAACAGAGGAGATACAGCGCCAGCCCCGAAGGACTGGCAGTCTGGTTAGGATTTATCT > 1:1845327/1‑100 GGAAAATCATAGTAGCATCGCGCCTGTGATTTTCCTGAGGAGAACAGAGGAGATACAGCGCCAGCCCCGAAGGACTGGCAGTCTGGTTAGGATTTATCTT > 1:691569/1‑100 TGATTTTCCTGAGGAGAACAGAGGAGATACAGCGCCAGCCCCGAAGGACTGGCAGTCTGGTTAGGATTTATCTTCCTGCGGCATGTGGCGGTAGATATAG < 2:880184/100‑1 TTTTCCTGAGGAGAACAGATGAGATACAGCGCCAGCCCCGAAGGACTGGCAGTCTGGTTAGGATTTATCTTCCTGCGGCATGTGGCGGTAGATATAGATA > 1:1602929/1‑100 TTTTCCTGAGGAGAACAGAGGAGATACAGCGCCAGCCCCGAAGGACTGGCAGTCTGGTTAGGATTTATCTTCCTGCGGCATGTGGCGGTAGATATAGATA < 1:265502/100‑1 TTTTCCTGAGGAGAACAGAGGAGATACAGCGCCAGCCCCGAAGGACTGGCAGTCTGGTTAGGATTTATCTTCCTGCGGCATGTGGCGGTAGATATAGATA > 1:2455688/1‑100 TTTCCTGAGGCGAACAGTGGAGATACAGCGCCAGCCCCGAAGGACTGGCAGTCTGGGTAGGATTTATCTTCCTGAGGCATGTGGCGGTAGATATAGATA > 2:581488/1‑99 TTCCTGAGGAGAACAGAGGAGATACAGCGCCAGCCCGGAAGGACTGGCAGTCTGGTTAGGATTTATCTTCCTGCGGCATGTGGCGGTAGATATAGATACC < 1:1286253/100‑1 CCTGAGGAGAACAGAGGAGATACAGCGCCAGCCCCGAAGGACTGGCAGTCTGGTTAGGATTTATCTTCCTGCGGCATGTGGCGGTAGATATAGATACCGC < 2:504806/100‑1 CTGAGGAGAACAGAGGAGATACAGCGCCAGCCCCGAAGGACTGGCAGTCTGGTTAGGATTTATCTTCCTGCGGCATGTGGCGGTAGATATAGATACCGCT < 1:52554/100‑1 CTGAGGAGAACAGAGGAGATACAGCGCCAGCCCCGAAGGACTGGCAGTCTGGTTAGGATTTATCTTCCTGCGGCATGTGGCGGTAGATATAGATACCGCT > 1:2558088/1‑100 CTGAGGAGAACAGAGGAGATACAGCGCCAGCCCCGAAGGACTGGCAGTCTGGTTAGGATTTATCTTCCTGCGGCATGTGGCGGTAGATATAGATACCGCT > 1:1779665/1‑100 TGAGGAGAACAGAGGAGATACAGCGCCAGCCCCGAAGGACTGGCAGTCTGGTTAGGATTTATCTTCCTGCGGCATGTGGCGGTAGATATAGATACCGCTT > 1:1635624/1‑100 GCCGCAGGAAGATAAATCCTAACCAGACTGCCAGTCCTTCGGGGCTGGCGCTGTATCTCCTCTGTTCTCCTCAGGAAAATCATAGTAGCATCGCGCCTGTGATTTTCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1312372‑1312264‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgattttcctGAGGAGAACAGAGGAGATACAGCGCCAGCCCCGAAGGACTGGCAGTCTGGTTAGGATTTATCTTCCTGCGGCATGTGGCGGTAGATATAGATACCGCTT > NC_000913/1312301‑1312399 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |