New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 792267NA (NA)7 (0.080) 5/164 NT NA noncoding (4/34 nt) REP71 (repetitive extragenic palindromic) element; contains 1 REP sequences REP71 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 = 792297 NA (NA)noncoding (34/34 nt) REP71 (repetitive extragenic palindromic) element; contains 1 REP sequences REP71 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 104 total aligned reads displayed.

TATGCGCGATTAAGTGATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAA  >  NC_000913/792168‑792366
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tATGCGCGATTAAGTGATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTg                                                                                                     <  1:2067968/100‑1 (MQ=255)
  tGCGCGATTAAGTGATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGgc                                                                                                   <  2:1267004‑M1/100‑3 (MQ=255)
  tGCGCGATTAAGTGATTATAAAACAGAGGGTTTATGAAGGATTGCGCTTTTTATCTGATAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGgc                                                                                                   <  2:1420641‑M1/100‑3 (MQ=255)
   gcgcGATTAAGTGATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGgcc                                                                                                  <  1:2417465‑M1/100‑4 (MQ=255)
    cgcgATTAAGTGATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGgccg                                                                                                 >  2:2037713‑M1/1‑96 (MQ=255)
     gcgATTAAGTGATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGgccgg                                                                                                <  1:748289‑M1/100‑6 (MQ=255)
      cgATTAAGTGATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGgccgga                                                                                               <  1:842557‑M1/100‑7 (MQ=255)
      cgATTAAGTGATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGgccgga                                                                                               >  1:2236586‑M1/1‑94 (MQ=255)
           aaGTGATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAggg                                                                                          <  1:952883/100‑1 (MQ=255)
           aaGTGATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAggg                                                                                          >  1:2190701/1‑100 (MQ=255)
            aGTGATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAggg                                                                                          >  1:2477733/1‑99 (MQ=255)
            aGTGATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATATGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGt                                                                                         >  2:189072/1‑100 (MQ=255)
             gTGATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTg                                                                                        >  1:342448/1‑100 (MQ=255)
              tGATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGc                                                                                       <  1:2122133/100‑1 (MQ=255)
               gATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCt                                                                                      >  2:2314894/1‑100 (MQ=255)
                aTTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTa                                                                                     <  2:1014113/100‑1 (MQ=255)
                 ttATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTaa                                                                                    >  2:2499464/1‑100 (MQ=255)
                   ataAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTaa                                                                                    >  2:2349037/1‑98 (MQ=255)
                   ataAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAgg                                                                                  >  1:812075/1‑100 (MQ=255)
                   ataAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAgg                                                                                  <  2:196095/100‑1 (MQ=255)
                      aaaCAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGgccg                                                                               >  2:1881167/1‑100 (MQ=255)
                       aaCAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGgccgc                                                                              >  1:415675/1‑100 (MQ=255)
                        aCAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCC                                                                             >  1:696948‑M2/1‑100 (MQ=255)
                         cAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCT                                                                            <  2:784553‑M2/100‑1 (MQ=255)
                             gggTTTAGGAAAGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGG                                                                        <  2:1363093‑M2/100‑1 (MQ=255)
                              ggTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGgccggaggcggccttagcaccctctccggc                                                                       <  2:443017‑M1/100‑31 (MQ=255)
                              ggTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGgccggaggcggccttagcaccctctccggc                                                                       <  1:2278822‑M1/100‑31 (MQ=255)
                              ggTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGC                                                                       >  1:1844552‑M2/1‑100 (MQ=255)
                               gTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCa                                                                      >  2:1683842/1‑100 (MQ=255)
                               gTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCa                                                                      >  1:932057/1‑100 (MQ=255)
                                 ttATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAg                                                                    <  1:2314907/100‑1 (MQ=255)
                                 ttATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAg                                                                    <  1:1231419/100‑1 (MQ=255)
                                  tATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTTGCCGGAGATGGTGCTAAGGCCGCCTACGGCAAgg                                                                   <  2:755689/100‑1 (MQ=255)
                                  tATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGgccggaggcggccttagcaccctctccggccaac                                                                   <  2:791994‑M1/100‑35 (MQ=255)
                                  tATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGgccggaggcggccttagcaccctctccggccaac                                                                   <  1:740796‑M1/100‑35 (MQ=255)
                                  tATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAgg                                                                   <  2:281227/100‑1 (MQ=255)
                                  tATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAgg                                                                   <  2:519077/100‑1 (MQ=255)
                                   atgaatgaTTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGgccggaggcggccttagcaccctctccggccaacg                                                                  <  1:1039875‑M1/100‑36 (MQ=255)
                                   atgaatgaTTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGt                                                                  <  1:133427/100‑1 (MQ=255)
                                   atgaatgaTTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGt                                                                  <  2:2435745/100‑1 (MQ=255)
                                    tgaatgaTTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTc                                                                 >  1:694725/1‑100 (MQ=255)
                                     gaatgaTTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCa                                                                >  2:1210902/1‑100 (MQ=255)
                                     gaatgaTTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCa                                                                >  2:2043179/1‑100 (MQ=255)
                                       atgaTTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGgccggaggcggccttagcaccctctccggccaacggttc                                                              <  1:1173945‑M1/100‑40 (MQ=255)
                                        ttaTTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTTCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCa                                                             <  2:1821103/98‑1 (MQ=255)
                                         gaTTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCAc                                                            <  1:1012787/100‑1 (MQ=255)
                                         gaTTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCAc                                                            <  1:432525/100‑1 (MQ=255)
                                            tGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTAc                                                         >  2:2314481/1‑100 (MQ=255)
                                             gcgcTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTAcc                                                        <  2:421070/100‑1 (MQ=255)
                                             gcgcTGTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTAcc                                                        <  2:1649197/100‑1 (MQ=255)
                                               gcTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGa                                                      >  2:1855439/1‑100 (MQ=255)
                                                 tttttATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACt                                                    <  1:2003355/100‑1 (MQ=255)
                                                 tttttATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACt                                                    <  1:2376969/100‑1 (MQ=255)
                                                   tttATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCa                                                  <  1:973962/100‑1 (MQ=255)
                                                     tATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAat                                                >  2:411009/1‑100 (MQ=255)
                                                     tATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAat                                                <  1:2395312/100‑1 (MQ=255)
                                                      aTCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAata                                               >  1:1366033/1‑100 (MQ=255)
                                                        cTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCTCTACCGACTCAatata                                             >  2:1728654/1‑100 (MQ=255)
                                                        cTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAatata                                             >  1:2376630/1‑100 (MQ=255)
                                                        cTGAAAAAAGACGCGGTTTCATGCCTGCATGCGGCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCaa                                                 >  2:1720237/1‑96 (MQ=255)
                                                          gAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGgccggaggcggccttagcaccctctccggccaacggttcgacgcatgcaggcatgaaa                                           <  1:1749862‑M1/100‑59 (MQ=255)
                                                          gAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATAtt                                           >  1:1684894/1‑100 (MQ=255)
                                                            aaaaaGACGCGGTTTCATGCCTGCAGGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATAtttt                                         <  2:2261862/100‑1 (MQ=255)
                                                             aaaaGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATAttttt                                        <  1:295432/100‑1 (MQ=255)
                                                             aaaaGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCAGCAAGGTCAGCACTACCGACTCAATATAttttt                                        >  1:1929771/1‑100 (MQ=255)
                                                              aaaGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTg                                       <  2:2178985/100‑1 (MQ=255)
                                                              aaaGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTg                                       <  2:1921757/100‑1 (MQ=255)
                                                               aaGACGCGGTTTGATGCCTGCATGCGTCGAACCGTTGGCCGGAGCGGGCGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTga                                      >  2:1214260/1‑99 (MQ=255)
                                                                  aCGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAg                                   <  2:1235905/100‑1 (MQ=255)
                                                                  aCGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAg                                   <  1:2043190/100‑1 (MQ=255)
                                                                    gcgGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGca                                 <  1:489254/100‑1 (MQ=255)
                                                                     cgGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGcac                                <  2:2051521/100‑1 (MQ=255)
                                                                      ggTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGcaca                               <  1:1350153/100‑1 (MQ=255)
                                                                       gTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACAt                              <  1:1804267/100‑1 (MQ=255)
                                                                        tttCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCcaacggttcgacgcatgcaggcatgaaaccgcgtcttttttc                             <  1:1749862‑M2/100‑43 (MQ=255)
                                                                        tttCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATa                             <  1:2191642/100‑1 (MQ=255)
                                                                           cATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCg                          <  1:2236404/100‑1 (MQ=255)
                                                                           cATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCg                          >  2:2236391/1‑100 (MQ=255)
                                                                            aTGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGc                           <  2:1071399/98‑1 (MQ=255)
                                                                             tGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCGTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGAt                        >  2:1445685/1‑100 (MQ=255)
                                                                             tGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGCCTCAATATATTTTTGTCAGCACATAGCGa                         >  2:719614/1‑99 (MQ=255)
                                                                             tGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGAt                        >  1:1734308/1‑100 (MQ=255)
                                                                              gCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTCAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATa                       >  2:204/1‑100 (MQ=255)
                                                                                 tGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATagag                    <  1:1003123/100‑1 (MQ=255)
                                                                                 tGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATagag                    <  1:1322304/100‑1 (MQ=255)
                                                                                   cATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTc                  <  2:2536723/100‑1 (MQ=255)
                                                                                   cATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTc                  <  1:1300350/100‑1 (MQ=255)
                                                                                   cATGCGTCGAACCGTTGGCCGGAGAGCGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTc                  >  1:1583018/1‑100 (MQ=255)
                                                                                     tGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCa                >  2:678127/1‑100 (MQ=255)
                                                                                           gAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCcaacggttcgacgcatgcaggcatgaaaccgcgtcttttttcagataaaaagcgcaatcat          <  1:1173945‑M2/100‑62 (MQ=255)
                                                                                           gAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTcc          <  1:2395085/100‑1 (MQ=255)
                                                                                           gAACCGTTGGCCGGACAGGGTGCTAAGGCCGCCTCCGGCACGGTCAGCACGACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTcc          >  2:1283073/1‑100 (MQ=255)
                                                                                              ccGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGc       <  2:1794887/100‑1 (MQ=255)
                                                                                              ccGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGc       >  1:915421/1‑100 (MQ=255)
                                                                                               cGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCcaacggttcgacgcatgcaggcatgaaaccgcgtcttttttcagataaaaagcgcaatcattcat      <  1:1039875‑M2/100‑66 (MQ=255)
                                                                                               cGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACGGTCCGGCa      >  1:1895981/1‑100 (MQ=255)
                                                                                                gTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCcaacggttcgacgcatgcaggcatgaaaccgcgtcttttttcagataaaaagcgcaatcattcata     <  2:791994‑M2/100‑67 (MQ=255)
                                                                                                gTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCcaacggttcgacgcatgcaggcatgaaaccgcgtcttttttcagataaaaagcgcaatcattcata     <  1:740796‑M2/100‑67 (MQ=255)
                                                                                                 ttGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACg    <  1:355105/100‑1 (MQ=255)
                                                                                                   ggCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGaa  >  1:479625/1‑100 (MQ=255)
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TATGCGCGATTAAGTGATTATAAAACAGAGGGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAA  >  NC_000913/792168‑792366

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.