New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 72169 =NA (NA)7 (0.080) 4/164 NT NA noncoding (34/85 nt) REP7 (repetitive extragenic palindromic) element; contains 2 REP sequences REP7 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 3296999 = NA (NA)noncoding (1/84 nt) REP240 (repetitive extragenic palindromic) element; contains 2 REP sequences REP240 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 154 total aligned reads displayed.

ACGTGAAGCGAAAGCGGCGGCAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGTTTTCCCTCAAAT  >  NC_000913/3296900‑3297098
                                                                                                   |                                                                                                   
aaggcgagtgcttcggcactattggggattacgggttagtatgcactgtcggatgcggcgtgaacgccttatccgacctacgggtagtgcgttttgtagg                                                                                                     <  1:1198543‑M2/1‑1 (MQ=255)
aaggcgagtgcttcggcactattggggattacgggttagtatgcactgtcggatgcggcgtgaacgccttatccgacctacgggtagtgcgttttgtagg                                                                                                     <  1:1198807‑M2/1‑1 (MQ=255)
aaggcgagtgcttcggcactattggggattacgggttagtatgcactgtcggatgcggcgtgaacgccttatccgacctacgggtagtgcgttttgtagg                                                                                                     <  1:2229626‑M2/1‑1 (MQ=255)
aaggcgagtgcttcggcactattggggattacgggttagtatgcactgtcggatgcggcgtgaacgccttatccgacctacgggtagtgcgttttgtagg                                                                                                     <  2:374981‑M2/1‑1 (MQ=255)
aCGTGAAGCGAAAGCGGCGGCAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATg                                                                                                     <  1:1704901/100‑1 (MQ=255)
 cGTGAAGCGAAAGCGGCGGCAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGc                                                                                                    >  1:471086/1‑100 (MQ=255)
 cGTGAAGCGAAAGCGGCGGCAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGc                                                                                                    >  2:1144879/1‑100 (MQ=255)
  ggcgagtgcttcggcactattggggattacgggttagtatgcactgtcggatgcggcgtgaacgccttatccgacctacgggtagtgcgttttgtagGcc                                                                                                   >  1:2349510‑M2/98‑100 (MQ=255)
  ggcgagtgcttcggcactattggggattacgggttagtatgaactgtcggatgcggcgtgaacgccttatccgacctacgggtagtgcgttttgtagGcc                                                                                                   <  1:1417386‑M2/3‑1 (MQ=255)
  gTGAAGCGAAAGCGGCGGCAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGcc                                                                                                   >  1:2051068/1‑100 (MQ=255)
  gTGAAGCGAAAGCGGCGGCAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGcc                                                                                                   <  1:865256/100‑1 (MQ=255)
  gTGAAGCGAAAGCGGCGGCAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGcc                                                                                                   >  1:1704953/1‑100 (MQ=255)
   tGAAGCGAAAGCGGCGGCAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCt                                                                                                  <  2:120740/100‑1 (MQ=255)
   tGAAGCGAAAGCGGCGGCAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCt                                                                                                  >  1:209382/1‑100 (MQ=255)
   tGAAGCGAAAGCGGCGGCAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCt                                                                                                  <  1:1315982/100‑1 (MQ=255)
   tGAAGCGAAAGCGGCGGCAGATATTGCCAGCCGGGTGAGCGGCCTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCt                                                                                                  <  2:1670009/100‑1 (MQ=255)
   gcgagtgcttcggcactattggggattacgggttagtatgcactgtcggatgcggcgtgaacgccttatccgacctacgggtagtgcgttttgtagGCCt                                                                                                  <  1:671724‑M2/4‑1 (MQ=255)
    gAAGCGAAAGCGGCGGCAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTg                                                                                                 >  1:422026/1‑100 (MQ=255)
    gAAGCGAAAGCGGCGGCAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTg                                                                                                 <  1:1878878/100‑1 (MQ=255)
    gAAGCGAAAGCGGCGGCAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTg                                                                                                 >  1:782007/1‑100 (MQ=255)
    gAAGCGAAAGCGGCGGCAGATATTGCCAGCCGGGTGAGCGGCGGGAAGCGGGTAACTACGGCGTCTACGTCTATTAAATAGCAGCCCCTTGTAAAGCCt                                                                                                  >  2:851148/1‑99 (MQ=255)
    cgagtgcttcggcactattggggattaggggttagtatgcactgtcggatgcggcgtgaacgccttatccgacctacgggtagtgcgttttttagGCCTg                                                                                                 >  2:779971‑M2/96‑100 (MQ=255)
     gagtgcttcggcactattggggattacgggttagtatgcactgtcggatgcggcgtgaacgccttatccgacctacgggtagtgcgttttgtagGCCTGa                                                                                                >  2:388295‑M2/95‑100 (MQ=255)
      aGCGAAAGCGGCGGCAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACTGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTggt                                                                                               <  1:1760125/100‑3 (MQ=255)
      aGCGAAAGCGGCGGCAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATATCAGCCCCTTGTAATGCCTGAt                                                                                               <  2:178531/100‑1 (MQ=255)
      aGCGAAAGCGGCGGCAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGAt                                                                                               <  2:2306850/100‑1 (MQ=255)
       gCGAAAGCGGCGGCAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATg                                                                                              <  2:2082171/100‑1 (MQ=255)
        cGAAAGCGGCGGCAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGc                                                                                             <  1:875321/100‑1 (MQ=255)
        cGAAAGCGGCGGCAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGc                                                                                             <  1:2430123/100‑1 (MQ=255)
         gAAAGCGGCGGCAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCg                                                                                            >  2:1072342/1‑100 (MQ=255)
            aGCGGCGGCAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACg                                                                                         <  1:1110518/100‑1 (MQ=255)
            aGCGGCGGCAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACg                                                                                         <  1:1735839/100‑1 (MQ=255)
             gcggcgGCAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGTGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACg                                                                                         <  2:1462049/99‑1 (MQ=255)
               ggcggcAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCtt                                                                                      >  1:1824352/1‑100 (MQ=255)
               ggcggcAAAAATTTCCGAGCGGGTGGGGGGCGTGAAGCCGGTAAACACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCtt                                                                                      <  1:2252040/100‑1 (MQ=255)
                 cggcAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGc                                                                                    <  1:336578/100‑1 (MQ=255)
                  ggcAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGcc                                                                                   <  1:2403360/100‑1 (MQ=255)
                     aGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCcgcg                                                                                <  1:2306450/100‑1 (MQ=255)
                     aGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCcgcg                                                                                <  1:638952/100‑1 (MQ=255)
                       atatTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGCTGCGACGCTTGCCGCGTc                                                                              >  2:1059124/1‑100 (MQ=255)
                       atatTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTc                                                                              <  1:2187269/100‑1 (MQ=255)
                         atTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTATGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTc                                                                              <  2:1635643/98‑1 (MQ=255)
                         atTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCtt                                                                            <  2:168854/100‑1 (MQ=255)
                           tGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTAt                                                                          >  2:930051/1‑100 (MQ=255)
                           tGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTAt                                                                          >  1:1872351/1‑100 (MQ=255)
                           tGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTAt                                                                          >  1:675522/1‑100 (MQ=255)
                            gCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATc                                                                         >  1:1505673/1‑100 (MQ=255)
                            gCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATc                                                                         >  2:528796/1‑100 (MQ=255)
                             tacgggttagtatgcactgtcggatgcggcgtgaacgccttatccgacctacgggtagtgcgttttgtagGCCTGATGCGACGCTTGCCGCGTCTTATCa                                                                        <  1:314031‑M2/30‑1 (MQ=255)
                             tacgggttagtatgcactgtcggatgcggcgtgaacgccttatccgacctacgggtagtgcgttttgtagGCCTGATGCGACGCTTGCCGCGTCTTATCa                                                                        <  1:388299‑M2/30‑1 (MQ=255)
                               aGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAgg                                                                      <  1:1546696/100‑1 (MQ=255)
                                gggttagtatgcactgtcggatgcggcgtgaacgccttatccgacctacgggtagtgcgttttgtagGCCTGATGCGACGCTTGCCGCGTCTTATCAGGc                                                                     <  1:2199365‑M2/33‑1 (MQ=255)
                                 ggttagtatgcactgtcggatgcggcgtgaacgccttatccgacctacgggtagtgcgttttgtagGCCTGATGCGACGCTTGCCGCGTCTTATCAGGcc                                                                    <  2:2315775‑M2/34‑1 (MQ=255)
                                 ggttagtatgcactgtcggatgcggcgtgaacgccttatccgacctacgggtagtgcgttttgtagGCCTGATGCGACGCTTGCCGCGTCTTATCAGGcc                                                                    <  1:542831‑M2/34‑1 (MQ=255)
                                  cGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCt                                                                   >  2:1624656/1‑100 (MQ=255)
                                    tagtatgcactgtcggatgcggcgtgaacgccttatccgacctacgggtagtgcgttttgtagGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTAc                                                                 <  1:1588369‑M2/37‑1 (MQ=255)
                                         gcggcgTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGa                                                            >  2:187609/1‑100 (MQ=255)
                                          cggcgTGAAGCGGGTCACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGAt                                                           <  1:2558037/100‑1 (MQ=255)
                                             cgTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACa                                                        <  2:726831/100‑1 (MQ=255)
                                              gTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACaa                                                       >  2:1900272/1‑100 (MQ=255)
                                                gAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAAc                                                     >  2:708320/1‑100 (MQ=255)
                                                 aaGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAAcc                                                    <  1:1692623/100‑1 (MQ=255)
                                                  aGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCg                                                   >  2:1802035/1‑100 (MQ=255)
                                                    cGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTa                                                 >  2:2381792/1‑100 (MQ=255)
                                                      ggTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAgg                                               <  1:1020413/100‑1 (MQ=255)
                                                       gTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGt                                              >  2:2015884/1‑100 (MQ=255)
                                                        tAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTc                                             <  2:321825/100‑1 (MQ=255)
                                                            tACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGAt                                         >  2:2209363/1‑100 (MQ=255)
                                                            tACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGAt                                         >  2:1466486/1‑100 (MQ=255)
                                                            tACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGAt                                         <  1:605135/100‑1 (MQ=255)
                                                              cGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAATCGTAGGTCAGATaa                                       >  2:184771/1‑100 (MQ=255)
                                                                            attaAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTAcgccgc                         >  2:2392770/1‑100 (MQ=255)
                                                                            attaAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTAcgccgc                         >  2:721633/1‑100 (MQ=255)
                                                                            attaAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTAcgccgc                         <  2:1451595/100‑1 (MQ=255)
                                                                            attaAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCATTTAcgccgc                         >  2:1705240/1‑100 (MQ=255)
                                                                              taAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGCAGGTCAGATAAGGCGTTCACGCCGCAt                       >  2:2418413/1‑100 (MQ=255)
                                                                                aaTAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCAccc                     <  2:1224622/100‑1 (MQ=255)
                                                                                 aTAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCg                    <  1:366155/100‑1 (MQ=255)
                                                                                  tAGCAGCCCCTTTTTATGCCTGATGCGACGCTTGCCGCGTCTTATCAGACCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGa                   <  2:692219/100‑1 (MQ=255)
                                                                                  tAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCg                    >  2:1514065/1‑99 (MQ=255)
                                                                                    gcagcCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCATATAAGGCGTTTACGCCGCATCCgc                   >  2:2462948/1‑97 (MQ=255)
                                                                                    gcagcCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACa                 >  1:1480994/1‑100 (MQ=255)
                                                                                     cagcCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACa                 <  1:971831/99‑1 (MQ=255)
                                                                                           cTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTCTCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGTTTTc          <  2:1373175/100‑1 (MQ=255)
                                                                                           cTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCATGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGTTTTc          <  1:758163/100‑1 (MQ=255)
                                                                                           cTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGTTTTc          <  1:702413/100‑1 (MQ=255)
                                                                                           cTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGTTTTc          <  2:2156418/100‑1 (MQ=255)
                                                                                             tGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGTTTTccc        >  1:168469/1‑100 (MQ=255)
                                                                                             tGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGTTTTccc        <  1:565701/100‑1 (MQ=255)
                                                                                             tGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGTTTTccc        <  1:2132543/100‑1 (MQ=255)
                                                                                              gTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGACCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGTTTTCCCt       <  1:1829142/100‑1 (MQ=255)
                                                                                               tAATGCCTTATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGTTTTCCCTc      <  2:600571/100‑1 (MQ=255)
                                                                                               tAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACATACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGTTTTCCCTc      <  2:2214811/100‑1 (MQ=255)
                                                                                               tAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGTTTTCCCTc      <  1:1625087/100‑1 (MQ=255)
                                                                                               tAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGTTTTCCCTc      >  2:1357182/1‑100 (MQ=255)
                                                                                               tAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGTTTTCCCTc      <  1:2089908/100‑1 (MQ=255)
                                                                                                 aTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGTTTTCCCTCaa    <  1:1943090/100‑1 (MQ=255)
                                                                                                  tGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGTTTTCCCTCaaa   >  2:1820297/1‑100 (MQ=255)
                                                                                                   GCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGTTTTCCCTCAAAt  <  2:1069656‑M2/100‑1 (MQ=255)
                                                                                                   GCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGTTTTCCCTCAAAt  >  1:975011‑M2/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
ACGTGAAGCGAAAGCGGCGGCAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAGCAGCCCCTTGTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAACGATACAAACCGTAGGTCAGATAAGGCGTTTACGCCGCATCCGACATGTTTTCCCTCAAAT  >  NC_000913/3296900‑3297098

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.