New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 30362976 (0.810)15 (0.190) 8/152 NT 17.8% intergenic (+24/+224) yagU/ykgJ DUF1440 family inner membrane acid resistance protein/UPF0153 cysteine cluster protein
?NC_000913 = 303636 74 (0.930)intergenic (+31/+217) yagU/ykgJ DUF1440 family inner membrane acid resistance protein/UPF0153 cysteine cluster protein

Only 100 of 117 total aligned reads displayed.

CGCAGAGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGATGATGTAGATCCGAAGAA  >  NC_000913/303537‑303734
                                                                                                   |                                                                                                  
cGCAGAGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATAGCGCAAATACa                                                                                                    >  1:583702/1‑100 (MQ=255)
 gCAGAGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAg                                                                                                   <  1:2404382‑M2/100‑2 (MQ=255)
 gCAGAGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAg                                                                                                   <  2:2513960‑M2/100‑2 (MQ=255)
  cAGAGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAgc                                                                                                  <  2:1938464‑M2/100‑3 (MQ=255)
      gaTTTACGAAACAGAATTACTTATGAGCCAGACCCTGAGATCTCTGTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAgcgcca                                                                                              <  2:2442027‑M2/100‑7 (MQ=255)
      gaTTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAgcgcca                                                                                              <  2:2143245‑M2/100‑7 (MQ=255)
        tttACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAgcgccatt                                                                                            <  2:2007553‑M2/100‑9 (MQ=255)
         ttACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAgcgccattt                                                                                           >  2:1853224‑M2/1‑91 (MQ=255)
         ttACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAgcgccattt                                                                                           >  2:1853206‑M2/1‑91 (MQ=255)
         ttACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAgcgccattt                                                                                           <  1:1009441‑M2/100‑10 (MQ=255)
            cGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAgcgccattttta                                                                                        >  2:342649‑M2/1‑88 (MQ=255)
            cGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAgcgccattttta                                                                                        >  1:401846‑M2/1‑88 (MQ=255)
             gAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAgcgccatttttat                                                                                       <  1:353491‑M2/100‑14 (MQ=255)
              aaaCAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTtata                                                                                      <  2:1478959/100‑1 (MQ=255)
               aaCAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAg                                                                                     <  2:1767908/100‑1 (MQ=255)
                aCAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAgg                                                                                    <  2:1919261/100‑1 (MQ=255)
                aCAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAgg                                                                                    <  1:829586/100‑1 (MQ=255)
                   gAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTa                                                                                 <  1:983504/100‑1 (MQ=255)
                         cTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACa                                                                           >  1:638141/1‑100 (MQ=255)
                         cTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACa                                                                           >  2:158808/1‑100 (MQ=255)
                         cTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACa                                                                           >  2:1045935/1‑100 (MQ=255)
                         cTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACa                                                                           <  2:1304079/100‑1 (MQ=255)
                          tCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACAt                                                                          <  1:1184669/100‑1 (MQ=255)
                            aTGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTg                                                                        >  1:183971/1‑100 (MQ=255)
                            aTGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTg                                                                        >  2:1738947/1‑100 (MQ=255)
                                gCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCttt                                                                    >  1:1662555/1‑100 (MQ=255)
                                gCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCttt                                                                    >  2:491336/1‑100 (MQ=255)
                                gCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCttt                                                                    >  1:2373701/1‑100 (MQ=255)
                                gCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCtt                                                                     >  1:388950/1‑99 (MQ=255)
                                   aGACCCTTAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCTAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTta                                                                 <  2:91544/100‑1 (MQ=255)
                                      cccTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTatat                                                              >  1:2302627/1‑100 (MQ=255)
                                      cccTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTatat                                                              >  1:779441/1‑100 (MQ=255)
                                        ctaagaTGCCTATATGCTCAAACAGATCAACCATTGCATGCTAAAAATGGCGCAAACCGCGCGCCACGTGCATAGCTCAAAAACATTGCTGTTtatgat                                                             >  2:519785/4‑96 (MQ=255)
                                        cTGAGATCCCTTTAGGCTCAAACAGATAATGCATTAAATGATAAAAATGGCGCAAATACAGCGCCATTAAAAAAAAAAAAAAACATTGCTTTTTATATTc                                                            <  2:2412783/100‑1 (MQ=255)
                                         tGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCt                                                           >  2:128513/1‑100 (MQ=255)
                                         tGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCt                                                           >  2:2001038/1‑100 (MQ=255)
                                          gagaTCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTg                                                          <  1:1592133/100‑1 (MQ=255)
                                            gacgtggttATGCGCAAAATGATTATACATTGAATGATAAAAATGGCACAATTACTGAGCCATTTTCAGAGGTCAAAAACATTGCTTTTTATATTCTGaa                                                        <  2:2484342/93‑2 (MQ=255)
                                            gaTCCCTTTAGGCTCAAACAGATAATGCAGTGAATGATAAAAATGTCTCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGa                                                         <  1:104948/99‑1 (MQ=255)
                                             aTCCCTTTAGGCTCAAACAGATAATGCATTTAATAATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAACCATTGCTTTTTATATTCTGac                                                        <  2:2385003/99‑2 (MQ=255)
                                             aTCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATg                                                       >  1:2149334/1‑100 (MQ=255)
                                             aTCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATg                                                       <  1:754694/100‑1 (MQ=255)
                                               cccTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCa                                                     >  1:1194772/1‑100 (MQ=255)
                                                ccTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAg                                                    <  2:1805586/100‑1 (MQ=255)
                                                ccTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAg                                                    <  1:399945/100‑1 (MQ=255)
                                                    tAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAg                                                <  2:2095969/100‑1 (MQ=255)
                                                    tAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAg                                                <  2:1440289/100‑1 (MQ=255)
                                                      ggCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTc                                              >  2:2382101/1‑100 (MQ=255)
                                                      ggCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTc                                              >  1:1342701/1‑100 (MQ=255)
                                                      ggCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTc                                              >  1:2007328/1‑100 (MQ=255)
                                                      ggCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTc                                              >  1:2236875/1‑100 (MQ=255)
                                                       gCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCa                                             <  2:776037/100‑1 (MQ=255)
                                                       gCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCa                                             >  1:2445707/1‑100 (MQ=255)
                                                         tCAAACAGCTAATGCATTGAATGATAAAAATGACGCAAATACAGAGCCATTTTTATAGGTTAAAAACCTTGCTCTTTATATTCTGATGCAGATAATCAg                                            >  2:530234/1‑99 (MQ=255)
                                                         tCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGt                                           <  1:860610/100‑1 (MQ=255)
                                                          cAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTg                                          >  2:266303/1‑100 (MQ=255)
                                                            aaCAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAg                                        <  1:132610/100‑1 (MQ=255)
                                                             aCAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGt                                       <  1:2130380/100‑1 (MQ=255)
                                                               aGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGtat                                     >  1:794454/1‑100 (MQ=255)
                                                                  tAATGCATTGAATGATAAAAATGGCGCAAATACAgcgccatttttatcattcaatgcattatctgtttgagcctaaagggatctcagggtctggctcatg                                  <  1:2030822‑M2/100‑67 (MQ=255)
                                                                   aaTGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATcg                                 >  1:6184/1‑100 (MQ=255)
                                                                    aTGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATcg                                 >  2:1459457/1‑99 (MQ=255)
                                                                     tGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATcgcg                               <  1:2249935/100‑1 (MQ=255)
                                                                        aTTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTa                            >  2:847337/1‑100 (MQ=255)
                                                                        aTTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTa                            <  2:574227/100‑1 (MQ=255)
                                                                         ttGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTAc                           >  1:2315112/1‑100 (MQ=255)
                                                                          tGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACt                          <  2:2561777/100‑1 (MQ=255)
                                                                            aaTGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTc                        >  2:867665/1‑100 (MQ=255)
                                                                             aTGATAAAAATGGCGCAAATACAgcgccatttttatcattccatgcattatctgtttgagcctaaagggatctcagggtctggctcatgagtaattctgt                       <  1:654772‑M2/100‑78 (MQ=255)
                                                                             aTGATAAAAATGGCGCAAATACAgcgccatttttatcattcaatgcattatctgtttgagcctaaagggatctcagggtctggctcatgagtaattctgt                       <  1:2137470‑M2/100‑78 (MQ=255)
                                                                             aTGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCa                       >  1:1453564/1‑100 (MQ=255)
                                                                             aTGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAATCAGTGAGTATATCGTGCTACtt                         >  2:642033/1‑98 (MQ=255)
                                                                              tGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAg                      >  2:196637/1‑100 (MQ=255)
                                                                              tGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAg                      <  1:2149957/100‑1 (MQ=255)
                                                                               gATAAAAATGGCGCAAATACAgcgccatttttatcattcaatgcattatctgtttgagcctaaagggatctcagggtctggctcatgagtaattctgttt                     <  2:1935411‑M2/100‑80 (MQ=255)
                                                                               gATAAAAATGGCGCAAATACAgcgccatttttatcattcaatgcattatctgtttgagcctaaagggatctcagggtctggctcatgagtaattctgttt                     <  2:1875112‑M2/100‑80 (MQ=255)
                                                                               gATAAAAATGGCGCAAATACAgcgccatttttatcattcaatgcattatctgtttgagcctaaagggatctcagggtctggctcatgagtaattctgttt                     <  1:1399435‑M2/100‑80 (MQ=255)
                                                                               gATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCa                       >  2:1159683/1‑98 (MQ=255)
                                                                               gATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAgg                     <  2:284451/100‑1 (MQ=255)
                                                                                aTAAAAATGGCGTAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGCCAGTGAGTATATCgcgcagatcggaag                    >  1:1714792/1‑90 (MQ=255)
                                                                                aTAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGga                    >  2:1379490/1‑100 (MQ=255)
                                                                                aTAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGga                    <  2:2149322/100‑1 (MQ=255)
                                                                                 tAAAAATGGCGCAAATACAgcgccatttttatcattcaatgcattatctgtttgagcctaaagggatctcagggtctggctcatgagtaattctgtttc                    <  2:348971‑M2/99‑81 (MQ=255)
                                                                                  aaaaaTGGCGCAAATACAgcgccatttttatcattcaatgcattatctgtttgagcctaaagggatctcagggtctggctcatgagtaattctgtttcgt                  <  1:2517373‑M2/100‑83 (MQ=255)
                                                                                  aaaaaTGGCGCAAATACAgcgccatttttatcattcaatgcattatctgtttgagcctaaagggatctcagggtctggctcatgagtaattctgtttcgt                  <  1:1865699‑M2/100‑83 (MQ=255)
                                                                                  aaaaaTGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGgatg                  >  1:1455806/1‑100 (MQ=255)
                                                                                  aaaaaTGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGgatg                  >  1:1378415/1‑100 (MQ=255)
                                                                                   aaaaTGGCGCAAATACAgcgccatttttatcattcaatgcattatctgtttgagcctaaagggatctcagggtctggctcatgagtaattctgtttcgta                 <  1:1415497‑M2/100‑84 (MQ=255)
                                                                                   aaaaTGGCGCAAATACAgcgccatttttatcattcaatgcattatctgtttgagcctaaagggatctcagggtctggctcatgagtaattctgtttcgta                 <  2:758349‑M2/100‑84 (MQ=255)
                                                                                   aaaaTGGCGCAAATACAgcgccatttttatcattcaatgcattatctgtttgagcctaaagggatctcagggtctggctcatgagtaattctgtttcgta                 <  1:1593558‑M2/100‑84 (MQ=255)
                                                                                   aaaaTGGCGCAAATACAgcgccatttttatcattcaatgcattatctgtttgagcctaaagggatctcagggtctggctcatgagtaattctgtttcgta                 <  2:2080083‑M2/100‑84 (MQ=255)
                                                                                          cgcAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGATGATGTAGAt          >  1:435803/1‑100 (MQ=255)
                                                                                           gcAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGATGATGTAGATc         >  2:1383624/1‑100 (MQ=255)
                                                                                            cAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGATGATGTAGATcc        >  2:659563/1‑100 (MQ=255)
                                                                                              aaTACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGATGATGTAGATCCga      >  1:1395451/1‑100 (MQ=255)
                                                                                               aTACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGATGATGTAGATCCgaa     <  1:439739/100‑1 (MQ=255)
                                                                                                tACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGATGATGTAGATCCgaag    >  2:2085609/1‑100 (MQ=255)
                                                                                                tACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGATGATGTAGATCCgaag    <  2:2323318/100‑1 (MQ=255)
                                                                                                tACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCACTACTTCAGGATGATGTAGATCCgaag    <  1:826541/100‑1 (MQ=255)
                                                                                                  cAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGATGATGTAGATCCgaagaa  <  2:2180804/100‑1 (MQ=255)
                                                                                                   |                                                                                                  
CGCAGAGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGATGATGTAGATCCGAAGAA  >  NC_000913/303537‑303734

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.