New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 349938NA (NA)11 (0.130) 4/164 NT NA noncoding (334/365 nt) REP25 (repetitive extragenic palindromic) element; contains 8 REP sequences REP25 (repetitive extragenic palindromic) element; contains 8 REP sequences
?NC_000913 = 349969 NA (NA)noncoding (365/365 nt) REP25 (repetitive extragenic palindromic) element; contains 8 REP sequences REP25 (repetitive extragenic palindromic) element; contains 8 REP sequences

Only 100 of 143 total aligned reads displayed.

ATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGACAACATGAGCGACACAACGATCCTGCAAAACAGTACCCATGTCATTAAACCGAAAAAATCT  >  NC_000913/349870‑350068
                                                                                                   |                                                                                                   
tctcgacAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGAC                                                                                                     >  1:1058507‑M2/4‑100 (MQ=255)
aTCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGAC                                                                                                     >  1:936342‑M2/1‑100 (MQ=255)
aTCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGAC                                                                                                     <  2:201859‑M2/100‑1 (MQ=255)
aTCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGAC                                                                                                     <  2:2498194‑M2/100‑1 (MQ=255)
 tCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGaca                                                                                                    >  1:2519985/1‑100 (MQ=33)
  cggtcttccGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGaca                                                                                                    <  2:642487/92‑1 (MQ=255)
  ccGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGacaa                                                                                                   >  2:18371/1‑100 (MQ=32)
   cGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGGTAAGACGCATAGCGTCGCATACGacaac                                                                                                  >  2:584534/1‑100 (MQ=12)
   cGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGacaac                                                                                                  <  2:2215803/100‑1 (MQ=32)
   cGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGacaac                                                                                                  >  2:1421942/1‑100 (MQ=33)
     aCAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGAcaacaa                                                                                                >  2:911382/1‑100 (MQ=35)
        aCCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAAtct                                                                                             <  2:1594294/100‑1 (MQ=40)
          cGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCg                                                                                           <  1:437401/100‑1 (MQ=40)
          cGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCg                                                                                           <  1:1421949/100‑1 (MQ=40)
          cGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCg                                                                                           <  1:1608505/100‑1 (MQ=40)
          cGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCCCg                                                                                           <  1:1896357/100‑1 (MQ=255)
           gATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATACGACAACAATCTCGa                                                                                          >  2:1365933/1‑100 (MQ=255)
             tGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGAcc                                                                                        <  2:874446/100‑1 (MQ=255)
             tGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGAcc                                                                                        <  2:1917620/100‑1 (MQ=255)
              gCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGAccc                                                                                       <  2:151327/100‑1 (MQ=255)
              gCCTGATGCGCCGCTGACGCGACTTAGCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGAccc                                                                                       <  2:298231/100‑1 (MQ=255)
                 tGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTAc                                                                                    >  2:100091/1‑100 (MQ=255)
                  gATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACa                                                                                   <  1:1472133/100‑1 (MQ=255)
                       gccgcTGACGTGACTTATCAGGCCTACGGGGTTAACTTTACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCTACCCTACa                                                                                   <  2:484455/95‑1 (MQ=14)
                       gccgcTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGa                                                                              >  2:961459/1‑100 (MQ=255)
                         cgcTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATa                                                                            <  2:4461/100‑1 (MQ=255)
                         cgcTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATa                                                                            <  2:1729558/100‑1 (MQ=255)
                              aCGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAAt                                                                       <  2:1498587/100‑1 (MQ=255)
                               cgcgACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAAt                                                                       >  2:1616849/1‑99 (MQ=255)
                               cgcgACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATg                                                                      <  2:1312946/100‑1 (MQ=255)
                               cgcgACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATg                                                                      >  2:57134/1‑100 (MQ=255)
                                gcgACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGa                                                                     >  2:1886306/1‑100 (MQ=255)
                                   aCTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGa                                                                  <  2:2519972/100‑1 (MQ=255)
                                     ttATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAgg                                                                <  1:407634/100‑1 (MQ=255)
                                     ttATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAgg                                                                <  1:1472096/100‑1 (MQ=255)
                                     ttATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAg                                                                 >  1:1924097/1‑99 (MQ=255)
                                       aTCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGac                                                              <  2:1611322/100‑1 (MQ=255)
                                         cAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGac                                                              <  2:2068921/98‑1 (MQ=255)
                                          aGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGCCAACAATCTCGACCCTACAAATGATAACAATGACGAGGacaac                                                           >  2:2398355/1‑100 (MQ=255)
                                          aGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGacaac                                                           >  1:2576872/1‑100 (MQ=255)
                                          aGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGacaac                                                           >  1:2414671/1‑100 (MQ=255)
                                            gCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGACAACAt                                                         >  1:829860/1‑100 (MQ=255)
                                             ccTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGACAACATg                                                        >  2:1239011/1‑100 (MQ=255)
                                                aCGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGACAACATGAGc                                                     <  2:1136836/100‑1 (MQ=255)
                                                  ggggTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGACAACATGAGCGa                                                   <  2:400748/100‑1 (MQ=255)
                                                  ggggTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGACAACATGAGCGa                                                   <  1:1682235/100‑1 (MQ=255)
                                                   gggTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGACAACATGAGCGac                                                  <  2:720480/100‑1 (MQ=255)
                                                    ggTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGACAACATGAGCGan                                                  <  2:1357625/99‑2 (MQ=255)
                                                       gaactgaactGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGACAACATGAGCGACACaa                                              >  1:1852245/1‑100 (MQ=255)
                                                        aactgaactgTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGACAACATGAGCGACACaa                                              <  1:665086/99‑1 (MQ=255)
                                                        aactgaactgTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGACAACATGAGCGACACAAc                                             <  2:1123815/100‑1 (MQ=255)
                                                          ctgaactgTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGACAACATGAGCGACACAACGa                                           >  2:1523052/1‑100 (MQ=255)
                                                          ctgaactgTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGACAACATGAGCGACACAACGa                                           >  2:1840054/1‑100 (MQ=255)
                                                            gaactgTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGACAACATGAGCGACACAACGATc                                         <  2:186207/100‑1 (MQ=255)
                                                             aactgTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGACAACATGAGCGACACAACGATcc                                        <  2:2337139/100‑1 (MQ=255)
                                                              gattgttgTCGGATGCGACGCTATGCGTCTTATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGACAACATCAGCGACACAACGATCCt                                       >  2:1128389/8‑100 (MQ=21)
                                                              actgTAGGTCGGATGAGACGTATAGAGTGGCATCCGACGACAATCTGGACACAACGAATAATAACAATGAGGAGGCAAACATAAGCGACAGAAAGATcc                                        >  2:1182136/1‑99 (MQ=16)
                                                                 gTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGACAACATGAGCGACACAACGATCCTGCa                                    <  1:1205815/100‑1 (MQ=255)
                                                                  tAGGTCGGATAAGACGCATAGCGTCGCATCCGACctacagttcagtgcaccccgtaggcctgataagtcacgtcagcggcgcatcaggcatcggttgtcg                                   >  2:121910‑M2/1‑34 (MQ=255)
                                                                  tAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGACAACATGAGCGACACAACGATCCTGCaa                                   <  2:687776/100‑1 (MQ=255)
                                                                   aGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGTGGACAACATGAGCGACACAACGATCCTGCaaa                                  >  2:740012/1‑100 (MQ=255)
                                                                    ggTCGGATAAGACGCATAGCGTGGCATCCGACAACAATCTCGACTCTACAAATGATAACAATGACGAGGACAACATGAGCGACACAACGATCCTGCaaa                                  <  2:1754105/99‑1 (MQ=255)
                                                                    ggTCGGATAAGACGCATAGCGTCGCATCCGACctacagttcagttcaccccgtaggcctgataagtcgcgtcagcggcgcatcaggcatcggttgtcgga                                 <  1:1552907‑M2/100‑69 (MQ=255)
                                                                    ggTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGACAACATGAGCGACACAACGATCCTGCaaaa                                 <  1:78435/100‑1 (MQ=255)
                                                                    ggTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGACAACATGAGCGACACAACGATCCTGCaaaa                                 >  2:902685/1‑100 (MQ=255)
                                                                     gTCGGATAAGACGCATAGCGTCGCATCCGACctacagttcagttcaccccgtaggcctgataagtcgcgtcagcggcgcatcaggcatcggttgtcggat                                <  2:1779091‑M2/100‑70 (MQ=255)
                                                                     gTCGGATAAGACGCATAGCGTCGCATCCGACctacagttcagttcaccccgtaggcctgataagtcgcgtcagcggcgcatcaggcatcggttgtcggat                                <  1:286978‑M2/100‑70 (MQ=255)
                                                                     gTCGGATAAGACGCATAGCGTCGCATCCGACctacagttcagtgcaccccgtaggcctgataagtcgcgtcagcggcgcatcaggcatcggttgtcggat                                <  1:61882‑M2/100‑70 (MQ=255)
                                                                     gTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGACAACATGAGCGACACAACGATCCTGCAAAAc                                <  1:1391670/100‑1 (MQ=255)
                                                                     gTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGACAACATGAGCGACACAACGATCCTGCAAAAc                                <  2:2014937/100‑1 (MQ=255)
                                                                       cGGATAAGACGCATAGCGTCGCGTCCGACctacagttcagttcaccccgtaggcctgataagtcgcgtcagcggcgcatcaggcatcggttgtcggatgc                              <  2:978612‑M2/100‑72 (MQ=255)
                                                                       cGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGACAACATGAGCGACACAACGATCCTGCAAAACAg                              >  1:481816/1‑100 (MQ=255)
                                                                        ggATAAGACGCATAGCGTCGCATCCGACctacagttcagtgcaccccgtaggcctgataagtcgcgtcagcggcgcatcaggcatcggttgtcggatgcg                             <  2:913805‑M2/100‑73 (MQ=255)
                                                                          ataataCGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGACAACATGAGCGACACAACGATCCTGCAAAACAGTa                            <  1:2433774/99‑1 (MQ=255)
                                                                             aGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGACAACATGAGGGACACAACGATCCTGCAAAACAGTACCCa                        >  1:1252438/1‑100 (MQ=255)
                                                                             aGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGACAACATGAGCGACACAACGATCCTGCAAAACAGTACCCa                        <  1:1988905/100‑1 (MQ=255)
                                                                              gACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGACAACATGAGCGACACAACGATCCTGCAAAACAGTACCCAt                       >  2:1032938/1‑100 (MQ=255)
                                                                                 gCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGACAACATGAGCGACACAACGATCCTGCAAAACAGTACCCATGTc                    <  1:359623/100‑1 (MQ=255)
                                                                                  cATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGACAACATGAGCGACACAACGATCCTGCAAAACAGTACCCATGTCa                   <  1:753376/100‑1 (MQ=255)
                                                                                  cATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGACAACATGAGCGACACAACGATCCTGCAAAACAGTACCCATGTCa                   >  2:60867/1‑100 (MQ=255)
                                                                                    tAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGACAACATGAGCGACACAACGATCCTGCAATACAGTACCCATGTCAtt                 >  2:2104875/1‑100 (MQ=255)
                                                                                    tAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGACAACATGAGCGACACAACGATCCTGCAAAACAGTACCCATGTCAtt                 <  1:775146/100‑1 (MQ=255)
                                                                                      gCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGACAACATGAGCGACACAACGATCCTGCAAAACAGTACCCATGTCATTaa               <  1:1032943/100‑1 (MQ=255)
                                                                                      gCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGACAACATGAGCGACACAACGATCCTGCAAAACAGTACCCATGTCATTaa               >  2:1870790/1‑100 (MQ=255)
                                                                                      gCGTCGCATCCGACAACAATCTCGACCCTACAAATGAGAACAATGACGAGGACAACATGAGCGACACAACGATCCTGCAAAACAGTACCCATGTCATTaa               >  2:2412835/1‑100 (MQ=255)
                                                                                       cGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGACAACATGAGCGACACAACGATCCTGCAAAACAGTACCCATGTCATTaaa              >  1:2160788/1‑100 (MQ=255)
                                                                                        gTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGACAACATGAGCGACACAACGATCCTGCAAAACAGTACCCATGTCATTAAAc             <  2:1671912/100‑1 (MQ=255)
                                                                                         tCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGACAACATGAGCGACACAACGATCCTGCAAAACAGTACCCATGTCATTAAAcc            <  2:2590862/100‑1 (MQ=255)
                                                                                         tCGCATCCGAAAACAATCTCGACCCTACAAATGATAACAAAGACGAGGACAACATGAGCGACACAACGATCCTGCAAAACAGTACCCATGTCATTAAAcc            <  1:1686422/100‑1 (MQ=255)
                                                                                          cGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGACAACATGAGCGACACAACGATCCTGCAAAACAGTACCCATGTCATTAAAcc            <  1:1270570/99‑1 (MQ=255)
                                                                                          cGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGACAACATGAGCGACACAACGATCCTGCAAAACAGTACCCATGTCATTAAACCg           >  2:1741707/1‑100 (MQ=255)
                                                                                           gCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGACAACATGAGCGACACAACGATCCTGCAAAACAGTACCCATGTCATTAAACCGa          >  1:2034678/1‑100 (MQ=255)
                                                                                             aTCCGACctacagttcagttcaccccgtaggcctgataagtcgcgtcagcggcgcatcaggcatcggttgtcggatgcgacgctatgcgtcttatccgac        >  1:2137357‑M2/1‑7 (MQ=255)
                                                                                             aTCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGACAACATGAGCGACACAACGATCCTGCAAAACAGTACCCATGTCATTAAACCGaaa        <  1:800550/100‑1 (MQ=255)
                                                                                              tCCGACctacagttcagttcaccccgtaggcctgataagtcgcgtcagcggcgcatcaggcatcggttgtcggataagacgcatagcgtcgcatccgaca       >  1:959232‑M2/1‑6 (MQ=255)
                                                                                              tCCGACctacagttcagttcaccccgtacgcctgataaggcgcgtcagcggcgcatcaggcatcggttgtcggatgcgacgctatgcgtcttatccgac        >  2:1159867‑M2/1‑6 (MQ=255)
                                                                                                cGACctacagttcagttcaccccgtaggcctgataagtcgcgtcagcggcgcatcaggcatcggttgtcggatgcgacgctatgcgtcttatccgaccta     <  1:1479436‑M2/100‑97 (MQ=255)
                                                                                                cGACctacagttcagttcaccccgtaggcctgataagtcgcgtcagcggcgcatcaggcatcggttgtcggatgcgacgctatgcgtcttatccgac        <  2:222001‑M2/97‑94 (MQ=255)
                                                                                                  aCctacagttcagttcaccccgtaggcctgataagtcgcgtcagcggcgcatcaggcatcggttgtcggatgcgatgccatccgtcttatccgacctaca   >  2:2029404‑M2/1‑2 (MQ=255)
                                                                                                   cctacagttcagttcaccccgtaggcctgataagtcgcgtcagcggcgcatcaggcatcggttgtcggatgcgacgctatgggtcttatccgacctacag  <  1:2566149‑M2/100‑100 (MQ=255)
                                                                                                   |                                                                                                   
ATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGAACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACAATCTCGACCCTACAAATGATAACAATGACGAGGACAACATGAGCGACACAACGATCCTGCAAAACAGTACCCATGTCATTAAACCGAAAAAATCT  >  NC_000913/349870‑350068

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.