New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 1269275NA (NA)12 (0.140) 6/162 NT 16.3% coding (1/108 nt) ldrA toxic polypeptide, small
?NC_000913 = 1269313 68 (0.730)intergenic (‑38/+390) ldrA/ldrB toxic polypeptide, small/toxic polypeptide, small

CCCGCCAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCAGGTTGTACCTCTCAACGTGCGGGGGTTTTCTCTTTCCAGCAACCAATGCCACC  >  NC_000913/1269214‑1269410
                                                                                                   |                                                                                                 
cccGCCAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTAT                                                                                                   <  1:420799‑M2/100‑1 (MQ=255)
           cGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGt                                                                                        >  1:1491601/1‑100 (MQ=33)
             gTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTc                                                                                      <  1:1746232/100‑1 (MQ=35)
               gctgcCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTg                                                                                    >  1:1235767/1‑100 (MQ=38)
               gctgcCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTg                                                                                    >  2:948284/1‑100 (MQ=38)
                ctgcCAGGTCGTGCCAGAAAATCATGGCAAACTGCTCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTgg                                                                                   <  2:2520055/100‑1 (MQ=255)
                ctgcCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTgg                                                                                   <  2:1285136/100‑1 (MQ=40)
                cagcCAGGTCGTGACAGAAAATCATGGCAAAATGCGCGAGCGACATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTgg                                                                                   >  1:1757614/3‑100 (MQ=14)
                 tgcCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGt                                                                                  <  2:1849644/100‑1 (MQ=40)
                 tgcCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGt                                                                                  <  1:2502124/100‑1 (MQ=40)
                         cGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGa                                                                            <  2:257030/98‑1 (MQ=255)
                          gTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTa                                                                         >  1:1872729/1‑100 (MQ=255)
                           tGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTTAAGATTa                                                                         >  1:665355/1‑99 (MQ=255)
                            gCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGc                                                                       >  1:605397/1‑100 (MQ=255)
                             ccAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGcc                                                                      >  1:306191/1‑100 (MQ=255)
                              cAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGccc                                                                     >  2:376254/1‑100 (MQ=255)
                               aGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGcccc                                                                    >  2:216489/1‑100 (MQ=255)
                               aGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGcccc                                                                    >  2:55808/1‑100 (MQ=255)
                                      cATGGCAAACTGCGCGAGCGTCATATAGCCGTCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCtg                                                             <  2:1667668/100‑1 (MQ=255)
                                      cATGGCAAACTGCGCGAGCGTCATATAGCCGCATTGTTGTAATGACAACATTGTGCGGCTATTCTTGAATTGTTCTGGTTCAGGATTAGCCCCCGtt                                                                <  2:1232612/97‑1 (MQ=255)
                                       aTGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCtgt                                                            >  1:536076/1‑100 (MQ=255)
                                       aTGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCtgt                                                            <  2:525572/100‑1 (MQ=255)
                                       aTGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCtgt                                                            >  2:2148649/1‑100 (MQ=255)
                                       aTGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTAGTTCAAGATTAGCCCCCGTTCtgt                                                            >  2:934161/1‑100 (MQ=255)
                                        tGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCtgtt                                                           >  2:2227957/1‑100 (MQ=255)
                                         ggCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCtgttg                                                          <  1:2341445/100‑1 (MQ=255)
                                          gCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCtgttgt                                                         >  2:966640/1‑100 (MQ=255)
                                            aaaCTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCa                                                       <  2:630898/100‑1 (MQ=255)
                                               cTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCAGGt                                                    <  1:2122780/100‑1 (MQ=255)
                                                    cgAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATatgacgctcgcgcagtttgccatgattttctggcacgacctggcagcaccga                                               <  2:784629‑M2/100‑53 (MQ=255)
                                                    cgAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCAGGTTGTAc                                               >  1:1977726/1‑100 (MQ=255)
                                                       gCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATatgacgctcgcgcagtttgccatgattttctggcacgacctggcagcaccgatcc                                            <  1:66559‑M2/100‑56 (MQ=255)
                                                       gCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATatgacgctcgcgcagtttgccatgactttctggcacgacctggcggcaccgatcc                                            <  2:654564‑M2/100‑56 (MQ=255)
                                                       gCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCAGGTTGTACctc                                            >  1:1502839/1‑100 (MQ=255)
                                                          tCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATatgacgctcgcgcagttttccatgactttctggcacgacctggcggcaccgatcctgg                                         <  1:671571‑M2/100‑59 (MQ=255)
                                                          tCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATatgacgcccgcgcagtttgccatgactttctagcacgacctggcggcaccgatcctg                                          <  1:567655‑M2/99‑58 (MQ=255)
                                                           cATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATatgacgctcgcgcagtttgccatgattttctggcacgacctggccgcaccgatcctggc                                        <  2:1662012‑M2/100‑60 (MQ=255)
                                                           cATATAGCCGCCTTGTTGTAAAGACAACATTTTGCGGCTATatgacgctcgcgcagtttgccatgattttctggcacgacctggcagcaccgatcctg                                          <  2:2019397‑M2/98‑58 (MQ=255)
                                                            atatAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATatgacgctcgcgcagtttgccatgattttctggcacgacctggcagcaccgatcctggcg                                       <  1:2501032‑M2/100‑61 (MQ=255)
                                                            atatAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCAGGTTGTACCTCTCAAc                                       <  2:1736521/100‑1 (MQ=255)
                                                            atatAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCAGGTTGTACCTCTCAAc                                       <  2:2517357/100‑1 (MQ=255)
                                                            atatAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCAGGTTGTACCTCTCAAc                                       >  2:814045/1‑100 (MQ=255)
                                                            atatAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCAGGTTGTACCTCTCAAc                                       <  2:1627517/100‑1 (MQ=255)
                                                             tataGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATatgacgctcgcgcagtttgccatgattttctggcacgacctggcagcaccgatcctggcgg                                      <  1:1494938‑M2/100‑62 (MQ=255)
                                                             tataGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATatgacgctcgcgcagtttgccatgattttctggcacgacctggcagcaccgatcctggcgg                                      <  1:1067616‑M2/100‑62 (MQ=255)
                                                             tataGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATatgacgctcgcgcagtttgccatgattttctggcacgacctggcagcaccgatcctggcgg                                      <  2:1466783‑M2/100‑62 (MQ=255)
                                                             tataGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCAGGTTGTACCTCTCAACg                                      <  1:40753/100‑1 (MQ=255)
                                                             tataGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCAGGTTGTACCTCTCAACg                                      <  2:306188/100‑1 (MQ=255)
                                                                 gccgccTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCAGGTTGTACCTCTCAACGTGCg                                  >  2:1041420/1‑100 (MQ=255)
                                                                  ccgccTTGTTGTAATGACAACATTTTGCGGCTATatgacgctcgcgcagtttgccatgattttctggcacgacctggcagcaccgatcctggcgggaatt                                 >  1:784634‑M2/1‑34 (MQ=255)
                                                                  ccgccTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCTCCCGTTCTGTTGTCAGGTTGTACCTCTCAACGTGCgg                                 >  2:1168585/1‑100 (MQ=255)
                                                                  ccgccTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCAGGTTTTACCTCTCAACGTGCgg                                 >  2:1286422/1‑100 (MQ=255)
                                                                  ccgccTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCAGGTTGTACCTCTCAACGTGCgg                                 >  1:2274290/1‑100 (MQ=255)
                                                                   cgccTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCAGGTTGTACCTCTCAACGTGCggg                                >  2:731303/1‑100 (MQ=255)
                                                                       ttgttgTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCAGGTTGTACCTCTCAACGTGCGGGGGtt                            <  1:2370759/100‑1 (MQ=255)
                                                                          ttgtAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCAGGTTGTACCTCTCAACGTGCGGGGGTTTtc                         <  2:415108/100‑1 (MQ=255)
                                                                           tgtAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGGTCAAGATTAGCCCCCGTTCTGTTGTCAGGTTGTACCTCTCAACGTGCGGGGGTTTtct                        <  2:637832/100‑1 (MQ=255)
                                                                            gtAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCAGGTTGTACCTCTCAACGTGCGGGGGTTTtctc                       <  1:2227969/100‑1 (MQ=255)
                                                                            gtAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCAGGTTGTACCTCTCAACGTGCGGGGGTTTtctc                       >  1:406261/1‑100 (MQ=255)
                                                                              aaTGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCAGGTTGTACCTCTCAACGTGCGGGGGTTTTCTCtt                     <  2:358484/100‑1 (MQ=255)
                                                                                tGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCAGGTTGTACCTCTCAACGTGCGGGGGTTTTCTCTTTc                   >  1:1642543/1‑100 (MQ=255)
                                                                                tGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCAGGTTGTACCTCTCAACGTGCGGGGGTTTTCTCTTTc                   <  1:1388332/100‑1 (MQ=255)
                                                                                tGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCAGGTTGTACCTCTCAACGTGCGGGGGTTTTCTCTTTc                   <  2:1697881/100‑1 (MQ=255)
                                                                                 gACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCAGGTTGTACCTCTCAACGTGCGGGGGTTTTCTCTTTcc                  <  2:2303476/100‑1 (MQ=255)
                                                                                 gACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCAGGTTGTACCTCTCAACGTGCGGGGGTTTTCTCTTTcc                  <  2:282551/100‑1 (MQ=255)
                                                                                 gACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCAGGTTGTACCTCTCAACGTGCGGGGGTTTTCTCTTTcc                  <  2:1898748/100‑1 (MQ=255)
                                                                                  acaacaTTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCAGGTTGTACCTCTCAACGTGCGGGGGTTTTCTCTTTCCa                 >  2:1470987/1‑100 (MQ=255)
                                                                                  acaacaTTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCAGGTTGTACCTCTCAACGTGCGGGGGTTTTCTCTTTCCa                 <  2:89091/100‑1 (MQ=255)
                                                                                  acaacaTTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCAGGTTGTACCTCTCAACGTGCGGGGGTTTTCTCTTTCCa                 <  1:946939/100‑1 (MQ=255)
                                                                                   caacaTTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCAGGTTGTACCTCTCAACGTGCGGGGGTTTTCTCTTTCCAg                >  2:1859349/1‑100 (MQ=255)
                                                                                    aacaTTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCGCCCGTTCTGTTGTCAGGTTGTCCCTCTAAACGTGCGGGGGGTTTCTTTTTCGAGc               >  2:1694255/1‑100 (MQ=17)
                                                                                    aacaTTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCAGGTTGTACCTCTCAACGTGCGGGGGTTTTCTCTTTCCAGc               <  1:2103653/100‑1 (MQ=255)
                                                                                     acaTTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCAGGTTGTACCTCTCAACGTGCGGGGGTTTTCTCTTTCCAGCa              >  1:176362/1‑100 (MQ=255)
                                                                                      caTTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCAGGTTGTACCTCTCAACGTGCGGGGGTTTTCTCTTTCCAGCaa             <  1:1421864/100‑1 (MQ=255)
                                                                                        ttttGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCAGGTTGTACCTCTCAACGTGCGGGGGTTTTCTCTTTCCAGCAAcc           <  1:2298557/100‑1 (MQ=255)
                                                                                            gCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCAGGTTGTACCTCTCAACGTGCGGGGGTTTTCTCTTTCCAGCAACCAATg       <  1:732743/100‑1 (MQ=255)
                                                                                            gCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCAGGTTGTACCTCTCAACGTGCGGGGGTTTTCTCTTTCCAGCAACCAATg       >  2:537342/1‑100 (MQ=255)
                                                                                             cGGCTATatgacgctcgcgcagtttgccatgattttctggcacgacctggcagcaccgatcctggcgggaattattaccgcagcgattgtcagctggtgg      >  1:358488‑M2/1‑7 (MQ=255)
                                                                                             cGGCTATatgacgctcgcgcagtttgccatgattttctggcacgacctggcagcaccgatcctggcgggaattattaccgcagcgattgtcagctggtgg      >  1:1258586‑M2/1‑7 (MQ=255)
                                                                                             cGGCTATTCTTGAATTGTTCTGGTTCACGATTAGCCCCCGTTCTGTTGTCAGGTTGTACCTCTCAACGTGCGGGGGTTTTCTCTTTCCAGCAACCAAt        <  2:482926/98‑1 (MQ=255)
                                                                                             cGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCAGGTTGTACCTCTCAACGTGCGGGGGTTTTCTCTTTCCAGCAACCAATGc      <  1:1859358/100‑1 (MQ=255)
                                                                                             cGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCAGGTTGTACCTCTCAACGTGCGGGGGTTTTCTCTTTCCAGCAACCAATGc      >  2:1397791/1‑100 (MQ=255)
                                                                                              ggCTATatgacgctcgcgcagtttgccatgattttctggcacgacctggcagcaccgatcctggcgggaattattaccgcagcgattgtcagctggtggc     >  1:2291881‑M2/1‑6 (MQ=255)
                                                                                              ggCTATatgacgctcgcgcagtttgccatgattttctggcacgacctggcagcaccgatcctggcgggaattattaccgcagcgattgtcagctggtggc     >  1:2555350‑M2/1‑6 (MQ=255)
                                                                                              ggCTATatgacgctcgcgcagtttgccatgattttctggcacgacctggcagcaccgatcctggcgggaattattaccgcagcgattgtcagctggtggc     >  1:2557062‑M2/1‑6 (MQ=255)
                                                                                              ggCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCAGGTTGTACCTCTCAACGTGCGGGGGTTTTCTCTTTCCAGCAACCAATGcc     <  2:1642534/100‑1 (MQ=255)
                                                                                               gCTATatgacgctcgcgcagtttgccatgattttctggcacgacctggcagcaccgatcctggcgggaattattaccgcagcgattgtcagctggtggcg    >  2:1462156‑M2/1‑5 (MQ=255)
                                                                                               gCTATatgacgctcgcgcagtttgccatgattttctggcacgacccggcagcaccgatcctggcgggaattattaccgcagcgattgtcagctggtggcg    >  2:1027776‑M2/1‑5 (MQ=255)
                                                                                               gCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCAGGTTGTACCTCTCAACGTGCGGGGGTTTTCTCTTTCCAGCAACCAATGcca    >  1:2566022/1‑100 (MQ=255)
                                                                                                cTATatgacgctcgcgcagtttgccatgattttctggcacgacctggcagcaccgatcctggcgggaattattaccgcagcgattgtcagctggtggcg    <  1:1212358‑M2/99‑96 (MQ=255)
                                                                                                cTATTCTTGACTTGTTCTGGTTCACGATTAGCCCCCGTTCTGTTGTCAGGTTGTACCTCTCAACGTGCGGGGGTTTTCTCTTTCCAGCCACCAATGccac   <  2:1297139/100‑1 (MQ=255)
                                                                                                 tatatgacgctcgcgcagtttgccatgattttctggcacgacctggcagcaccgatcctggcgggaattattaccgcagcgattgtcagctggtggcgta  >  1:766711‑M2/1‑3 (MQ=255)
                                                                                                   |                                                                                                 
CCCGCCAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCAGGTTGTACCTCTCAACGTGCGGGGGTTTTCTCTTTCCAGCAACCAATGCCACC  >  NC_000913/1269214‑1269410

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.