New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2794028 =NA (NA)9 (0.100) 7/166 NT NA noncoding (1/136 nt) REP191 (repetitive extragenic palindromic) element; contains 3 REP sequences REP191 (repetitive extragenic palindromic) element; contains 3 REP sequences
?NC_000913 2794059 = NA (NA)noncoding (32/136 nt) REP191 (repetitive extragenic palindromic) element; contains 3 REP sequences REP191 (repetitive extragenic palindromic) element; contains 3 REP sequences

Only 100 of 127 total aligned reads displayed.

AGATCCGTCAGGGTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCT  >  NC_000913/2793960‑2794158
                                                                                                   |                                                                                                   
aGATCCGTCAGGGTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGcc                                                                                                     >  2:1530189/1‑100 (MQ=255)
aGATCCGTCAGGGTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGcc                                                                                                     <  1:2580654/100‑1 (MQ=255)
 gATCCGTCAGGGTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCt                                                                                                    >  2:51717/1‑100 (MQ=255)
 gATCCGTCAGGGTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCAGCCt                                                                                                    >  2:697416/1‑100 (MQ=255)
   cttcctgttcacgtacagattgtcggatgcggcgtaaacgccttatccgacctggatccccgtagGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTAc                                                                                                  <  1:1828479‑M1/35‑1 (MQ=255)
    ttcctgttcacgtacagattgtcggatgcggcataaacggcttatccgacctggatccccgtagGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACg                                                                                                 >  2:1828470‑M1/65‑100 (MQ=255)
    ccGTCAGGGTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACg                                                                                                 <  1:1013796/100‑1 (MQ=255)
     tcctgttcacgtacagattgtcggatgcggcgtaaacgccttatccgacctggatccccgtagGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACgg                                                                                                >  2:177132‑M1/64‑100 (MQ=255)
      gTCAGGGTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACggg                                                                                               >  1:1869961/1‑100 (MQ=255)
      gTCAGGGTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACggg                                                                                               <  2:1650692/100‑1 (MQ=255)
      gTCAGGGTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACggg                                                                                               <  1:607145/100‑1 (MQ=255)
      cctgttcacgtacagattgtcggatgcggcgtaaacgccttatccgacctggatccccgtagGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACggg                                                                                               >  1:991658‑M1/63‑100 (MQ=255)
      cctgttcacgtacagattgtcggatgcggcgtaaacgccttatccgacctggatccccgtagGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACggg                                                                                               >  1:851682‑M1/63‑100 (MQ=255)
       ctgttcacgtacagattgtcggatgcggcgtaaacgccttatccgacctggatccccctatGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACgggg                                                                                              >  1:1596320‑M1/62‑100 (MQ=255)
        cAGGGTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGa                                                                                             >  2:363652/1‑100 (MQ=255)
           ggTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGAtgc                                                                                          >  2:1578687/1‑98 (MQ=255)
           ggTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATcc                                                                                          <  1:1171613/100‑1 (MQ=255)
                  agaTCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCgg                                                                                   <  1:485953/100‑1 (MQ=255)
                    atcatcAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGAt                                                                                 >  2:1072989/1‑100 (MQ=255)
                     tcatcaGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATa                                                                                >  2:58373/1‑100 (MQ=255)
                     tcatcaGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATa                                                                                >  1:1375307/1‑100 (MQ=255)
                      catcaGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATaa                                                                               >  1:884084/1‑100 (MQ=255)
                        tcaGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAgg                                                                             <  2:546969/100‑1 (MQ=255)
                        tcaGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAgg                                                                             <  1:621237/100‑1 (MQ=255)
                          agtcAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCg                                                                           <  2:1536183/97‑1 (MQ=255)
                          aGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCg                                                                           <  1:783236/100‑1 (MQ=255)
                            ccAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGtt                                                                         >  2:2501864/1‑100 (MQ=255)
                               gtgtTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTAc                                                                      <  1:133878/100‑1 (MQ=255)
                                tgtTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTAcg                                                                     <  2:1954229/100‑1 (MQ=255)
                                tgtTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTAcg                                                                     >  2:356086/1‑100 (MQ=255)
                                tgtTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTAcg                                                                     <  1:292711/100‑1 (MQ=255)
                                 gtTTTGATGAGGCGGAGCAGTAGCGCCGCTCCCATGCCGGAGGCGAGGCGGCGGGCCTCGTCCGGCCTCCGGGGATCCAGGTCGGATAAGGCGctt                                                                        >  2:568185/1‑96 (MQ=255)
                                 gtTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTAcgc                                                                    >  1:2285863/1‑100 (MQ=255)
                                 gtTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTAcgc                                                                    >  1:598801/1‑100 (MQ=255)
                                 gtTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTAcgc                                                                    >  1:1582089/1‑100 (MQ=255)
                                  ttttGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTAcgcc                                                                   >  1:62665/1‑100 (MQ=255)
                                   tttGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTAcgccg                                                                  <  2:2383865/100‑1 (MQ=255)
                                   tttGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTAcgccg                                                                  <  1:739092/100‑1 (MQ=255)
                                    ttGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATACGGCGTTTAcgccgc                                                                 >  1:1853293/1‑100 (MQ=255)
                                      gatgaGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACTGGGATCCAGGTCGGATAAGGCGTTTACGCCGCAt                                                               >  2:766868/1‑100 (MQ=255)
                                      gatgaGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCAt                                                               <  2:857543/100‑1 (MQ=255)
                                      gatgaGGCGAAGCAGTAGCACCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCAt                                                               >  2:1480766/1‑100 (MQ=255)
                                         gaGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCg                                                            >  1:536343/1‑100 (MQ=255)
                                         gaGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCAGCATCCg                                                            >  2:2365663/1‑100 (MQ=255)
                                           ggCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGAc                                                          >  1:697737/1‑100 (MQ=255)
                                           ggCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGAc                                                          >  2:2572740/1‑100 (MQ=255)
                                             cGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACaa                                                        >  1:1733898/1‑100 (MQ=255)
                                                aGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCt                                                     <  2:631625/100‑1 (MQ=255)
                                                aGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCt                                                     <  1:363656/100‑1 (MQ=255)
                                                  cAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGt                                                   >  1:973711/1‑100 (MQ=255)
                                                   aGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTa                                                  <  2:65955/100‑1 (MQ=255)
                                                   aGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTa                                                  >  1:2319133/1‑100 (MQ=255)
                                                    gTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTAc                                                 >  1:70897/1‑100 (MQ=255)
                                                     tAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACg                                                >  1:1814860/1‑100 (MQ=255)
                                                      aGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGt                                               >  1:1133267/1‑100 (MQ=255)
                                                      aGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGt                                               >  1:2479218/1‑100 (MQ=255)
                                                       gcgcCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACg                                                <  2:1029023/98‑1 (MQ=255)
                                                       gcgcCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTg                                              >  1:176725/1‑100 (MQ=255)
                                                        cgccgcTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGa                                             <  1:1726920/100‑1 (MQ=255)
                                                        cgccgcTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGa                                             >  1:2544442/1‑100 (MQ=255)
                                                         gccgcTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGaa                                            >  1:2281238/1‑100 (MQ=255)
                                                          ccgcTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAAc                                           <  1:853470/100‑1 (MQ=255)
                                                           cgcTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACa                                          <  2:2285850/100‑1 (MQ=255)
                                                           cgcTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACa                                          >  2:597598/1‑100 (MQ=255)
                                                           cgcTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACa                                          <  1:2144889/100‑1 (MQ=255)
                                                           cgcTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACa                                          <  2:296741/100‑1 (MQ=255)
                                                           cgcTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACa                                          <  2:1375300/100‑1 (MQ=255)
                                                            ccccgtaggccggacaagacgcgcagcgtcgcctccggcATAGGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAg                                         >  1:1596320‑M2/40‑100 (MQ=255)
                                                             cccgtaggccggacaagacgcgcagcgtcgcctccggcCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAgg                                        >  1:851682‑M2/39‑100 (MQ=255)
                                                             cccgtaggccggacaagacgcgcagcgtcgcctccggcCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAgg                                        >  1:991658‑M2/39‑100 (MQ=255)
                                                              ccgtaggccggacaagacgcgcagcgtcgcctccggcCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGga                                       >  2:177132‑M2/38‑100 (MQ=255)
                                                               ccTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGgaa                                      >  1:634543/1‑100 (MQ=255)
                                                               ccTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGgaa                                      >  1:2060182/1‑100 (MQ=255)
                                                                cTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGGCGGATAAGGCGTTTAGGCCGCATCCGACAATCTGTACGTGAACAGgaag                                     >  1:1818636/1‑100 (MQ=255)
                                                                    gccggacaagacgcgcagcgtcgcctccggcCTACGGGGATCCAGGTCTGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAAt                                 >  1:151533‑M2/32‑100 (MQ=255)
                                                                    gccggacaagacgcgcagcgtcgcctccggcCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAAt                                 >  2:1091815‑M2/32‑100 (MQ=255)
                                                                      cggacaagacgcgcagcgtcgcctccggcCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCt                               >  1:2136505‑M2/30‑100 (MQ=255)
                                                                      CGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCt                               <  1:500422‑M1/100‑1 (MQ=255)
                                                                       GGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTa                              <  1:2216931‑M1/100‑1 (MQ=255)
                                                                       GGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTa                              <  1:2510320‑M1/100‑1 (MQ=255)
                                                                        GAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTAt                             >  2:879344‑M1/1‑100 (MQ=255)
                                                                          ggCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGt                           >  1:2122947/1‑100 (MQ=255)
                                                                            cGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTg                         >  2:1913288/1‑100 (MQ=255)
                                                                            cGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTg                         >  1:1742737/1‑100 (MQ=255)
                                                                             gACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTgg                        <  1:1739502/100‑1 (MQ=255)
                                                                               cGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGcc                      <  1:1237708/100‑1 (MQ=255)
                                                                                  tGCGCGTCTTGTCCGGCCTACGTGGATCCAGGTCGGACAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCggg                   <  2:1757923/100‑1 (MQ=255)
                                                                                   gcgcGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGt                  <  2:27795/100‑1 (MQ=255)
                                                                                       gTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAgg              >  1:1146104/1‑100 (MQ=255)
                                                                                       gTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAgg              <  1:100626/100‑1 (MQ=255)
                                                                                             tccggcCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGc        <  2:907270‑M2/94‑1 (MQ=255)
                                                                                             tccggcCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGc        >  2:1501233‑M2/7‑100 (MQ=255)
                                                                                              ccggcCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCACATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGcc       <  1:103275‑M2/95‑1 (MQ=255)
                                                                                                ggcCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGc     >  1:328220‑M2/4‑100 (MQ=255)
                                                                                                 gcCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGct    >  2:2074258‑M2/3‑100 (MQ=255)
                                                                                                 gcCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGct    <  1:1185062‑M2/98‑1 (MQ=255)
                                                                                                  cCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGctc   >  1:1956010‑M2/2‑100 (MQ=255)
                                                                                                   cTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGctct  >  1:1505183/1‑100 (MQ=255)
                                                                                                   cTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGctct  <  2:1950578/100‑1 (MQ=255)
                                                                                                   cTACGGGGATCCAGGCCGGATAAGGCGTTTACGCCGCATCCGACAGTCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGctct  >  2:1277447/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
AGATCCGTCAGGGTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCT  >  NC_000913/2793960‑2794158

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.