| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4035360 | NA (NA) | 27 (0.310) | 8/166 | NT | 100% | intergenic (+207/‑171) | hemG/rrsA | protoporphyrin oxidase, flavoprotein/16S ribosomal RNA of rrnA operon |
| ? | NC_000913 | = 4035384 | 0 (0.000) | intergenic (+231/‑147) | hemG/rrsA | protoporphyrin oxidase, flavoprotein/16S ribosomal RNA of rrnA operon | |||||
TCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGAAAAATGAATACCAAGTCTCAAGAGTG > NC_000913/4035285‑4035483 | tcCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGGC > 1:1431678‑M2/1‑100 (MQ=255)tcCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGGC < 1:1928187‑M2/100‑1 (MQ=255) ccTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCAGCTCCGCTGAGAAAAAGCGAAGCGGC < 1:853405‑M2/99‑1 (MQ=255) ctctGTAGCGGGAAAGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCAAAGCGGCgcggggtgtgcataatacgctttcccgctacagagtcaagc < 1:1747031‑M2/100‑42 (MQ=255) ttatGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGGCgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctct < 2:1170039‑M2/99‑61 (MQ=255) atGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGGCgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgcc < 1:969310‑M2/100‑64 (MQ=255) cttccgatctcgccgctgagaaaaagCGAAGCGGCgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccgg > 1:1518930‑M2/11‑35 (MQ=255) acacCCCGCGCCGCTGAGAAAAAGCGAAGCGGgtgtgcatnatacnccttcccgcnacagagtnaagcatttatttttgctttctctgccggagttctc < 1:1686309‑M2/100‑68 (MQ=255) ccccGCGCCGCTGAGAAAAAGCGAAGCGGgtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcagg < 1:1599439‑M2/100‑71 (MQ=255) ccccGCGCCGCTGAGAAAAAGCGAAGCGGCgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttc < 1:2571760‑M2/100‑71 (MQ=255) ccccGCGCCGCTGAGAAAAAGCAAAGCGGCgcggggtgtgcataatacgctttcccgctacagagtcaagcatttatttttgctttctctgccggagttc < 1:1389204‑M2/100‑71 (MQ=255) cccGCGCCGCTGAGAAAAAGCAAAGCGGCgcggggtgtgcataatacgctttcccgctacagagtcaagcatttatttttgctttctctgccggagttct < 1:271573‑M2/100‑72 (MQ=255) cccGCGCCGCTGAGAAAAAGCAAAGCGGCgcggggtgtgcataatacgctttcccgctacagagtcaagcatttatttttgctttctctgccggagtgc < 2:1936165‑M2/99‑71 (MQ=255) ccGCGCCGCTGAGAAAAAGCGAAGCGGCgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctc < 1:200236‑M2/100‑73 (MQ=255) ccGCGCCGCTGAGAAAAAGCAAAGCGGCgcggggtgtgcataatacgctttcccgctacagagtcaagcatttatttttgctttctctgccggagttctc < 1:544740‑M2/100‑73 (MQ=255) ccGCGCCGCTGAGAAAAAGCAAAGCGGCgcggggggtgcataatacgctttcccgctacagagtcaagcatttatttttgctttctctgccggagttctc < 2:40475‑M2/100‑73 (MQ=255) cgcgCCGCTGAGAAAAAGCGAAGCGGCgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctca < 1:897874‑M2/100‑74 (MQ=255) cgcgCCGCTGAGAAAAAGCGAAGCGGCgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgatttctctgccggagttctca < 1:1517403‑M2/100‑74 (MQ=255) cgcgCCGCTGAGAAAAAGCAAAGCGGCgcggggtgtgcataatacgctttcccgctacagagtcaagcatttatttttgctttctctgccggagttctca < 2:1051126‑M2/100‑74 (MQ=255) cgcgCCGCTGAGAAAAAGCAAAGCGGCgcggggtgtgcataatacgctttcccgctacagagtcaagcatttatttttgctttctctgccggagctctca < 2:1114033‑M2/100‑74 (MQ=255) gcgcCGCTGAGAAAAAGCAAAGCGGCgcggggtgtgcataatacgctttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcag < 1:659621‑M2/100‑75 (MQ=255) gcgcCGCTGAGAAAAAGCAAAGCGGCgcggggtgtgcataatacgctttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcag < 2:1764882‑M2/100‑75 (MQ=255) cgccgcTGAGAAAAAGCGAAGCGGCgcggggtgtgcataatacgccttcccgctacagagtcaagcctttatttttgctttctctgccggcgctctc < 2:2071449‑M2/97‑73 (MQ=255) cgccgcTGAGAAAAAGCGAAGCGGCgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcagg < 1:1976299‑M2/100‑76 (MQ=255) cgccgcTGAGAAAAAGCGAAGCGGCgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcagg < 2:2047382‑M2/100‑76 (MQ=255) cgccgcTGAGAAAAAGCGAAGCGGCgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcagg < 2:1954450‑M2/100‑76 (MQ=255) cgccgcTGAGAAAAAGCGAAGCGGCgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagatcggaag < 2:1518922‑M2/100‑76 (MQ=255) cctcTGAGAAAAAGCGAAGCGGCgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttatgctttctctgccggagttctcaggag < 2:2369370‑M2/100‑78 (MQ=255) ccgcTGAGAAAAAGCGAAGCGGCgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcaggag < 2:2120087‑M2/100‑78 (MQ=255) ccgcTGAGAAAAAGCAAAGCGGCgcggggtgtgcataatacgctttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcaggag < 1:2343483‑M2/100‑78 (MQ=255) agcgGCgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcaggagaaccccgctgacccggc > 1:1580490‑M2/1‑6 (MQ=255) agcgGCgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcaggagaaccccgctgacccggc < 1:519993‑M2/100‑95 (MQ=255) gcggcgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcaggagaaccccgctgacccggtg > 1:1768866‑M2/1‑5 (MQ=255) cggcgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcaggggaaccccgctgacccggcgg < 1:1620717‑M2/100‑97 (MQ=255) ggcgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcaggagaaccccgctgacccggcggc < 1:2516549‑M2/100‑98 (MQ=255) gcgcggggtgtgcataatccgccttcccgctacagagtccagcatttatttttgctttctctgccggagttctcaggagatccccgctgtccctgcggcg > 2:1782770‑M2/1‑2 (MQ=255) gcgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcaggagaaccccgctgacccggcggcg > 1:1682777‑M2/1‑2 (MQ=255) gcgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcaggagaaccccgctgacccggcggcg > 2:2177269‑M2/1‑2 (MQ=255) gcgcggggtgtgcataatacgacttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcaggagaaccccgctgacccggcggcg > 2:343668‑M2/1‑2 (MQ=255) cgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcaggagaaccccgctgacccggcggcgt < 1:1717660‑M2/100‑100 (MQ=255) | TCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGAAAAATGAATACCAAGTCTCAAGAGTG > NC_000913/4035285‑4035483 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |