New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4325931 =133 (1.420)25 (0.290) 4/164 NT 22.0% noncoding (130/583 nt) REP325 (repetitive extragenic palindromic) element; contains 12 REP sequences REP325 (repetitive extragenic palindromic) element; contains 12 REP sequences
?NC_000913 4326213 = 55 (0.640)noncoding (412/583 nt) REP325 (repetitive extragenic palindromic) element; contains 12 REP sequences REP325 (repetitive extragenic palindromic) element; contains 12 REP sequences

Only 100 of 128 total aligned reads displayed.

AGACGCGCAAGCGTCGCATCAGGCAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGAT  >  NC_000913/4326114‑4326312
                                                                                                   |                                                                                                   
aGACGCGCAAGCGTCGCATCAGGCAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATa                                                                                                     >  1:1480277/1‑100 (MQ=38)
aGACGCGCAAGCGTCGCATCAGGCAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATa                                                                                                     >  1:1480352/1‑100 (MQ=38)
 gACGCGCAAGCGTCGCATCAGGCAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATaa                                                                                                    >  1:1178750/1‑100 (MQ=38)
 gACGCGCAAGCGTCGCATCAGGCAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATaa                                                                                                    <  2:632354/100‑1 (MQ=35)
   cgcgCAAGCGTCGCATCAGGCAGTTGGCACTGTTGCCGGATGCGGCGTAAGCGCCTTATCCGGCATACCGAGGGAGCGGGAAGTTGTAGGCCTGagaaga                                                                                                  >  2:178745/1‑100 (MQ=11)
   cgcgCAAGCGTCGCATCAGGCAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGa                                                                                                  >  1:2264903/1‑100 (MQ=38)
   cgcgCAAGCGTCGCATCAGGCAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGa                                                                                                  >  2:1337648/1‑100 (MQ=38)
   cgcgCAAGCGTCGCATCAGGCAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGa                                                                                                  <  1:2110215/100‑1 (MQ=35)
   cgcgCAAGCGTCGCATCAGGCAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGa                                                                                                  >  1:1916193/1‑100 (MQ=38)
       cAAGCGTCGCATCAGGCAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGAcgcg                                                                                              >  2:1844864/1‑100 (MQ=35)
       cAAGCGTCGCATCAGGCAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGAcgcg                                                                                              >  1:773807/1‑100 (MQ=35)
       cAAGCGTCGCATCAGGCAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGAcgcg                                                                                              <  1:299923/100‑1 (MQ=35)
          gCGTCGCATCAGGCAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCaa                                                                                           <  2:1623793/100‑1 (MQ=33)
            gTCGCATCAGGCAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGc                                                                                         >  1:1784926/1‑100 (MQ=33)
            gTCGCATCAGGCAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGc                                                                                         <  1:2395330/100‑1 (MQ=33)
            gTCGCATCAGGCAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGc                                                                                         >  2:2581128/1‑100 (MQ=32)
            gTCGCATCAGGCAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGc                                                                                         >  1:1538371/1‑100 (MQ=33)
            gTCGCATCAGGCAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGc                                                                                         >  1:1305097/1‑100 (MQ=33)
            gTCGCATCAGGCAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGc                                                                                         >  1:225989/1‑100 (MQ=33)
             tCGCATCAGGCAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCg                                                                                        <  2:1118127/100‑1 (MQ=33)
               gCATCAGGCAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTc                                                                                      >  1:2332052/1‑100 (MQ=33)
               gCATCAGGCAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTc                                                                                      >  1:303334/1‑100 (MQ=33)
                tatcaggcctacaaattcccgcaccctccgtaggccggataaggcgtttacgccgcatccggcaacagtgccgactgcctgatAAGACGCGCGAGCGTCg                                                                                     <  1:2415594‑M2/17‑1 (MQ=255)
                cATCAGGCAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCg                                                                                     >  1:165708/1‑100 (MQ=33)
                cATCAGGCAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCg                                                                                     >  2:1371295/1‑100 (MQ=33)
                cATCAGGCAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCg                                                                                     >  2:781609/1‑100 (MQ=33)
                 aTCAGGCAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGc                                                                                    >  1:1183255/1‑100 (MQ=33)
                  tCAGGCAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCa                                                                                   >  1:1921336/1‑100 (MQ=33)
                     ggCAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCa                                                                                <  1:566676/100‑1 (MQ=32)
                     ggCAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCa                                                                                <  1:128746/100‑1 (MQ=33)
                       cctacaaattcccgcaccctccgtaggccggataaggcgtttacgccgcatccggcaacagtgccgactgcctgatAAGACGCGCGAGCGTCGCATCagn                                                                              <  1:1612476‑M2/24‑2 (MQ=255)
                       cctacaaattcccgcaccctccgtaggccggataaggcgtttacgccgcatccggcaacagtgccgactgcctgatAAGACGCGCAAGCGTCGCATCAgg                                                                              <  2:296824‑M2/24‑1 (MQ=255)
                       cAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTAGCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAgg                                                                              <  1:682313/100‑1 (MQ=18)
                        tccgatcttcccgcaccctccgtaggccggataaggcgtttacgccgcatccggcaacagtgccgactgcctgatAAGACGCGCGAGCGTCGCATCAGGc                                                                             <  2:2535826‑M2/25‑1 (MQ=255)
                        ctacaaattcccgcgccctccgtaggccggataaggcgtttacgccgcatccggcaacagtgccaactgcctgatAAGACGCGCAAGCGTCGCATCAGGc                                                                             <  2:1813557‑M2/25‑1 (MQ=255)
                        ctacaaattcccgcaccctccgtaggccggataaggcgtttacgccgcatccggcaatggtgccgactgcctgatAAGACGCGCAAGCGTCGCATCAGGc                                                                             <  1:1963104‑M2/25‑1 (MQ=255)
                        ctacaaattcccgcaccctccgtaggccggataaggcgtttacgccgcatccggcaacagtgccgactgcctgatAAGACGCGCGAGCGTCGCATCAGGc                                                                             <  1:536039‑M2/25‑1 (MQ=255)
                        ctacaaattcccgcaccctccgtaggccggataaggcgtttacgccgcatccggcaacagtgccgactgcctgatAAGACGCGCGAGCGTCGCATCAGGc                                                                             <  1:1773335‑M2/25‑1 (MQ=255)
                        ctacaaattcccgcaccctccgtaggccggataaggcgtttacgccgcatccggcaacagtgccgactgcctgatAAGACGCGCAAGCGTCGCATCAGGc                                                                             <  1:1049519‑M2/25‑1 (MQ=255)
                        ctacaaattcccgcaccctccgtaggccggataaggcgtttacgccgcatccggcaacagtgccaactgcctgatAAGACGCGCAAGCGTCGCATCAGGc                                                                             <  1:1856794‑M2/25‑1 (MQ=255)
                        ctacaaattcccgcaccctccgtaggccggataaggcgtttacgccgcatccggcaacagtgccaactgcctgatAAGACGCGCAAGCGTCGCATCAGGc                                                                             <  1:615916‑M2/25‑1 (MQ=255)
                        ctacaaattcccgcaccatccgtaggccggataaggcgtttacgccgcatccggcaacggtgccgactgcctgatAAGACGCGCAAGCGTCGCATCAGGc                                                                             <  1:2535358‑M2/25‑1 (MQ=255)
                        aGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGGGCAAGCGTCGCATCTgg                                                                              >  2:1646328/1‑99 (MQ=12)
                        aGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGc                                                                             <  2:326374/100‑1 (MQ=33)
                         gTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCa                                                                            >  2:88766/1‑100 (MQ=32)
                          ttGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAg                                                                           <  2:2080005/100‑1 (MQ=31)
                          acaaattcccgcaccctgcgtaggccggataaggcgtttacgccgcatccggcaacggtgccgactgcctgatAAGACGCGCAAGCGTCGCATCAGGCAg                                                                           <  2:608848‑M2/27‑1 (MQ=255)
                          acaaattcccgcaccctccgtaggccggataaggcgtttacgccgcatccggcaacagtgccaactgcctgatAAGACGCGCAAGCGTCGCATCAGGCAg                                                                           <  1:1423697‑M2/27‑1 (MQ=255)
                           tGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGt                                                                          <  1:2005650/100‑1 (MQ=11)
                           tGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGt                                                                          >  1:1559586/1‑100 (MQ=11)
                           caaattcccgcaccatccgtaggcctgataaggcgtttacgccgcatccggcaacggtgccgactgcctgatAAGACGCGCAAGCGTCGCATCAGGCAGt                                                                          <  1:2572932‑M2/28‑1 (MQ=255)
                             aattcccgcaccctccgtaggccggataaggcgtttacgccgcatccggcaacggtgccgactgcctgatAAGACGCGCAAGCGTCGCATCAGGCAGTCg                                                                        <  1:2325092‑M2/30‑1 (MQ=255)
                              attcccgcaccctccgtaggccggataaggcgtttacgccgcatccggcaacagtgccaactgcctgatAAGACGCGCAAGCGTCGCATCAGGcagttgn                                                                       <  1:2276216‑M2/31‑4 (MQ=255)
                               ttcccgcaccctccgtaggccggataaggcgtttacgccgcatccggcaacggtgccgactgcctgatAAGACGCGCAAGCGTCGCATCAGGCAGTCGGc                                                                      <  1:968384‑M2/32‑1 (MQ=255)
                                 cccgcgccctccgtaggccggataaggcgtttacgccgcatccggcaatggtgcagactgcctgatAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCAc                                                                    <  1:2214661‑M2/34‑1 (MQ=255)
                                                 gccggataaggcgtttacgccgcatccggcaacagtgccaactgcctgatAAGACGCGCAAGCGTCGCATCAGGCAGTTGGCACTGTTGCCGGATgcggc                                                    <  2:1481893‑M2/50‑1 (MQ=255)
                                                                           ggTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAg                          <  2:2111963/100‑1 (MQ=11)
                                                                           ggTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGCAAGCGCCTTATCCGGCTTACCGAg                          >  2:2560279/1‑100 (MQ=11)
                                                                            gTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGAg                          >  2:1698717/1‑99 (MQ=11)
                                                                            gTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAgg                         >  1:673678/1‑100 (MQ=31)
                                                                             tGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCACTCGGCAGCGTTGCCGGAGGCGGCGGAGACGCCTTGTGCGGCCTACGGAgg                         >  2:566673/1‑99 (MQ=11)
                                                                                gggAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACCGAGGGTGc                     >  2:1927352/1‑100 (MQ=12)
                                                                                 ggAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAggg                        <  2:1305091/96‑1 (MQ=32)
                                                                                 gataTTCGTCGGCCTGATCAGTCGCGCTAGCGTCCCCTCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCg                    <  2:2280564/97‑1 (MQ=11)
                                                                                  gAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCgg                   <  2:1140853/100‑1 (MQ=33)
                                                                                  gAATTGGTAGGCCTGATAAGACGCGCGAGCGTCGTATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGt                       <  2:536036/96‑1 (MQ=255)
                                                                                   aaTTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCggg                  >  2:2352584/1‑100 (MQ=32)
                                                                                    aTTTGTGGGCCCGATAGGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGTGTGCggg                  <  1:1370992/99‑1 (MQ=11)
                                                                                    aTTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGa                 >  1:1114468/1‑100 (MQ=33)
                                                                                    aTTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGa                 <  1:2535839/100‑1 (MQ=33)
                                                                                    aTTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGa                 <  2:1303244/100‑1 (MQ=33)
                                                                                     tttGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGaa                <  2:41314/100‑1 (MQ=33)
                                                                                      ttgtcggcacgatACGCCGCGGAAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAAt               <  2:1032071‑M2/87‑1 (MQ=255)
                                                                                       tGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGAGCGGCAAtt              >  2:2260820/1‑100 (MQ=12)
                                                                                        gTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAAttt             >  2:1693752/1‑100 (MQ=32)
                                                                                        gTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAAt               >  2:1495435/1‑98 (MQ=32)
                                                                                        gTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAAt               >  2:655194/1‑98 (MQ=32)
                                                                                         tgggCCGGATAAGGCGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAAtt              <  2:2468457/96‑1 (MQ=255)
                                                                                         tAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTg            <  1:791549/100‑1 (MQ=32)
                                                                                           ggCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGGTGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTg            >  2:2006748/1‑98 (MQ=17)
                                                                                           ggCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTa          <  2:2138405/100‑1 (MQ=32)
                                                                                           ggCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGCGCGGGCATTTGt           >  2:1835323/1‑99 (MQ=12)
                                                                                            gcctgatAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAAtt              <  2:1916184‑M2/88‑1 (MQ=255)
                                                                                            gcctgatAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAg         >  2:510090‑M2/8‑100 (MQ=255)
                                                                                            gcctgatAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAg         <  2:2199724‑M2/93‑1 (MQ=255)
                                                                                             cctgatAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAgg        <  2:1315749‑M2/94‑1 (MQ=255)
                                                                                             cctgatAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAgg        <  2:1170135‑M2/94‑1 (MQ=255)
                                                                                              ctgatAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGc       >  1:818235‑M2/6‑100 (MQ=255)
                                                                                               tgatAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTCTAGGcc      >  2:1403053‑M2/5‑100 (MQ=255)
                                                                                               tgatAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAgg        <  2:1170256‑M2/94‑1 (MQ=255)
                                                                                               tgatAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGcc      >  1:637757‑M2/5‑100 (MQ=255)
                                                                                               tgatAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGcc      <  1:2109160‑M2/96‑1 (MQ=255)
                                                                                               tgatAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGcc      <  2:2300053‑M2/96‑1 (MQ=255)
                                                                                               tgatAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGcc      <  2:2148006‑M2/96‑1 (MQ=255)
                                                                                                gatAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCt     <  2:833668‑M2/97‑1 (MQ=255)
                                                                                                 atAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTg    <  1:2566664‑M2/98‑1 (MQ=255)
                                                                                                 atAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTg    <  1:1324001‑M2/98‑1 (MQ=255)
                                                                                                  tAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGa   <  2:1343258‑M2/99‑1 (MQ=255)
                                                                                                   aaGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAACGCCTTAGCGGGGCTACGGAGGGTGCGGGGATGTATAGGCCTg    >  2:506333/1‑98 (MQ=11)
                                                                                                   aaGACGCACAGGCGTCCCATCAGGCAGTCGGCACCGCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGAt  <  1:2042166/100‑1 (MQ=11)
                                                                                                   |                                                                                                   
AGACGCGCAAGCGTCGCATCAGGCAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGAT  >  NC_000913/4326114‑4326312

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.