New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4586784 =125 (1.330)8 (0.090) 5/166 NT 6.8% intergenic (‑23/‑165) hsdR/mrr endonuclease R Type I restriction enzyme/methylated adenine and cytosine restriction protein
?NC_000913 4586809 = 103 (1.180)intergenic (‑48/‑140) hsdR/mrr endonuclease R Type I restriction enzyme/methylated adenine and cytosine restriction protein
Rejected: Frequency below cutoff threshold.

Only 100 of 140 total aligned reads displayed.

AAGTGAAGTCGTTGACGCCCTTCAGGAATTCAAAATTGGATTTATTCATCATTGTTATTAATCCATTGCTGTGCGGGCCTGTCCAAATATTTAAGGCCCATAACATCTCATCTTAGCTTTCTGTACCTTTCCGGGCAATGACCACGGTCACAGCAACTGACTCATTTCTAACGTGTTCGTCTATTTTTGTAGTGCT  >  NC_000913/4586710‑4586905
                                                                                                   |                                                                                                
aaGTGAAGTCGTTGACGCCCTTCAGGAATTCAAAATTGGATTTATTCATCATTGTTATTAATCCATTGCTGTGCGGGCCTGTCCAAATATTTAAGGCCCa                                                                                                  >  1:1386306/1‑100 (MQ=255)
 gttagaaatgagtcagttgctgtgaccgtggtcattgcccggaaaggtacagaaagctaagatgagatgttatGGGCCTGTCCAAATATTTAAGGCCCAt                                                                                                 >  1:1384382‑M1/74‑100 (MQ=255)
  ttagaaatgagtcagttggtgtggccgtggtcattgcctggaaaggtacagaaagctaagatgagatgttatGGGCCTGTCCAAATATTTAAGGCCCAt                                                                                                 >  2:2430338‑M1/73‑99 (MQ=255)
  ttagaaatgagtcagttgctgtgaccgtggtcattgcccggaaaggtacagaaagctaagatgagatgttatGGGCCTGTCCAAATATTTAAGGCCCATa                                                                                                >  2:11028‑M1/73‑100 (MQ=255)
  gTGAAGTCGTTGACGCCCTTTAGGAATTCAAAATTGGATTTATTCATCATTGTTATTAATCCATTGCTGTGCGGGCCTGTCCAAATATTTAAGGCCCATa                                                                                                >  1:480272/1‑100 (MQ=255)
    gAAGTCGTTGACGCCCTTCAGGAATTCAAAATTGGATTTATTCATCATTGTTATTAATCCATTGCTGTGCGGGCCTGTCCAAATATTTAAGGCCCATaa                                                                                               >  1:1020613/1‑99 (MQ=255)
    agaaatgagtcagttgctgtgaccgtggtcattgcccggaaaggtacagaaagctaagatgagatgttatGGGCCTGTCCAAATATTTAAGGCCCATAAc                                                                                              >  1:990837‑M1/71‑100 (MQ=255)
      aGTCGTTGACGCCCTTCAGGAATTCAAAATTGGATTTATTCATCATTGTTATTAATCCATTGCTGTGCGGGCCTGTCCAAATATTTAAGGCCCATAAcat                                                                                            <  2:36707/100‑1 (MQ=255)
       gTCGTTGACGCCCTTCAGGAATTCAAAATTGGATTTATTCATCATTGTTATTAATCCATTGCTGTGCGGGCCTGTCCAAATATTTAAGGCCCATAAcatc                                                                                           <  1:1449485/100‑1 (MQ=255)
       aatgagtcagttgctgtgaccgtggtcattgcccggaaaggtacagaaagctaagatgagatgttatGGGCCTGTCCAAATATTTAAGGCCCATAAcatc                                                                                           >  1:71354‑M1/68‑100 (MQ=255)
        tCGTTGACGCCCTTCAGGAATTCAAAATTGGATTTATTCATCATTGTTATTAATCCATTGCTGTGCGGGCCTGTCCAAATATTTAAGGCCCATAAcatct                                                                                          <  1:1885920/100‑1 (MQ=255)
         cGTTGACGCCCTTCAGGAATTCAAAATTGGATTTATTCATCATTGTTATTAATCCATTGCTGTGCGGGCCTGTCCAAATATTTAAGGCCCATAAcatctc                                                                                         <  2:1159018/100‑1 (MQ=255)
         cGTTGACGCCCTTCAGGAATTCAAAATTGGATTTATTCATCATTGTTATTAATCCATTGCTGTGCGGGCCTGTCCAAATATTTAAGGCCCATAAcatctc                                                                                         >  1:2323503/1‑100 (MQ=255)
         cGTTGACGCCCTTCAGGAATTCAAAATTGGATTTATTCATCATTGTTATTAATCCATTGCTGTGCGGGCCTGTCCAAATATTTAAGGCCCATAAcatctc                                                                                         >  1:1785772/1‑100 (MQ=255)
         cGTTGACGCCCTTCAGGAATTCAAAATTGGATTTATTCATCATTGTTATTAATCCATTGCTGTGCGGGCCTGTCCAAATATTTAAGGCCCATAAcatctc                                                                                         <  2:2249201/100‑1 (MQ=255)
            tGACGCCCTTCAGGAATTCAAAATTGGATTTATTCATCATTGTTATTAATCCATTGCTGTGCGGGCCTGTCCAAATATTTAAGGCCCATAAcatctcatc                                                                                      <  1:306351/100‑1 (MQ=255)
            tGACGCCCTTCAGGAATTCAAAATTGGATTTATTCATCATTGTTATTAATCCATTGCTGTGCGGGCCTGTCCAAATATTTAAGGCCCATAAcatctcatc                                                                                      <  2:1684523/100‑1 (MQ=255)
            gtcagttgctgtgaccgtggtcattgcccggaaaggtacagaaagctaagatgagatgttatGGGCCTGTCCAAATATTTAAGGCCCATAAcatctcatc                                                                                      >  1:2437403‑M1/63‑100 (MQ=255)
               cGCCCTTCAGGAATTCAAAATTGGATTTATTCATCATTGTTATTAATCCATTGCTGTGCGGGCCTGTCCAAATATTTAAGGCCCATAACATCTCATCTTa                                                                                   <  2:395412/100‑1 (MQ=255)
               cGCCCTTCAGGAATTCAAAATTGGATTTATTCATCATTGTTATTAATCCATTGCTGTGCGGGCCTGTCCAAATATTTAAGGCCCATAACATCTCATCTTa                                                                                   <  1:215231/100‑1 (MQ=255)
                gCCCTTCAGGAATTCAAAATTGGATTTATTCATCATTGTTATTAATCCATTGCTGTGCGGGCCTGTCCAAATATTTAAGGCCCATAACATCTCATCTTAg                                                                                  <  1:680726/100‑1 (MQ=255)
                gCCCTTCAGGAATTCAAAATTGGATTTATTCATCATTGTTATTAATCCATTGCTGTGCGGGCCTGTCCAAATATTTAAGGCCCATAACATCTCATCTTAg                                                                                  <  1:62535/100‑1 (MQ=255)
                gCCATTCAGGAATTCGAAATTGGATTTATTCATCATTTTTATTAATCCATTGCTGTGCGGGCCTGTCCAAAGATTTAAGGCCCATAACATCTCCTCTTAg                                                                                  <  2:1042172/100‑1 (MQ=255)
                  ccTTCAGGAATTCAAAATTGGATTTATTCATCATTGTTATTAATCCATTGCTGTGCGGGCCTGTCCAAATATTTAAGGCCCATAACATCTCATCTTAGCt                                                                                <  2:340060/100‑1 (MQ=255)
                  ccTTCAGGAATTCAAAATTGGATTTATTCATCATTGTTATTAATCCATTGCTGTGCGGGCCTGTCCAAATATTTAAGGCCCATAACATCTCATCTTAGCt                                                                                <  1:457205/100‑1 (MQ=255)
                   cTTCAGGAATTCAAAATTGGATTTATTCATCATTGTTATTAATCCATTGCTGTGCGGGCCTGTCCAAATATTTAAGGCCCATAACATCTCATCTTAGCtt                                                                               >  2:1971339/1‑100 (MQ=255)
                   cTTCAGGAATTCAAAATTGGATTTATTCATCATTGTTATTAATCCATTGCTGTGCGGGCCTGTCCAAATATTTAAGGCCCATAACATCTCATCTTAGCtt                                                                               <  2:759672/100‑1 (MQ=255)
                   cTTCAGGAATTCAAAATTGGATTTATTCATCATTGTTATTAATCCATTGCTGTGCGGGCCTGTCCAAATATTTAAGGCCCATAACATCTCATCTTAGCtt                                                                               >  1:243733/1‑100 (MQ=255)
                     tCAGGAATTCAAAATTGGATTTATTCATCATTGTTATTAATCCATTGCTGTGCGGGCCTGTCCAAATATTTAAGGCCCATAACATCTCATCTTAGCTTTc                                                                             <  1:76696/100‑1 (MQ=255)
                       aGGAATTCAAAATTGGATTTATTCATCATTGTTATTAATCCATTGCTGTGCGGGCCTGTCCAAATATTTAAGGCCCATAACATCTCATCTTAGCTTTCTg                                                                           <  1:2331988/100‑1 (MQ=255)
                        ggAATTCAAAATTGGATTTATTCATCATTGTTATTAATCCATTGCTGTGCGGGCCTGTCCAAATATTTAAGGCCCATAACATCTCATCTTAGCTTTCTGt                                                                          <  1:1368500/100‑1 (MQ=255)
                        ggAATTCAAAATTGGATTTATTCATCATTGTTATTAATCCATTGCTGTGCGGGCCTGTCCAAATATTTAAGGCCCATAACATCTCATCTTAGCTTTCTGt                                                                          <  1:622632/100‑1 (MQ=255)
                          aaTTCAAAATTGGATTTATTCATCATTGTTATTAATCCATTGCTGTGCGGGCCTGTCCAAATATTTAAGGCCCATAACATCTCATCTTAGCTTTCTGTa                                                                         <  1:2568428/99‑1 (MQ=255)
                          aaTTCAAAATTGGATTTATTCATCATTGTTATTAATCCATTGCTGTGCGGGCCTGTCCAAATATTTAAGGCCCATAACATCTCATCTTAGCTTTCTGTAc                                                                        <  2:2236737/100‑1 (MQ=255)
                          aaTTCAAAATTGGATTTATTCATCATTGTTATTAATCCATTGCTGTGCGGGCCTGTCCAAATATTTAAGGCCCATAACATCTCATCTTAGCTTTCTGTAc                                                                        <  2:815037/100‑1 (MQ=255)
                          aaTTAAAAATTGGATTTATTCATCATTGTTATTAATCCATTGCTGTGCGGGCCTGTCCAAATATTTAAGGCCCATAACATCTCATCTTAGCTTTCTGt                                                                          <  1:1499408/98‑1 (MQ=255)
                           aTTCAAAATTGGATTTATTCATCATTGTTATTAATCCATTGCTGTGCGGGCCTGTCCAAATATTTAAGGCCCATAACATCTCATCTTAGCTTTCTGTAcc                                                                       >  1:2199652/1‑100 (MQ=255)
                           aTTCAAAATTGGATTTATTCATCATTGTTATTAATCCATTACTGTGCGGGCCTTTCCAAATATTTAAGGCCCATAACATCTCATCTTAGCTTTCTg                                                                           >  2:1371581/1‑96 (MQ=255)
                              cAAAATTGGATTTATTCATCATTGTTATTAATCCATTGCTGTGCGGGCCTGTCCAAATATTTAAGGCCCATAACATCTCATCTTAGCTTTCTGTACCttt                                                                    <  2:1738789/100‑1 (MQ=255)
                                   ttGGATTTATTCATCATTGTTATTAATCCATTGCTGTGCGGGCCTGTCCAAATATTTAAGGCCCATAACATCTCATCTTAGCTTTCTGTACCTTTCCggg                                                               <  1:1564714/100‑1 (MQ=255)
                                    tGGATTTATTCATCATTGTTATTAATCCATTGCTGTGCGGGCCTGTCCAAATATTTAAGGCCCATAACATCTCATCTTAGCTTTCTGTACCTTTCCGGGc                                                              <  1:1098063/100‑1 (MQ=255)
                                    tGGATTTATTCATCATTGTTATTAATCCATTGCTGTGCGGGCCTGTCCAAATATTTAAGGCCCATAACATCTCATCTTAGCTTTCTGTACCTTTCCGGGc                                                              <  1:1350275/100‑1 (MQ=255)
                                      gATTTATTCATCATTGTTATTAATCCATTGCTGTGCGGGCCTGTCCAAATATTTAAGGCCCATAACATCTCATCTTAGCTTTCTGTACCTTTCCGGGCaa                                                            >  1:1779390/1‑100 (MQ=255)
                                       aTTTATTCATCATTGTTATTAATCCATTGCTGTGCGGGCCTGTCCAAATATTTAAGGCCCATAACATCTCATCTTAGCTTTCTGTACCTTTCCGGGCAAt                                                           >  1:1352259/1‑100 (MQ=255)
                                         ttATTCATCATTGTTATTAATCCATTGCTGTGCGGGCCTGTCCAAATATTTAAGGCCCATAACATCTCATCTTAGCTTTCTGTACCTTTCCGGGCAATGa                                                         <  2:1722522/100‑1 (MQ=255)
                                           aTTCATCATTGTTATTAATCCATTGCTGTGCGGGCCTGTCCAAATATTTAAGGCCCATAACATCTCATCTTAGCTTTCTGTACCTTTCCGGGCAATGAcc                                                       <  1:1627897/100‑1 (MQ=255)
                                            tccatcatTGTTATTAATCCATTGCTGTGCGGGCCTGTCCAAATATTTAAGGCCCATAACATCTCATCTTAGCTTTCTGTACCTTTCCGGGCAATGACCa                                                      <  1:1343760/98‑1 (MQ=255)
                                              catcatTGTTATTAATCCATTGCTGGGCGGGACTGTCCAATTATTTAGGGCCCAGAACATCTCGTCTTAGCTTTCTGTACCTTGCCGGGCAATGACCAc                                                     <  2:2415797/99‑1 (MQ=255)
                                               atcatTGTTATTAATCCATTGCTGTGCGGGCCTGTCCAAATATTTAAGGCCCATAACATCTCATCTTAGCTTTCTGTACCTTTCCGGGCAATGACCACgg                                                   <  1:2143172/100‑1 (MQ=255)
                                               atcatTGTTATTAATCCATTGCTGTGCGGGCCTGTCCAAATATTTAAGGCCCATAACATCTCATCTTAGCTTTCTGTACCTTTCCGGGCAATGACCACgg                                                   <  1:286314/100‑1 (MQ=255)
                                               atcatTGTTATTAATCCATTGCTGTGCGGGCCTGTCCAAATATTTAAGGCCCATAACATCTCATCTTAGCTTTCTGTACCTTTCCGGGCAATGACCACgg                                                   <  1:1770255/100‑1 (MQ=255)
                                                 catTGTTATTAATCCATTGCTGTGCGGGCCTGTCCAAATATTTAAGGCCCATAACATCTCATCTTAGCTTTCTGTACCTTTCCCGGCAATGACCACGGTc                                                 >  2:1520559/1‑100 (MQ=255)
                                                   ttGTTATTAATCCATTGCTGTGCGGGCCTGTCCAAATATTTAAGGCCCATAACATCTCATCTTAGCTTTCTGTACCTTTCCGGGCAATGACCACGGTcac                                               <  1:1738387/100‑1 (MQ=255)
                                                   ttGTTATTAATCCATTGCTGTGCGGGCCTGTCCAAATATTTAAGGCCCATAACATCTCATCTTAGCTTTCTGTACCTTTCCGGGCAATGACCACGGTcac                                               <  2:911330/100‑1 (MQ=255)
                                                    tGTTATTAATCCATTGCTGTGCGGGCCTGTCCAAATATTTAAGGCCCATAACATCTCATCTTAGCTTTCTGTACCTTTCCGGGCAATGACCACGGTcaca                                              <  1:835633/100‑1 (MQ=255)
                                                     gTTATTAATCCATTGCTGTGCGGGCCTGTCCAAATATTTAAGGCCCATAACATCTCATCTTAGCTTTCTGTACCTTTCCGGGCAATGACCACGGTCACAg                                             <  2:677363/100‑1 (MQ=255)
                                                     gTTATTAATCCATTGCTGTGCGGGCCTGTCCAAATATTTAAGGCCCATAACATCTCATCTTAGCTTTCTGTACCTTTCCGGGCAATGACCACGGTCACAg                                             >  2:2428940/1‑100 (MQ=255)
                                                        attaATCCATTGCTGTGCGGGCCTGTCCAAATATTTAAGGCCCATAACATCTCATCTTAGCTTTCTGTACCTTTCCGGGCAATGACCACGGTCACAGCaa                                          >  1:1745528/1‑100 (MQ=255)
                                                         ttaATCCATTGCTGTGCGGGCCTGTCCAAATATTTAAGGCCCATAACATCTCATCTTAGCTTTCTGTACCTTTCCGGGCAATGACCACGGTCACAGCAAc                                         >  2:1395073/1‑100 (MQ=255)
                                                         ttaATCCATTGCTGTGCGGGCCTGTCCAAATATTTAACGCCCATAACATCTCATCTTAGCTTTCTGTACCTTTCCGGGCAATGACCACGGTCACAGCAAc                                         >  2:1395238/1‑100 (MQ=255)
                                                          taATCCATTGCTGTGCGGGCCTGTCCAAATATTTAAGGCCCATAACATCTCATCTTAGCTTTCTGTACCTTTCCGGGCAATGACCACGGTCACAGCAACt                                        <  2:1654825/100‑1 (MQ=255)
                                                          taATCCATTGCTGTGCGGGCCTGTCCAAATATTTAAGGCCCATAACATCTCATCTTAGCTTTCTGTACCTTTCCGGGCAATGACCACGGTCACAGCAACt                                        <  2:1028818/100‑1 (MQ=255)
                                                          taATCCATTGCTGTGCGGGCCTGTCCAAATATTTAAGGCCCATAACATCTCATCTTAGCTTTCTGTACCTTTCCGGGCAATGACCACGGTCACAGCAACt                                        <  2:590935/100‑1 (MQ=255)
                                                           aaTCCATTGCTGTGCGGGCCTGTCCAAATATTTAAGGCCCATAACATCTCATCTTAGCTTTCTGTACCTTTCCGGGCAATGACCACGGTCACAGCAACTg                                       <  2:1300570/100‑1 (MQ=255)
                                                           aaTCCATTGCTGTGCGGGCCTGTCCAAATATTTAAGGCCCATAACATCTCATCTTAGCTTTCTGTACCTTTCCGGGCAATGACCACGGTCACAGCAACTg                                       <  1:1857005/100‑1 (MQ=255)
                                                            aTCCATTGCTGTGCGGGCCTGTCCAAATATTTAAGGCCCATAACATCTCATCTTAGCTTTCTGTACCTTTCCGGGCAATGACCACGGTCACAGCAACTGa                                      >  1:2423744/1‑100 (MQ=255)
                                                            aTCCATTGCTGTGCGGGCCTGTCCAAATATTTAAGGCCCATAACATCTCATCTTAGCTTTCTGTACCTTTCCGGGCAATGACCACGGTCACAGCAACTGa                                      <  1:2428865/100‑1 (MQ=255)
                                                             tCCATTGCTGTGCGGGCCTGTCCAAATATTTAAGGCCCATAACATCTCATCTTAGCTTTCTGTACCTTTCCGGGCAATGACCACGGTCACAGCAACTGAc                                     <  1:81275/100‑1 (MQ=255)
                                                             tCCATTGCTGTGCGGGCCTGTCCAAATATTTAAGGCCCATAACATCTCATCTTAGCTTTCTGTACCTTTCCGGGCAATGACCACGGTCACAGCAACTGAc                                     <  1:1145272/100‑1 (MQ=255)
                                                             tCCATTGCTGTGCGGGCCTGTCCAAATATTTAAGGCCCATAACATCTCATCTTAGCTTTCTGTACCTTTCCGGGCAATGACCACGGTCACAGCAACTGAc                                     <  1:1681945/100‑1 (MQ=255)
                                                             gatgagatgttatgggccttaaatatttggacaggcccATAACATCTCATCTTAGCTTTCTGTACCTTTCCGGGCAATGACCACGGTCACAGCAACTGAc                                     >  1:2437403‑M2/39‑100 (MQ=255)
                                                                aTTGCTGTGCGGGCCTGTCCAAATATTTAAGGCCCATAACATCTCATCTTAGCTTTCTGTACCTTTCCGGGCAATGACCACGGTCACAGCAACTGACTCa                                  >  2:1492591/1‑100 (MQ=255)
                                                                  gatgttatgggccttaaatatttggacaggcccATAACATCTCATCTTAGCTTTCTGTACCTTTCCGGGCAATGACCACGGTCACAGCAACTGACTCAtt                                >  1:1152608‑M2/34‑100 (MQ=255)
                                                                   gCTGTGCGGGCCTGTCCAAATATTTAAGGCCCATAACATCTCATCTTAGCTTTCTGTACCTTTCCGGGCAATGACCACGGTCACAGCAACTGACTCAttt                               >  2:336610/1‑100 (MQ=255)
                                                                    cTGTGCGGGCCTGTCCAAATATTTAAGGCCCATAACATCTCATCTTAGCTTTCTGTACCTTTCCGGGCAATGACCACGGTCACAGCAACTGACTCATTTc                              <  2:2199640/100‑1 (MQ=255)
                                                                     gttatgggccttaaatatttggacaggcccATAACATCTCATCTTAGCTTTCTGTACCTTTCCGGGCAATGACCACGGTCACAGCAACTGACTCATTTCt                             >  2:1063895‑M2/31‑100 (MQ=255)
                                                                     gttatgggccttaaatatttggacaggcccATAACATCTCATCTTAGCTTTCTGTACCTTTCCGGGCAATGACCACGGTCACAGCAACTGACTCATTTCt                             >  1:990837‑M2/31‑100 (MQ=255)
                                                                       tatgggccttaaatatttggacaggcccATAACATCTCATCTTAGCTTTCTGTACCTTTCCGGGCAATGACCACGGTCACAGCAACTGACTCATTTCTaa                           >  2:11028‑M2/29‑100 (MQ=255)
                                                                        atgggccttaaatatttggacaggcccATAACATCTCATCTTAGCTTTCTGTACCTTTCCAGGCAATGACCACGGCCACACCAACTGACTCATTTCTaa                           >  2:2430338‑M2/28‑99 (MQ=255)
                                                                         cGGGCCTGTCCAAATATTTAAGGCCCATAACATCTCATCTTAGCTTTCTGTACCTTTCCGGGCAATGACCACGGTCACAGCAACTGACTCATTTCTAACg                         <  2:1438109/100‑1 (MQ=255)
                                                                          GGGCCTGTCCAAATATTTAAGGCCCATAACATCTCATCTTAGCTTTCTGTACCTTTCCGGGCAATGACCACGGTCACAGCAACTGACTCATTTCTAACgt                        <  2:2073011‑M1/100‑1 (MQ=255)
                                                                           GGCCTGTCCAAATATTTAAGGCCCATAACATCTCATCTTAGCTTTCTGTACCTTTCCGGGCAATGACCACGGTCACAGCAACTGACTCATTTCTAACgtg                       <  1:66569‑M1/100‑1 (MQ=255)
                                                                           GGCCTGTCCAAATATTTAAGGCCCATAACATCTCATCTTAGCTTTCTGTACCTTTCCGGGCAATGACCACGGTCACAGCAACTGACTCATTTCTAACgtg                       >  2:2351986‑M1/1‑100 (MQ=255)
                                                                               TGTCCAAATATTTAAGGCCCATAACATCTCATCTTAGCTTTCTGTACCTTTCCGGGCAATGACCACGGTCACAGCAACTGACTCATTTCTAACGTGTTCg                   >  1:97741‑M1/1‑100 (MQ=255)
                                                                               TGTCCAAATATTTAAGGCCCATAACATCTCATCTTAGCTTTCTGTACCTTTCCGGGCAATGACCACGGTCACAGCAACTGACTCATTTCTAACGTGTTCg                   >  2:598857‑M1/1‑100 (MQ=255)
                                                                                   cAAATATTTAAGGCCCATAACATCTCATCTTAGCTTTCTGTACCTTTCCGGGCAATGACCACGGTCACAGCAACTGACTCATTTCTAACGTGTTCGTCTa               >  1:1609216/1‑100 (MQ=255)
                                                                                   cAAATATTTAAGGCCCATAACATCTCATCTTAGCTTTCTGTACCTTTCCGGGCAATGACCACGGTCACAGCAACTGACTCATTTCTAACGTGTTCGTCTa               >  2:1159445/1‑100 (MQ=255)
                                                                                   cAAATATTTAAGGCCCATAACATCTCATCTTAGCTTTCTGTACCTTTCCGGGCAATGACCACGGTCACAGCAACTGACTCATTTCTAACGTGTTCGTCTa               >  1:778573/1‑100 (MQ=255)
                                                                                   cAAATATTTAAGGCCCATAACATCTCATCTTAGCTTTCTGTACCTTTCCGGGCAATGACCACGGTCACAGCAACTGACTCATTTCTAACGTGTTCGTCTa               >  2:621757/1‑100 (MQ=255)
                                                                                    aaaTATTTAAGGCCCATAACATCTCATCTTAGCTTTCTGTACCTTTCCGGGCAATGACCACGGTCACAGCAACTGACTCATTTCTAACGTGTTCGTCTAt              <  2:1785763/100‑1 (MQ=255)
                                                                                     aaTATTTAAGGCCCATAACATCTCATCTTAGCTTTCTGTACCTTTCCAGGCAATTACCACGGTCACAGCAACTGACTCATTTCTAACGTGTTCGTCTAtt             >  1:894017/1‑100 (MQ=255)
                                                                                      atatTTAAGGCCCATCACATCTCATCTTAGCTTTCTGTACCTTTCCGGGCAATGACCACGGTCACAGCAACTGACTCATTTCTAACGTGTTCGTCTAttt            <  1:2562057/100‑1 (MQ=255)
                                                                                      atatTTAAGGCCCATAACATCTCATCTTAGCTTTCTGTACCTTTCCGGGCAATGACCACGGTCACAGCAACTGACTCATTTCTAACGTGTTCGTCTAttt            <  1:1239057/100‑1 (MQ=255)
                                                                                      atatTTAAGGCCCATAACATCTCATCTTAGCTTTCTGTACCTTTCCGGGCAATGACCACGGTCACAGCAACTGACTCATTTCTAACGTGTTCGTCTAttt            <  2:54818/100‑1 (MQ=255)
                                                                                       tatTTAAGGCCCATAACATCTCATCTTAGCTTTCTGTACCTTTCCGGGCAATGACCACGGTCACAGCAACTGACTCATTTCTAACGTGTTCGTCTAtttt           <  1:17586/100‑1 (MQ=255)
                                                                                         tttAAGGCCCATAACATCTCATCTTAGCTTTCTGTACCTTTCCGGGCAATGACCACGGTCACAGCAACTGACTCATTTCTAACGTGTTCGTCTATTTTTg         <  2:1296092/100‑1 (MQ=255)
                                                                                          ttAAGGCCCATAACATCTCATCTTAGCTTTCTGTACCTTTCCGGGCAATGACCACGGTCACAGCAACTGACTCATTTCTAACGTGTTCGTCTATTTTTGt        <  1:2045792/100‑1 (MQ=255)
                                                                                              ggcccATAACATCTCATCTTAGCTTTCTGTACCTTTCCGGGCAATGACCACTGTCACAGCAACTGACTCATTTCTAACGTGTTCGTCTATTTTTGTAGTg    >  1:350286‑M2/6‑100 (MQ=255)
                                                                                               gcccATAACATCTCATCTTAGCTTTCGGTACCTTTCCGGGCAATGACCACGGTCACAGCAACTGACTCATTTCTAACGTGTTCGTCTATTTTTGTAGTGc   >  1:1584198‑M2/5‑100 (MQ=255)
                                                                                                cccATAACATCTCATCTTAGCTTTCTGTACCTTTCCGGGCAATGACCACGGTCACAGCAACTGACTCATTTCTAACGTGTTCGTCTATTTTTGTAGTGCt  <  1:1481443‑M2/97‑1 (MQ=255)
                                                                                                   |                                                                                                
AAGTGAAGTCGTTGACGCCCTTCAGGAATTCAAAATTGGATTTATTCATCATTGTTATTAATCCATTGCTGTGCGGGCCTGTCCAAATATTTAAGGCCCATAACATCTCATCTTAGCTTTCTGTACCTTTCCGGGCAATGACCACGGTCACAGCAACTGACTCATTTCTAACGTGTTCGTCTATTTTTGTAGTGCT  >  NC_000913/4586710‑4586905

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.