New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 463633096 (1.020)8 (0.090) 7/164 NT 7.6% coding (324/690 nt) creB response regulator in two‑component regulatory system with CreC
?NC_000913 = 4636367 107 (1.240)coding (361/690 nt) creB response regulator in two‑component regulatory system with CreC
Rejected: Frequency below cutoff threshold.

Only 100 of 131 total aligned reads displayed.

CGATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCA  >  NC_000913/4636270‑4636462
                                                                                                 |                                                                                               
cGATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCgg                                                                                               >  1:716842‑M2/1‑98 (MQ=255)
 gATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCggg                                                                                              <  2:2544018‑M2/100‑4 (MQ=255)
 gATCGCCTGCTTGGGCTGGAAATTGGTGCGGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCggg                                                                                              >  2:1416349‑M2/1‑97 (MQ=255)
 gATCGCCAGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGAGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCggn                                                                                              >  2:1396414‑M2/1‑97 (MQ=255)
  aTCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCgggt                                                                                             <  2:198546‑M2/100‑5 (MQ=255)
  aTCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCgggt                                                                                             >  1:1149398‑M2/1‑96 (MQ=255)
  aTCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCgggt                                                                                             >  2:1189457‑M2/1‑96 (MQ=255)
  aTCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCggg                                                                                              <  2:264580‑M2/99‑4 (MQ=255)
     gCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCgggtgaa                                                                                          <  2:1294934‑M2/100‑8 (MQ=255)
     gCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCgggtgaa                                                                                          <  2:455845‑M2/100‑8 (MQ=255)
       cTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTgaaga                                                                                        <  1:1468150/100‑1 (MQ=255)
         gCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGaagaag                                                                                      >  1:749472/1‑100 (MQ=255)
         gCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGaagaag                                                                                      <  2:2486448/100‑1 (MQ=255)
           ttGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGtt                                                                                    >  1:925401/1‑100 (MQ=255)
            tGGGCTGGAAATTGTTGCTGACGACTACGTGGCTATACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGGACCTTACTGCGTCGGGTGAAGAAGTtc                                                                                   <  2:1806335/100‑1 (MQ=255)
             gggCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTtct                                                                                  <  2:443745/100‑1 (MQ=255)
              ggCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTtctc                                                                                 <  2:2502562/100‑1 (MQ=255)
              ggCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTtctc                                                                                 >  2:588650/1‑100 (MQ=255)
               gCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCg                                                                                >  2:1045179/1‑100 (MQ=255)
                cTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGa                                                                               >  2:1544429/1‑100 (MQ=255)
                  ggAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACg                                                                             >  2:202877/1‑100 (MQ=255)
                   gcaaTTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGc                                                                            >  1:1760191/3‑100 (MQ=255)
                    aaaTTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGcc                                                                           <  1:2197894/100‑1 (MQ=255)
                         ggTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGtctc                                                                      >  2:2564356/1‑100 (MQ=255)
                          gTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTcc                                                                     >  1:1179482/1‑100 (MQ=255)
                          gTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTcc                                                                     <  2:1179477/100‑1 (MQ=255)
                          gTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTcc                                                                     <  1:2516731/100‑1 (MQ=255)
                           tGCTGACGACTACGTGGCTAAACCGTGTTCACCCCGCGAAGTGTGCGCGAGGGTGCGCGCCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTcc                                                                     <  2:885214/99‑1 (MQ=255)
                            gCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCg                                                                   <  2:2416282/100‑1 (MQ=255)
                            gCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCAGTCTCCCg                                                                   >  1:530623/1‑100 (MQ=255)
                             cTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGt                                                                  >  2:2304673/1‑100 (MQ=255)
                              tGACGACTACGTGGCTAAACCGTTTTCACCGCGCGAAGTGTGCGCCAGGGTGCGCAGCTTACTGCGTCGGGTGTAGACGTTCTGGACGCCGTCTTCCGTc                                                                 >  2:2117089/1‑100 (MQ=255)
                              tGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTc                                                                 >  2:76441/1‑100 (MQ=255)
                              tGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTc                                                                 >  2:1354216/1‑100 (MQ=255)
                              tGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTc                                                                 >  1:224327/1‑100 (MQ=255)
                               gacgacTAAGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGCGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCg                                                                   >  2:1087617/1‑97 (MQ=255)
                                   acTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCg                                                            <  1:2273783/100‑1 (MQ=255)
                                    cTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGt                                                           >  2:2463011/1‑100 (MQ=255)
                                     tACGTGGCTAAACCGGTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTa                                                          <  1:2564369/100‑1 (MQ=255)
                                          ggCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGa                                                     <  1:1883348/100‑1 (MQ=255)
                                          ggCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCAGTCATCCGTATTGGa                                                     >  1:2561105/1‑100 (MQ=255)
                                           cttAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGAc                                                    <  1:43649/98‑1 (MQ=255)
                                            cTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACa                                                   >  1:2253885/1‑100 (MQ=255)
                                             tAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACag                                                  >  2:43649/1‑99 (MQ=255)
                                             tAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACAt                                                  >  2:1819313/1‑100 (MQ=255)
                                               aaCCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACAttt                                                >  1:2310914/1‑100 (MQ=255)
                                               aaCCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACAttt                                                >  1:605858/1‑100 (MQ=255)
                                                aCCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACAtttt                                               <  1:47288/100‑1 (MQ=255)
                                                aCCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACAtttt                                               >  1:880201/1‑100 (MQ=255)
                                                aCCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACAtttt                                               <  1:535579/100‑1 (MQ=255)
                                                 ccGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTttg                                              >  1:933730/1‑100 (MQ=255)
                                                  cGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCgggtgaaaacggtttagccacgtagtcgtcagcaccaatttccagcccaagc                                             <  1:785504‑M2/100‑53 (MQ=255)
                                                   gTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCgggtgaaaacggtttagccacgtagtcgtcagcaccaatttccagcccaagca                                            <  1:2369910‑M2/100‑54 (MQ=255)
                                                      ttCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGAGGCCGGCTCCCGTCATCCGTATTGGACATTttgaattg                                         <  2:895619/100‑1 (MQ=255)
                                                       tCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTttgaattga                                        >  1:1939102/1‑100 (MQ=255)
                                                        cACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCgggtgaaaacggtttagccacgtagtcttcagcaccaatttccagcccaagcaggcga                                       <  2:1883919‑M2/100‑59 (MQ=255)
                                                        cACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTttgaattgaa                                       >  1:1297979/1‑100 (MQ=255)
                                                        cACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTttgaattgaa                                       <  1:252400/100‑1 (MQ=255)
                                                          ccccGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCgggtgaaaacggtttagccacgtagtcgtcagcaccaatttccagcccaagcaggcgatc                                     <  1:1424452‑M2/100‑61 (MQ=255)
                                                          ccccGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCgggtgaaaacggtttagccacgtagtcgtcagcaccaatttccagcccaagcaggcgatc                                     <  1:2066275‑M2/100‑61 (MQ=255)
                                                          ccccGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATtgaatg                                     >  1:957346/1‑100 (MQ=255)
                                                          ccccGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATtgaatg                                     <  1:971345/100‑1 (MQ=255)
                                                           nccGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATtgaatga                                    >  1:308394/2‑100 (MQ=255)
                                                           cccGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATtgaatg                                     >  2:1216423/1‑99 (MQ=255)
                                                           cccGCGAAGTGGACGCCAGGGTGCGCACCTTACTACTGCGGGTGAATAAGTTCTCGACACCGTCTCCCGACATCCGTATTGGACATTTTGAATtgaatg                                     >  2:1554286/1‑99 (MQ=255)
                                                            ccGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATtgaatgaa                                   >  2:1720373/1‑100 (MQ=255)
                                                             cgcgAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAAc                                  <  1:444058/100‑1 (MQ=255)
                                                             cgcgAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAAc                                  >  2:2078448/1‑100 (MQ=255)
                                                             cgcgAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAAc                                  <  2:1946660/100‑1 (MQ=255)
                                                                  aGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCcgcg                             >  2:191120/1‑100 (MQ=255)
                                                                   gtgtGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCgcgg                            >  1:1762312/1‑100 (MQ=255)
                                                                    tgtgCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCgcggc                           <  1:2304686/100‑1 (MQ=255)
                                                                       gcgcCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCa                        >  2:1059277/1‑100 (MQ=255)
                                                                       gcgcCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCa                        >  1:1076204/1‑100 (MQ=255)
                                                                         gcCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGa                      >  2:1010500/1‑100 (MQ=255)
                                                                           cAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATc                    <  1:1059282/100‑1 (MQ=255)
                                                                           cAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATc                    <  1:2519898/100‑1 (MQ=255)
                                                                              ggTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGc                 <  1:1283295/100‑1 (MQ=255)
                                                                              ggTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGc                 >  1:1824131/1‑100 (MQ=255)
                                                                               gTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCt                >  1:1916791/1‑100 (MQ=255)
                                                                                   gcACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGtt            <  2:933516/100‑1 (MQ=255)
                                                                                   gcACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGtt            >  1:2118337/1‑100 (MQ=255)
                                                                                   gcACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGtt            <  1:2429766/100‑1 (MQ=255)
                                                                                   gcACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGtt            <  2:1541181/100‑1 (MQ=255)
                                                                                   gcACCTTACTGCGGCGGGTGAAGAGGTTCGCGACGGCGTCTCCCGTCATCCGTATGGGACATTTTGAATTTAAGGAACCCGCTGCGCGGATCAGCTGGtt            <  2:1642019/100‑1 (MQ=255)
                                                                                    cACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGttt           <  2:1498538/100‑1 (MQ=255)
                                                                                    cACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGttt           <  2:1882193/100‑1 (MQ=255)
                                                                                    cACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGttt           <  1:1397952/100‑1 (MQ=255)
                                                                                    cACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGttt           >  2:697732/1‑100 (MQ=255)
                                                                                    cACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGttt           >  1:1528455/1‑100 (MQ=255)
                                                                                     aCCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTg          <  2:2012187/100‑1 (MQ=255)
                                                                                     aCCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTg          <  1:1524264/100‑1 (MQ=255)
                                                                                      ccTTACTGCGTCGGGTGAAGAAGTTCTCGACGGCGTCTCACGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGa         <  2:1824122/100‑1 (MQ=255)
                                                                                      ccTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGa         >  1:1016051/1‑100 (MQ=255)
                                                                                      ccTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGa         <  1:740643/100‑1 (MQ=255)
                                                                                       cTTACTGCGGCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGac        <  2:316729/100‑1 (MQ=255)
                                                                                        ttACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGac        <  2:317470/99‑1 (MQ=255)
                                                                                         ttcTGCGTCGGGTTAAGAAGTCCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGAGGCGCAGATCAGCTGGTTTGacac      <  2:2148166/98‑1 (MQ=255)
                                                                                          aCTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACg     >  1:1669815/1‑100 (MQ=255)
                                                                                             gCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCa  <  1:1544438/100‑1 (MQ=255)
                                                                                                 |                                                                                               
CGATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCA  >  NC_000913/4636270‑4636462

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.