| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 61,175 | (T)5→4 | coding (2090/2907 nt) | rapA ← | RNA polymerase remodeling/recycling factor ATPase; RNA polymerase‑associated, ATP‑dependent RNA translocase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 61,171 | 0 | T | . | 92.3% | 297.9 / 22.7 | 79 | coding (2094/2907 nt) | rapA | RNA polymerase remodeling/recycling factor ATPase; RNA polymerase‑associated, ATP‑dependent RNA translocase |
| Reads supporting (aligned to +/- strand): ref base T (1/5); new base . (38/34); total (40/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.00e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GTCCTGATTGATACCGATAATATCGAACAGGTTCATGGCGAAGGCGATCAGGTTGGTATCGTCATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGCTTTTTCGCCACCGTTGGAGTGGATTTCCAGCAGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCAGCGCTTCATGTTGCTCGCGGCAGTTTTTGAT > NC_000913/61072‑61266 | gTCCTGATTGATACCGATAATATCGAACAGGTTCATGGCGAAGGCGATCAGGTTGGTATCGTCATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGCt > 2:163013/1‑100 (MQ=255) ccTGATTGATACCGATAATATCGAACAGGTTCATGGCGAAGGTGATCAGGTTGGTATCGTCATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGCttt < 1:545931/100‑1 (MQ=255) ccTGATTGATACCGATAATATCGAACAGGTTCATGGCGAAGGCGATCAGGTTGGTATCGTCATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGCttt > 1:415940/1‑100 (MQ=255) cTGATTGATACCGATAATATCGAACAGGTTCATGGCGAAGGCGATCAGGTTGGTATCGTCATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGCtttt > 1:1614897/1‑100 (MQ=255) cTGATTGATACCGATAATATCGAACAGGTTCATGGCGAAGGCGATCAGGTTGGTATCGTCATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGCtttt > 1:236305/1‑100 (MQ=255) gattgatACCGATAATATCGAACAGGTTCATGGCGAAGGCGATCAGGTTGGTATCGTCATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGCttttcg < 1:1065502/100‑3 (MQ=255) gattgatACCGATAATATCGAACAGGTTCATGGCGAAGGCGATCAGGTTGGTATCGTCATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGCTTTTTc < 1:329968/100‑1 (MQ=255) attgatACCGATAATATCGAACAGGTTCATGGCGAAGGCGATCAGGTTGGTATCGTCATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGCttttcgc > 1:840432/1‑97 (MQ=255) attgatACCGATAATATCGAACAGGTTCATGGCGAAGGCGATCAGGTTGGTATCGTCATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGCttttcgc < 2:579174/100‑4 (MQ=255) gatACCGATAATATCGAACAGGTTCATGGCGAAGGCGATCAGGTTGGTATCGTCATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGC‑TTTTCGCCAc > 2:1664818/1‑100 (MQ=255) atACCGATAATATCGAACAGGTTCATGGCGAAGGCGATCAGGTTGGTATCGTCATCCTGCTCTTCAATTCTTTCTGCCAGTGCCTGGGC‑TTTTCGCCAc < 1:1056435/99‑1 (MQ=255) tACCGATAATATCGAACAGGTTCATGGCGAAGGCGATCAGGTTGGTATCGTCATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGC‑TTTTCGCCACCg > 2:1131443/1‑100 (MQ=255) tACCGATAATATCGAACAGGTTCATGGCGAAGGCGATCAGGTTGGTATCGTCATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGC‑TTTTCGCCACCg > 2:857321/1‑100 (MQ=255) ccGATAATATCGAACAGGTTCATGGCGAAGGCGATCAGGTTGGTATCGTCATTCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGC‑TTTTCGCCACCGtt > 1:560327/1‑100 (MQ=255) taataTCGAACAGGTTCATGGCGAAGGCGATCAGGTTGGTATCGTCATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGC‑TTTTCGCCACCGTTGGAg < 2:1326505/100‑1 (MQ=255) atatCGAACAGGTTCATGGCGAAGGCGATCAGGGTGGTATCGTCATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGG‑TTTTTCGCCACCGTTGGAGTg < 1:191928/100‑1 (MQ=255) tatCGAACAGGTTCATGGCGAAGGCGATCAGGTTGGTATCGTCATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGC‑TTTTCGCCACCGTTGGAGTgg < 1:992464/100‑1 (MQ=255) atCGAACAGGTTCATGGCGAAGGCGATCAGGTTGGTATCGTCATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGC‑TTTTCGCCACCGTTGGAGTGGa < 2:1757533/100‑1 (MQ=255) atCGAACAGGTTCATGGCGAAGGCGATCAGGTTGGTATCGTCATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGC‑TTTTCGCCACCGTTGGAGTGGa > 2:916283/1‑100 (MQ=255) tCGAACAGGTTCATGGCGCAGGCGATCAGGTTGGTATCGTCATCCTGCTCTTCAATGATTTCTGCCAGTGCCTGGGC‑TTTTCGCCACCGTTGTAGTGGAt < 1:888791/100‑1 (MQ=255) cGAACAGGTTCATGGCGAAGGCGATCAGGTTGGTATCGTCATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGC‑TTTTCGCCACCGTTGGAGTGGAtt > 2:1454900/1‑100 (MQ=255) gAACAGGTTCATGGCGAAGGCGATCAGGTTGGTATCGTCATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGC‑TTTTCGCCACCGTTGGAGTGGAttt > 2:267024/1‑100 (MQ=255) aCAGGTTCATGGCGAAGGCGATCAGGTTGGTATCGTCATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGC‑TTTTCGCCACCGTTGGAGTGGATTTcc < 2:394617/100‑1 (MQ=255) aCAGGTTCATGGCGAAGGCGATCAGGTTGGTATCGTCATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGC‑TTTTCGCCACCGTTGGAGTGGATTTcc < 1:774109/100‑1 (MQ=255) cAGGTTCATGGCGAAGGCGATCAGGTTGGTATCGTCATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGC‑TTTTCGCCACCGTTGGAGTGGATTTCca < 1:1183817/100‑1 (MQ=255) aGGTTCATGGCGAAGGCGATCAGGTTGGTATCGTCATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGC‑TTTTCGCCACCGTTGGAGTGGATTTCcag < 1:617898/100‑1 (MQ=255) ggTTCATGGCGAAGGCGATCAGGTTGGTATCGTCATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGC‑TTTTCGCCACCGTTGGAGTGGATTTCcagc > 1:916606/1‑100 (MQ=255) gTTCATGGCGAAGGCGATCAGGTTGGTATCGTCATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGC‑TTTTCGCCACCGTTGGAGTGGATTTCcagca < 1:1664807/100‑1 (MQ=255) tCATGGCGAAGGCGATCAGGTTTGTATCGTCATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGCTTTTTCGCCACCGTTGGAGTGGATTTCcagcag < 1:567418/100‑1 (MQ=255) tCATGGCGAAGGCGATCAGGTTGGTATCGTCATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGC‑TTTTCGCCACCGTTGGAGTGGATTTCCAGCAgg < 2:1079298/100‑1 (MQ=255) tGGCGAAGGCGATCAGGTTGGTATCGTCATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGC‑TTTTCGCCACCGTTGGAGTGGATTTCCAGCAGGCgg < 1:1810435/100‑1 (MQ=255) gCGAAGGCGATCAGGTTGGTATCGTCATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGC‑TTTTCGCCACCGTTGGAGTGGATTTCCAGCAGGCGGTc > 1:936838/1‑100 (MQ=255) cGAAGGCGATCAGGTTGGTATCGTCATCCTGCTATTCAATGCTTTCTGCAAGTGCCTGGGC‑TTTTCGCCACCGTTGGAGAGGATTTCCAGCAGGCGGTCa > 1:74142/1‑100 (MQ=255) aaGGCGATCAGGTTGGTATCGTCATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGC‑TTTTCGCCACCGTTGGAGTGGATTTCCAGCAGGCGGTCACg < 2:138204/100‑1 (MQ=255) aaGGCGATCAGGTTGGTATCGTCATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGC‑TTTTCGCCACCGTTGGAGTGGATTTCCAGCAGGCGGTCACg < 2:137747/100‑1 (MQ=255) aaGGCGATCAGGTTGGTATCGTCATCCGGCTCTTCAATCCTTTCTGCCAGTGCCTGGGC‑TTTTCGCCACCGTTGGAGTGGATTTCCAGCAGGCGGTCACg < 2:896546/100‑1 (MQ=255) ggCGATCAGGTTGGTATCGTCATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGC‑TTTTCGCCACCGTTGGAGTGGATTTCCAGCAGGCGGTCACGAc < 1:469483/100‑1 (MQ=255) cGATCAGGTTGGTATCGTCATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGC‑TTTTCGCCACCGTTGGAGTGGATTTCCAGCAGGCGGTCACGAccc > 2:1740570/1‑100 (MQ=255) cGATCAGGTTGGTATCGTCATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGC‑TTTTCGCCACCGTTGGAGTGGATTTCCAGCAGGCGGTCACGAccc < 1:49476/100‑1 (MQ=255) gATCAGGTTGGTATCGTCATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGC‑TTTTCGCCACCGTTGGAGTGGATTTCCAGCAGGCGGTCACGACCCt > 2:1518363/1‑100 (MQ=255) gATCAGGTTGGTATCGTCATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGC‑TTTTCGCCACCGTTGGAGTGGATTTCCAGCAGGCGGTCACGACCCt > 2:305907/1‑100 (MQ=255) ggTTGGTATCGTCATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGC‑TTTTCGCCACCGTTGGAGTGGATTTCCAGCAGGCGGTCACGACCCTGTTcc > 1:1528300/1‑100 (MQ=255) ggTTGGTATCGTCATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGC‑TTTTCGCCACCGTTGGAGTGGATTTCCAGCAGGCGGTCACGACCCTGTTcc > 1:397034/1‑100 (MQ=255) gTTGGTATCGTCATCCTGCTCTTCTATGCTTTCTGCCAGTGCCTGGG‑TTTTTCGCCACCGTTGGAGTGGATTTCCAGCAGGCGGTCACGACCCTGTTcc < 2:1063485/99‑1 (MQ=255) gTTGGTATCGTCATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGC‑TTTTCGCCACCGTTGGAGTGGATTTCCAGCAGGCGGTCACGACCCTGTTCCa < 1:585944/100‑1 (MQ=255) ttGGTATCGTCATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGC‑TTTTCGCCACCGTTGGAGTGGATTTCCAGCAGGCGGTCACGACCCTGTTCCAg > 2:725119/1‑100 (MQ=255) ggTATCGTCATCCTTCTCTTCAATGCTTTCTGGTAGTGCCTGGG‑ATTTTCGCCACCGTTGGAGGGGATTTCCAGCAGGCGGTCACGAGCCTGTTCCAGc > 1:1461504/1‑99 (MQ=255) gTATCGTCATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGC‑TTTTCGCCACCGTTGGAGTGGATTTCCAGCAGGCGGTCACGACCCTGTTCCAGCtg < 1:1410781/100‑1 (MQ=255) gTATCGTCATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGC‑TTTTCGCCACCGTTGGAGTGGATTTCCAGCAGGCGGTCACGACCCTGTTACAGCtg > 1:20476/1‑100 (MQ=255) aTCGTCATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGC‑TTTTCGCCACCGTTGGAGTGGATTTCCAACAGGCGGTCACGACCCTGTTCCAGCtgtg > 2:1488927/1‑100 (MQ=255) tCGTCATCCTGCTCTTCAATGCTTTCTGCAAGTGCCTGGGC‑TTTTCGCCACCGTTGGAGTGGATTTCCAGCAGGCGGTCACGACCCTGTTCCAGCTGTGc > 1:1042434/1‑100 (MQ=255) cGTCATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGC‑TTTTCGCCACCGTTGGAGTGGATTTCCAGCAGGCGGTCACGACCCTGTTCCAGCTGTGCt > 1:892702/1‑100 (MQ=255) gTCATCCTTCTCTTCAATGCTTTCTGCCAGTGCCTGGGC‑TTTTCGCCACCGTTGGAGTGGATGTCCAGCAGGCGGTCACGACCCTGTTCCAGCTGTGCtt < 1:493362/100‑1 (MQ=255) gTCATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGC‑TTTTCGCCACCGTTGGAGTGGATTTCCAGCAGGCGGTCACGACCCTGTTCCAGCTGTGCtt > 2:1258957/1‑100 (MQ=255) tCATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGC‑TTTTCGCCACCGTTGGAGTGGATTTCCAGCAGGCGGTCACGACCCTGTTCCAGCTGTGCttt < 2:1147423/100‑1 (MQ=255) cATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGC‑TTTTCGCCACCGTTGGAGTGGATTTCCAGCAGGCGGTCACGACCCTGTTCCAGCTGTGCTTTc < 1:186345/100‑1 (MQ=255) cATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGC‑TTTTCGCCACCGTTGGAGTGGATTTCCAGCAGGCGGTCACGACCCTGTTCCAGCTGTGCTTTc < 2:1674817/100‑1 (MQ=255) cATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGC‑TTTTCGCCACCGTTGGAGTGGATTTCCAGCAGGCGGTCACGACCCTGTTCCAGCTGTGCTTTc < 2:709114/100‑1 (MQ=255) tCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGC‑TTTTCGCCACCGTTGGAGTGGATTTCCAGCAGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCAg > 2:95645/1‑100 (MQ=255) ccTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGC‑TTTTCGCCACCGTTGGAGTGGATTTCCAGCAGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCAgc < 1:36259/100‑1 (MQ=255) cTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGC‑TTTTCGCCACCGTTGGAGTGGATTTCCAGCAGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCAgcg > 1:802400/1‑100 (MQ=255) gCTCTTCAATGCTTTCTGCCAGTGCCTGGGC‑TTTTCGCCACCGTTGGAGTGGATTTCCAGCAGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCAGCGCt > 2:616713/1‑100 (MQ=255) ctTCAATGCTTTCTGCCAGTGCCTGGGC‑TTTTCGCCAGCGTTGGAGTGGATTTCCAGCAGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCAGCGCTTCa > 1:974561/1‑100 (MQ=255) ctTCAATGCTTTCTGCCAGTGCCTGGGC‑TTTTCGCCACCGTTGGAGTGGATTTCCAGCAGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCAGCGCTTCa < 2:1446995/100‑1 (MQ=255) ctTCAATGCTTTCTGCCAGTGCCTGGGC‑TTTTCGCCACCGTTGGAGTGGATTTCCAGCAGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCAGCGCTTCa > 2:732493/1‑100 (MQ=255) ttCACTGCTTTCTGCCAGTGCCTGGGC‑TTTTCGCCACCGTTGGAGTGGATTTCCAGCAGGCGGTCACGACTCTGTTCCAGCTGTGCTTTCAGCGCTTCa < 1:1711670/99‑1 (MQ=255) tCAATGCTTTCTGCCAGTGCCTGGGC‑TTTTCGCCACCGTTGGAGTGGATTTCCAGCAGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCAGCGCTTCATg < 1:301279/100‑1 (MQ=255) tCAATGCTTTCTGCCAGTGCCTGGGC‑TTTTCGCCACCGTTGGAGTGGATTTCCAGCAGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCAGCGCTTCATg < 2:916612/100‑1 (MQ=255) tCAATGCTTTCTGCCAGTGCCTGGGC‑TTTTCGCCACCGTTGGAGTGGATTTCCAGCAGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCAGCGCTTCATg > 1:507395/1‑100 (MQ=255) cAATGCTTTCTGCCAGTGCCTGGGC‑TTTTCGCCACCGTTGGAGTGGATTTCCAGCAGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCAGCGCTTCATGt < 2:571056/100‑1 (MQ=255) cAATGCTTTCTACCAGTGCCTGGGC‑TTTTCGCCACCGTTGGAGTGGATTTCCAGCAGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCAGCGCTTCATGt > 1:792785/1‑100 (MQ=255) aaTGCTTTCTGCCAGTGCCTGGGC‑TTTTCGCCACCGTTGGAGTGGATTTCCAGCAGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCAGCGCTTCATGtt > 1:1819521/1‑100 (MQ=255) aaTGCTTTCTGCCAGTGCCTGGGC‑TTTTCGCCACCGTTGGAGTGGATTTCCAGCAGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCAGCGCTTCATGtt > 2:1373027/1‑100 (MQ=255) aTGCTTTCTGCCAGTGCCTGGGC‑TTTTCGCCACCGTTGGAGTGGATTTCCAGCAGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCAGCGCTTCATGTTg > 2:1240008/1‑100 (MQ=255) tGCTTTCTGCCAGTGCCTGGGC‑TTTTCGCCACCGTTGGAGTGGATTTCCAGCAGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCAGCGCTTCATGTTGc < 1:559097/100‑1 (MQ=255) cTTTCTGCCAGTGCCTGGGC‑TTTTCGCCACCGTTGGAGTGGATTTCCAGCAGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCAGCGCTTCATGTTGCt > 1:55063/1‑99 (MQ=255) cTTTCTGCCAGTGCCTGGGC‑TTTTCGCCACCGTTGGAGTGGATTTCCAGCAGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCAGCGCTTCATGTTGCTc > 1:631940/1‑100 (MQ=255) ttCTGCCAGTGCCTGGGC‑TTTTCGCCACCGTTGGAGTGGATTTCCAGCAGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCAGCGCTTCATGTTGCTcgc > 2:579933/1‑100 (MQ=255) tCTGCCAGTGCCTGGG‑TTTTTCGTCACCGTTGGAGTGGATTTCCAGCAGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCAGCGCTTCATGTTGCTcgcg < 2:309060/100‑1 (MQ=255) cTGCCAGTGCCTGGGC‑TTTTCGCCACCGTTGGAGTGGATTTCCAGCAGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCAGCGCTTCATGTTGCTCGCgg < 2:487453/100‑1 (MQ=255) gCCAGTGCCTGGGC‑TTTTCGCCACCGTTGGAGTGGATTTCCAGCAGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCAGCGCTTAATGTTGCTcgcg > 2:450498/1‑97 (MQ=255) cAGTGCCTGGGC‑TTTTCGCCACCGTTGGAGTGGATTTCCAGCAGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCAGCGCTTCATGTTGCTCGCGGCAGt > 1:962185/1‑100 (MQ=255) tGCCTGGGC‑TTTTCGCCACCGTTGGAGTGGATTTCCAGCAGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCAGCGCTTCATGTTGCTCGCGGCAGtttt < 1:822848/100‑1 (MQ=255) ccTGGGCTTTTTCGCCACCGTTGGAGTGGATTTCCAGCAGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCAGCGCTTCATGTTGCTCGCGGCAGttttt > 2:925629/1‑100 (MQ=255) cTGGGC‑TTTTCGCCACCGTTGGAGTGGATTTCCAGCAGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCAGCGCTTCATGTTGCTCGCGGCAGTTTTTGa > 1:678958/1‑100 (MQ=255) cTGGGC‑TTTTCGCCACCGTTGGAGTGGATTTCCAGCAGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCAGCGCTTCATGTTGCTCGCGGCAGTTTTTGa < 2:943273/100‑1 (MQ=255) tGGGC‑TTTTCGCCACCGTTGGAGTGGATTTCCAGCAGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCAGCGCTTCATGTTGCTCGCGGCAGTTTTTGAt > 2:377054/1‑100 (MQ=255) | GTCCTGATTGATACCGATAATATCGAACAGGTTCATGGCGAAGGCGATCAGGTTGGTATCGTCATCCTGCTCTTCAATGCTTTCTGCCAGTGCCTGGGCTTTTTCGCCACCGTTGGAGTGGATTTCCAGCAGGCGGTCACGACCCTGTTCCAGCTGTGCTTTCAGCGCTTCATGTTGCTCGCGGCAGTTTTTGAT > NC_000913/61072‑61266 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |