| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 432,193 | +G | intergenic (‑180/+119) | tsx ← / ← yajI | nucleoside channel, receptor of phage T6 and colicin K/putative lipoprotein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 432,189 | 1 | . | G | 91.2% | 261.1 / 20.4 | 81 | intergenic (‑176/+123) | tsx/yajI | nucleoside channel, receptor of phage T6 and colicin K/putative lipoprotein |
| Reads supporting (aligned to +/- strand): ref base . (4/3); new base G (41/32); total (45/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
AGGAGCCTATTATAAAAATCATTGCTCACAAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGC‑G‑G‑G‑G‑ATTGTACTGACTTTCGCCCTTGTTGCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGAT > NC_000913/432090‑432277 | aggagCCTATTATAAAAATCATTGCTCACAAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTcgggc < 1:319065/100‑1 (MQ=255) ggagCCTATTATAAAAATCATTGCTCACAAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTcgggc‑g > 2:1301166/1‑100 (MQ=255) gCCTATTATAAAAATCATTGCTCACAAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGC‑g‑g‑g‑g < 2:89169/100‑1 (MQ=255) gCCTATTATAAAAATCATTGCTCACAAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGC‑g‑g‑g‑g < 1:30215/100‑1 (MQ=255) gCCTATTATAAAAATCATTGCTCACAAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGC‑g‑g‑g‑g < 1:1368226/100‑1 (MQ=255) gCCTATTATAAAAATCATTGCTCACAAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGC‑g‑g‑g‑g > 1:1319997/1‑100 (MQ=255) gCCTATTATAAAAATCATTACTCACAAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGC‑g‑g‑g‑g < 1:774495/100‑1 (MQ=255) ccTATTATAAAAATCATTGCTCACAAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGC‑g‑g‑g‑gg < 1:1031423/100‑2 (MQ=255) tattatAAAAATCATTGCTCACAAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGC‑g‑g‑g‑ggat < 1:855041/100‑4 (MQ=255) tattatAAAAATCATTGCTCACAAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGC‑g‑g‑g‑ggat > 1:1203428/1‑97 (MQ=255) tattatAAAAATCATTGCTCACAAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGC‑g‑g‑g‑ggat < 1:959758/100‑4 (MQ=255) cgatctaaaaTCATTGCTCACAAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGC‑g‑g‑g‑ggatt < 2:1095770/94‑5 (MQ=255) tataAAAATCATTGCTCACAAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGG‑G‑G‑G‑ATTGt > 1:1311572/1‑100 (MQ=255) taAAAATCATTGCTCACAAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGG‑G‑G‑G‑ATTGTAc > 1:352267/1‑100 (MQ=255) aaaaaTCATTGCTCACAAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGG‑G‑G‑G‑ATTGTACt > 2:227204/1‑100 (MQ=255) aaaaTCATTGCTCACAAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGG‑G‑G‑G‑ATTGTACTg < 2:1311582/100‑1 (MQ=255) aaaaTCATTGCTCACAAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGG‑G‑G‑G‑ATTGTACTg > 2:140927/1‑100 (MQ=255) aaaaTCATTGCTCACAAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGC‑g‑g‑g‑ggattagatcg > 1:1095760/1‑90 (MQ=255) aaaaTCATTGCTCACAAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGC‑G‑G‑G‑G‑ATTGTACTGa < 1:385691/100‑1 (MQ=255) aaaaTCATTGCTCACAAAAATATGTTTCGTTTCACAGTTCCATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGG‑G‑G‑G‑ATTGTACTg > 2:1357599/1‑100 (MQ=255) aaaTCATTGCTCACAAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGG‑G‑G‑G‑ATTGTACTGa < 1:1179366/100‑1 (MQ=255) tccgatctacaAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGG‑G‑G‑G‑ATTGTACTGACttt < 2:485482/92‑1 (MQ=255) cATTGCTCACAAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGG‑G‑G‑G‑ATTGTACTGACttt > 1:842148/1‑100 (MQ=255) aTTGCTCACAAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGG‑G‑G‑G‑ATTGTACTGACTTTc > 2:678703/1‑100 (MQ=255) tcttCACAAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGG‑G‑G‑G‑ATTGTACTGACTTTCGc < 1:782447/97‑1 (MQ=255) gCTCACAAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGG‑G‑G‑G‑ATTGTACTGACTTTCGcc > 1:181954/1‑100 (MQ=255) cTCACAAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGG‑G‑G‑G‑ATTGTACTGACTTTCGccc < 2:311263/100‑1 (MQ=255) tgacaAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGC‑G‑GTG‑G‑ATTGTACTGACTTTCGCCCt < 1:1720060/98‑1 (MQ=255) tCACAAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGG‑G‑G‑G‑ATTGTACTGACTTTCGCCCt < 2:1022014/100‑1 (MQ=255) tCACAAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACAAATTCGCGCGG‑G‑G‑G‑ATTGTACTGACTTTCGcaga > 2:782452/1‑97 (MQ=255) cacaAAAATATGTTTAGTTTCAAAGTTCTATCATTTACATAATCAATTAAGTTCACGTTTACACACAATCGGGCGG‑G‑G‑G‑AATGGACGGACTTTCGCCCt > 1:1253287/1‑99 (MQ=255) acaAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGG‑G‑G‑G‑ATTGTACTGACtttagatcgga > 1:485479/1‑92 (MQ=255) aaaaaTATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACCCACATTCGGGC‑G‑G‑GAG‑ATAGTACTAACTTTCTCCCt > 2:1616975/1‑96 (MQ=255) aaaaaTATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGG‑G‑G‑G‑ATTGTACTGACTTTCGCCCttgtt < 2:769940/100‑1 (MQ=255) aaaaTATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGG‑G‑G‑G‑ATTGTACTGACTTTCGCCCttgttg < 1:961235/100‑1 (MQ=255) aaaaTATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGG‑G‑G‑G‑ATTGTACTGACTTTCGCCCttgttg < 1:385248/100‑1 (MQ=255) aaaTATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGG‑G‑G‑G‑ATTGTACTGACTTTCGCCCTTGTTGc < 2:361544/100‑1 (MQ=255) aaaTATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGG‑G‑G‑G‑ATTGTACTGACTTTCGCCCTTGTTGc < 1:85990/100‑1 (MQ=255) gtttcgtttcACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGG‑G‑G‑G‑ATTGTACTGACTTTCGCCCTTGTTGCAAACt > 2:1658540/1‑99 (MQ=255) gtttcgtttcACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCCGGCGG‑G‑G‑G‑ATTGTACTGACTTTCGCCCTTGTTGCAAACt > 1:1068080/1‑99 (MQ=255) tttcgtttcACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGG‑G‑G‑G‑ATTGTACTGACTTTCGCCCTTGTTGCAAACttt < 1:254630/100‑1 (MQ=255) tttcgtttcACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGG‑G‑G‑G‑ATTGTACTGACTTTCGCCCTTGTTGCAAACttt > 1:934249/1‑100 (MQ=255) ttcgtttcACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGG‑G‑G‑G‑ATTGTACTGACTTTCGCCCTTGTTGCAAACtttt < 1:347816/100‑1 (MQ=255) gtttcACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGG‑G‑G‑G‑ATTGTACTGACTTTCGCCCTTGTTGCAAACTTTTACt < 2:1083430/100‑1 (MQ=255) ttcACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGG‑G‑G‑G‑ATTGTACTGACTTTCGCCCTTGTTGCAAACTTTTACTAt > 2:1476536/1‑100 (MQ=255) ttcACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGC‑GAG‑G‑G‑ATTGTACTGACTTTCGCCCTTGTTGCAAACTTTTACTAt > 2:27826/1‑100 (MQ=255) caGTTCTATCATTTACGTAATCGATTGCTTTCACGTTTACACACATTCGGTCTG‑G‑T‑G‑ATTTTACTTACTTTCGCCCTTGTTGCAAACTTTTACTATCAAt < 1:1099539/100‑1 (MQ=255) caGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGG‑G‑G‑G‑ATTGTACTGACTTTCGCCCTTGTTGCAAACTTTTACTATCAAt > 1:1552600/1‑100 (MQ=255) caGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGG‑G‑G‑G‑ATTGTACTGACTTTCGCCCTTGTTGCAAACTTTTACTATCAAt > 1:1555711/1‑100 (MQ=255) gTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGG‑G‑G‑G‑ATTGTACTGACTTTCGCCCTTGTTGCAAACTTTTACTATCAATcc < 2:778990/100‑1 (MQ=255) cTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCTGGCGG‑G‑G‑G‑ATTGTACTGACTTTCGCCCTTGTTGCAAACTTTTACTATCAATCCAgg < 1:600393/100‑1 (MQ=255) cTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGG‑G‑G‑G‑ATTGTACTGACTTTCGCCCTTGTTGCAAACTTTTACTATCAATCCAgg > 2:1523261/1‑100 (MQ=255) cTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGG‑G‑G‑G‑ATTGTACTGACTTTCGCCCTTGTTGCAAACTTTTACTATCAATCCAgg > 1:188357/1‑100 (MQ=255) cTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGG‑G‑G‑G‑ATTGTACTGACTTTCGCCCTTGTTGCAAACTTTTACTATCAATCCAgg < 1:1623481/100‑1 (MQ=255) tATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGG‑G‑G‑G‑ATTGTACTGACTTTCGCCCTTGTTGCAAACTTTTACTATCAATCCAgg > 2:556655/1‑99 (MQ=255) aTCGTTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGG‑G‑G‑G‑ATTGTACTGACTTTCGCCCTTGTTGCAAACTTTTACTATCAATCCAGGtn < 1:1452947/100‑2 (MQ=255) aTCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGG‑G‑G‑G‑ATTGTACTGACTTTCGCCCTTGTTGCAAACTTTTACTATCAATCCAGGTg > 2:12830/1‑100 (MQ=255) tCATTTACTTAATCTATTGCGTTCACGTTTATACACATTCAATC‑G‑G‑GAG‑ATTGTACTGACTTTCGCCCTTGTTGCAAACTTTTACTATCAATCCAGGTGa < 2:109418/100‑1 (MQ=255) tCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGG‑G‑G‑G‑ATTGTACTGACTTTCGCCCTTGTTGCAAACTTTTACTATCAATCCAGGTGa > 2:1051759/1‑100 (MQ=255) tCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGG‑G‑G‑G‑ATTGTACTGACTTTCGCCCTTGTTGCAAACTTTTACTATCAATCCAGGTGa < 1:591660/100‑1 (MQ=255) cATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGG‑G‑G‑G‑ATTGTACTGACTTTCGCCCTTGTTGCAAACTTTTACTATCAATCCAGGTGAt > 1:1639505/1‑100 (MQ=255) cATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGG‑G‑G‑G‑ATTGTACTGACTTTCGCCCTTGTTGCAAACTTTTACTATCAATCCAGGTGAt > 2:1386228/1‑100 (MQ=255) tttACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGG‑G‑G‑G‑ATTGTACTGACTTTCGCCCTTGTTGCAAACTTTTACTATCAATCCAGGTGATGt < 2:1403498/100‑1 (MQ=255) tttACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGG‑G‑G‑G‑ATTGTACTGACTTTCGCCCTTGTTGCAAACTTTTACTATCAATCCAGGTGATGt < 2:250251/100‑1 (MQ=255) ttACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGG‑G‑G‑G‑ATTGTACTGACTTTCGCCCTTGTTGCAAACTTTTACTATCAATCCAGGTGATGTa < 1:573661/100‑1 (MQ=255) tACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGG‑G‑G‑G‑ATTGTACTGACTTTCGCCCTTGTTGCAAACTTTTACTATCAATCCAGGTGATGTaa > 1:1634052/1‑100 (MQ=255) cGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGG‑G‑G‑G‑ATTGTACTGACTTTCGCCCTTGTTGCAAACTTTTACTATCAATCCAGGTGATGTAAGc < 1:138452/100‑1 (MQ=255) tAATCGATTGCGTTCACGTTTACACACATTCGGGCGG‑G‑G‑G‑ATTGTACTGACTTTCGCCCTTGTTGCAAACTTTTACTATCAATCCAGGTGATGTAAGCag > 1:314000/1‑100 (MQ=255) tAATCGATTGCGTTCACGTTTACACACATTCGGGCGG‑G‑G‑G‑ATTGTACTGACTTTCGCCCTTGTTGCAAACTTTTACTATCAATCCAGGTGATGTAAGCag > 1:118295/1‑100 (MQ=255) aTCGATTGCGTTCACGTTTACACACATTCGGGCGG‑G‑G‑G‑ATTGTACTGACTTTCGCCCTTGTTGCAAACTTTTACTATCAATCCAGGTGATGTAAGCagag > 1:1648442/1‑100 (MQ=255) aTCGATTGCGTTCACGTTTACACACATTCGGGCGG‑G‑G‑G‑ATTGTACTGACTTTCGCCCTTGTTGCAAACTTTTACTATCAATCCAGGTGATGTAAGCagag < 2:1085452/100‑1 (MQ=255) cGATTGCGTTCACGTTTACACACATTCGGGCGG‑G‑G‑G‑ATTGTACTGACTTTCGCCCTTGTTGCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTa > 1:816613/1‑100 (MQ=255) cGATTGCGTTCACGTTTACACACATTCGGGCGG‑G‑G‑G‑ATTGTACTGACTTTCGCCCTTGTTGCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTa < 1:1357589/100‑1 (MQ=255) gATTGCGTTCACGTTTACACACATTCGGGCGG‑G‑G‑G‑ATTGTACTGACTTTCGCCCTTGTTGCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTaa > 2:31222/1‑100 (MQ=255) aTTTCGTTCACGTGTACACACATTCGGGC‑G‑G‑G‑GTAGTGTACTGACTTGCGCCCTTGTTTCAAACTTTTACTATCAATGCAGGTGATGTAAGCAGATTAAc > 1:534920/1‑100 (MQ=255) ttGCGTTCACGTTTACACACATTCGGGCGG‑G‑G‑G‑ATTGTACTGACTTTCGCCCTTGTTGCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACa < 2:876431/100‑1 (MQ=255) tGCGTTCACGTTTACACACATTCGGGCGG‑G‑G‑G‑ATTGTACTGACTTTCGCCCTTGTTGCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACaa < 2:842154/100‑1 (MQ=255) gCGTTCACGTTTACACACATTCGGGCGG‑G‑G‑G‑ATTGTACTGACTTTCGCCCTTGTTGCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACaaa > 2:568658/1‑100 (MQ=255) cGTTCACGTTTACACACATTCGGGCGG‑G‑G‑G‑ATTGTACTGACTTTCGCCCTTGTTGCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACaaaa > 1:546575/1‑100 (MQ=255) cGTTCACGTTTACACACATTCGGGCGG‑G‑G‑G‑ATTGTACTGACTTTCGCCCTTGTTGCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACaaaa > 2:92981/1‑100 (MQ=255) cGTTCACGTTTACACACATTCGGGCGG‑G‑G‑G‑ATTGTACTGACTTTCGCCCTTGTTGCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACaaaa > 1:1796585/1‑100 (MQ=255) tCACGTTTACACACATTCGGGCGG‑G‑G‑G‑ATTGTACTGACTTTCGCCCTTGTTGCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGa > 1:649697/1‑100 (MQ=255) cACGTTTACACACATTCGGGCGG‑G‑G‑G‑ATTGTACTGACTTTCGCCCTTGTTGCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGa > 1:1109132/1‑99 (MQ=255) cACGTTTACACACATTCGGGC‑G‑G‑G‑G‑ATTGTACTGACTTTCGCCCTTGTTGCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACg > 2:1034716/1‑100 (MQ=255) cGTTTACACACATTCGGGCGG‑G‑G‑G‑ATTGTACTGACTTTCGCCCTTGTTGCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACgg < 2:352269/100‑1 (MQ=255) cGTTTACACACATTCGGGCGG‑G‑G‑G‑ATTGTACTGACTTTCGCCCTTGTTGCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACgg < 1:1487720/100‑1 (MQ=255) cGTTTACACACATTCGGGCGG‑G‑G‑G‑ATTGTACTGACTTTCGCCCTTGTTGCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACgg < 2:181954/100‑1 (MQ=255) gTTTACACACATTCGGGCGG‑G‑G‑G‑ATTGTACTGACTTTCGCCCTTGTTGCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACggg < 1:87326/100‑1 (MQ=255) gTTTACACACATTCGGGCGG‑G‑G‑G‑ATTGTACTGACTTTCGCCCTTGTTGCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACggg < 2:1214680/100‑1 (MQ=255) tACACACATTCGGGCGG‑G‑G‑G‑ATTGTACTGACTTTCGCCCTTGTTGCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGaa > 1:1366538/1‑100 (MQ=255) acacacATTCGGGCGG‑G‑G‑G‑ATTGTACTGACTTTCGCCCTTGTTGCAAACTTTTACTATCAATCCAGATGATGTAAGCAGAGTAACAAAATGACGGTGaaa > 1:526448/1‑100 (MQ=255) cacacaTTCGGGCGG‑G‑G‑G‑ATTGTACTGACTTTCGCCCTTGTTGCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAg > 2:1281482/1‑100 (MQ=255) cacacaTTCGGGCGG‑G‑G‑G‑ATTGTACTGACTTTCGCCCTTGTTGCAAACTTTTACTATCAATCAAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAg > 1:530373/1‑100 (MQ=255) cacaTTCGGGCGG‑G‑G‑G‑ATTGTACTGACTTTCGCCCTTGTTGCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGAt > 2:631744/1‑100 (MQ=255) | AGGAGCCTATTATAAAAATCATTGCTCACAAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGC‑G‑G‑G‑G‑ATTGTACTGACTTTCGCCCTTGTTGCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATGACGGGGAAAGAT > NC_000913/432090‑432277 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |