| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 107,553 | (T)9→8 | 100% | intergenic (+79/‑152) | lpxC → / → secM | UDP‑3‑O‑acyl N‑acetylglucosamine deacetylase/regulator of secA translation |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 107,545 | 0 | T | . | 85.5% | 260.3 / 48.5 | 83 | intergenic (+71/‑160) | lpxC/secM | UDP‑3‑O‑acyl N‑acetylglucosamine deacetylase/regulator of secA translation |
| Reads supporting (aligned to +/- strand): ref base T (8/4); new base . (34/37); total (42/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.50e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.71e-01 | |||||||||||
TCAAAGCGCCTTCAGCTGTACTGGCATAACGACATTTATACTGTCGTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑TTTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAGCACTTTTCCGCACAACTTATCTTCATTCGTGCTGTGGAC > NC_000913/107446‑107640 | tCAAAGCGCCTTCAGCTGTACTGGCATAACGACATTTATACTGTCGTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑t > 2:1429707/1‑100 (MQ=255) cAAAGCGCCTTCAGCTGTACTGGCATAACGACATTTATACTGTCGTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑tt < 1:1009465/100‑1 (MQ=255) cAAAGCGCCTTCAGCTGTACTGGCATAACGACATTTATACTGTCGTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑tt > 2:1116847/1‑100 (MQ=255) cAAAGCGCCTTCAGCTGTACTGGCATAACGACATTTATACTGTCGTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑tt > 1:1345562/1‑100 (MQ=255) aaGCGCCTTCAGCTGTACTGGCATAACGACATTTATACTGTCGTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑tttt > 2:2171302/1‑100 (MQ=255) aGCGCCTTCAGCTGTACTGGCATAACGACATTTATACTGTCGTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑ttttt < 1:572634/100‑1 (MQ=255) aGCGCCTTCAGCTGTACTGGCATAACGACATTTATACTGTCGTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑ttttt > 1:113426/1‑100 (MQ=255) gcgcCTTCAGCTGTACTGGCATAACGACATTTATACTGTCGTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑tttttt < 1:1894346/100‑1 (MQ=255) gcCTTCAGCTGTACTGGCATAACGACATTTATACTGTCGTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑tttttttt > 2:933592/1‑100 (MQ=255) ccTTCAGCTGTACTGGCATAACGACATTTATACTGTCGTATAAAATTCGACTGGCAAATCTGGTACTCTCTCCGGCCAGGTGAACCAGTCG‑ttttttttg > 1:1629728/1‑99 (MQ=255) cTTCAGCTGTACTGGCATAACGACATTTATACTGTCGTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑ttttttttga > 1:901426/1‑98 (MQ=255) ttCAGCTGTACTGGCATAACGACATTTATACTGTCGTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑ttttttttgaa < 2:929486/100‑4 (MQ=255) ttCAGCTGTACTGGCATAACGACATTTATACTGTCGCATAAAATTCTACTGTCAAATCTTGCACTCTCACCGGCCAGGTGAACCAGTCG‑ttttttttgaa < 2:1310651/100‑4 (MQ=255) tCAGCTGTACTGGCATAACGACATTTATACTGTCGTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑TTTTTTTTTGaa < 1:251577/100‑1 (MQ=255) gCTGTACTGGCATAACGACATTTATACTGTCGTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑TTTTTTTTTGAAttt > 1:2175239/1‑100 (MQ=255) gCTGTACTGGCATAACGACATTTATACTGTCGTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAAtttt > 1:1267086/1‑100 (MQ=255) gCTGTACTGGCATAACGACATTTATACTGTCGTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAAtttt < 2:928171/100‑1 (MQ=255) cTGTACTGGCATAACGACATTTATACTGTCGTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTta < 2:1555690/100‑1 (MQ=255) cTGTACTGGCATAACGACATTTATACTGTCGTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTta > 1:766359/1‑100 (MQ=255) tGTACTGGCATAACGACATTTATACTTTCGTATAAAATTCGACTTGCATTTCTTTCTTTCTCTCTTGTCAGTTGATCCAGTCG‑‑TTTTTTTTGAATTTtat < 2:1377467/100‑1 (MQ=255) tGTACTGGCATAACGACATTTATACTGTCGTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTtat > 1:264052/1‑100 (MQ=255) ttccgatctaCGACATTTATACTGTCGTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAag < 2:1655688/91‑1 (MQ=255) cTGGCATAACGACATTTATACTGTCGTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAaga > 2:1628002/1‑100 (MQ=255) tGGCATAACGACATTTATACTGTCGTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAagag < 1:1282788/100‑1 (MQ=255) tGGCATAACGACATTTATACTGTCGTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAagag < 1:50181/100‑1 (MQ=255) ggCATAACGACATTTATACTGTCGTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGc > 2:1662277/1‑100 (MQ=255) gCATAACGACATTTATACTGTCGTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCGTTTTTTTTTTGAATTTTATAagag < 2:1898866/100‑1 (MQ=255) aTAACGACATTTATACTGTCGTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑TTTTTTTTT‑TTTTTTATAACAGCtat > 2:2032486/1‑100 (MQ=255) aaCGACATTTTTCCGGTCGTATAAAATTCGACTGGCAAATTTGGCATTCTCTCCGGCGAGGTGAACCGGTCG‑‑TTTTTTTTGAATTTTATAAGAGCta < 2:615617/97‑1 (MQ=255) aaCGACATTTATACTGTCGTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCtata < 1:2084376/99‑1 (MQ=255) aCGACATTTATACTGTCGTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAagagatcggaa > 1:1655699/1‑93 (MQ=255) aCGACATTTATACTGTCGTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATaaa > 1:359420/1‑100 (MQ=255) cGACATTTATACTGTCGTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAATATCTATaaaa > 1:1993632/1‑100 (MQ=255) cATTTATACTGTCGTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAAc < 1:218331/100‑1 (MQ=255) cATTTATACTGTAGTATAAAATTCGACTGGCAAATCTTGCACTCTCTCCGGCAAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAAc < 2:2021100/100‑1 (MQ=255) aTTTATACTGTCGTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑TTTTTTTTT‑TTTTTTTTAAAAGCTaaaaaa > 2:558940/1‑96 (MQ=255) aTTTATACTGTCGTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAAc < 1:507951/99‑1 (MQ=255) aTTTATACTGTCGTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAACg > 2:1507789/1‑100 (MQ=255) tttATACTGTCGTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAACgg > 1:278246/1‑100 (MQ=255) tttATACTGTCGTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTAAATTTTATAAGAGCTATAAAAAACgg > 1:1832388/1‑100 (MQ=255) ttatacgacagTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGt > 2:733529/11‑100 (MQ=255) ttATACTGTCGGATAAAATTCGATTGGTAATTCTAGCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGt < 2:163453/100‑1 (MQ=255) tataCTGTCGTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTg < 1:682013/100‑1 (MQ=255) ataCTGTCGTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGc < 1:829747/100‑1 (MQ=255) ataCTGTCATATAAAATTCGACTGGCAAATCTGGAACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGc < 1:829953/100‑1 (MQ=255) cTGTCGTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGaa > 1:320608/1‑100 (MQ=255) gTCGTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACg > 1:72632/1‑100 (MQ=255) gTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTg > 1:425189/1‑100 (MQ=255) tataAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGt > 1:74382/1‑100 (MQ=255) ataAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGtt > 1:1391814/1‑100 (MQ=255) taAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGttt < 2:467358/100‑1 (MQ=255) taAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGttt > 1:1113516/1‑100 (MQ=255) aaTTCGACTGGCAAATCTGGTACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCt < 2:1582367/100‑1 (MQ=255) aaTTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑TTTTTTTTT‑TATTTTATAAGAGATATAAAAAACGGTGCGAACGCTGTTTTCt > 2:1948244/1‑100 (MQ=255) ttCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTa < 2:1267080/100‑1 (MQ=255) tCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTaa < 1:733529/100‑1 (MQ=255) cGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑TTTTTTTTT‑AATTTTATAATTTCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAg > 1:1269852/1‑100 (MQ=255) cGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTaa > 1:585250/1‑99 (MQ=255) gACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAGc > 1:17563/1‑100 (MQ=255) aCTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAGCa < 2:864786/100‑1 (MQ=255) cTGTCAAATCTTGCACTCTCTCCTGCCAGTTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAATAGCTATAAAAAACGGTTCGAACGCTGTTTTCTTAAGCAc < 2:1129945/100‑1 (MQ=255) cTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑TTTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAGc < 1:975913/99‑1 (MQ=255) cTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAGCAc < 2:602011/100‑1 (MQ=255) ggCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAGCACtt > 2:1175759/1‑100 (MQ=255) ggCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAGCACtt > 1:300825/1‑100 (MQ=255) ggCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAGCACtt > 2:2167781/1‑100 (MQ=255) cAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAGCACtttt > 1:1225762/1‑100 (MQ=255) aaaTCTGGAACTCTCTCAGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAGCACTTTTc < 2:1013544/100‑1 (MQ=255) tCTGGCTCTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAGCACTTTTCCGc < 1:1793471/100‑1 (MQ=255) tCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAGCACTTTTCCGc < 2:711410/100‑1 (MQ=255) tCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAGCACTTTTCCGc < 1:556794/100‑1 (MQ=255) ggCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAGCACTTTTCCGcaca > 2:1396088/1‑100 (MQ=255) gCACTCTCTCCGGCCAGGTGAACCAGTCG‑TTTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAGCACTTTTCCGcac < 1:226189/99‑1 (MQ=255) gCACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAGCACTTTTCAGCACaa > 1:79086/1‑100 (MQ=255) gCACTCTCTCCGGCCAAGTGAAACAATCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGGGAGAACGCATATTTCTTAAGCACTTTTCCACACaa > 2:980497/1‑100 (MQ=255) cACTCTCTTCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAGCACTTTTCCGCACAAc < 1:1219042/100‑1 (MQ=255) cACTCTCTCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAGCACTTTTCCGCACAAc > 1:915161/1‑100 (MQ=255) ctctctCCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAGCACTTTTCCGCACAACtt > 1:611392/1‑100 (MQ=255) tctctcCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAGCACTTTTCCGCACAACTTa < 2:1840547/100‑1 (MQ=255) ctctcCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAGCACTTTTCCGCACAACTTAt > 2:656369/1‑100 (MQ=255) ctctcCGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAGCACTTTTCCGCACAACTTAt > 1:236353/1‑100 (MQ=255) tcCGGCCAGGTGAACCAGTCG‑TTTTTTTTT‑TTTTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAGCACTTTTCCGCACAACTTATCtt > 2:151348/1‑100 (MQ=255) ccGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAGCACTTTTCCGCACAACTTATCTTc < 1:1436722/100‑1 (MQ=255) cGGCCAGGTGAACCAGTCG‑TTTTTTTTT‑AATTTTATAAGAGCTATAAAAAACGGTACTAACGCTGTTTTCTTAAGCAATTTTCCGCACAACTTATCTTc > 2:1578417/1‑99 (MQ=255) cGGCCAGGTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAGCACTTTTCCGCACAACTTATCTTCa < 1:626678/100‑1 (MQ=255) ggTGAACCAGTCG‑‑TTTTTTTTGTATTTTTTAAAAGCTATAAAAAACCGTGCGAACGATGTTTTATTAAGCACTTTTCAGCACAACTTCTATTCATTCGta > 2:1776230/1‑99 (MQ=255) ggTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAGCACTTTTCCGCACAACTTATCTTCATTCGTg > 1:2226247/1‑100 (MQ=255) ggTGAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAGCACTTTTCCGCACAACTTATCTTCATTCGTg < 2:1754721/100‑1 (MQ=255) gAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAGCACTTTTCCGCACAACTTATCTTCATTCGTGCtg < 1:301337/100‑1 (MQ=255) gAACCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAGCACTTTTCCGCACAACTTATCTTCATTCGTGCtg > 1:709911/1‑100 (MQ=255) gAACCAGTCG‑‑TTAGTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAGCACTTTTCCGCACAACTTATCTTCATTCGTGc < 1:1388426/98‑1 (MQ=255) aCCAGTCG‑TTTTTTTTT‑TTTTTTATAAAAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAGCACTTTTCCGCACAACTTATCTTCATTCGTGCtgt > 2:1203865/1‑99 (MQ=255) aCCAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAGCACTTTTCCGCACAACTTATCTTCATTCGTGCtgtg < 2:1345556/100‑1 (MQ=255) cAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAGCACTTTTCCGCACAACTTATCTTCATTCGTGCtgtg < 2:1957561/98‑1 (MQ=255) cAGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAGCACTTTTCCGCACAACTTATCTTCATTCGTGCTGTGGa < 2:1052776/100‑1 (MQ=255) aGTCG‑‑TTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAGCACTTTTCCGCACAACTTATCTTCATTCGTGCTGTGGAc < 1:1628013/100‑1 (MQ=255) | TCAAAGCGCCTTCAGCTGTACTGGCATAACGACATTTATACTGTCGTATAAAATTCGACTGGCAAATCTGGCACTCTCTCCGGCCAGGTGAACCAGTCG‑TTTTTTTTTGAATTTTATAAGAGCTATAAAAAACGGTGCGAACGCTGTTTTCTTAAGCACTTTTCCGCACAACTTATCTTCATTCGTGCTGTGGAC > NC_000913/107446‑107640 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |