| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,648,144 | (T)7→6 | 100% | intergenic (‑356/‑384) | dinQ ← / → arsR | UV‑inducible membrane toxin, DinQ‑AgrB type I toxin‑antitoxin system/arsenical resistance operon transcriptional repressor; autorepressor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,648,138 | 0 | T | . | 98.9% | 380.1 / ‑2.4 | 87 | intergenic (‑350/‑390) | dinQ/arsR | UV‑inducible membrane toxin, DinQ‑AgrB type I toxin‑antitoxin system/arsenical resistance operon transcriptional repressor; autorepressor |
| Reads supporting (aligned to +/- strand): ref base T (0/1); new base . (49/37); total (49/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.37e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.52e-01 | |||||||||||
GTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGCTCC > NC_000913/3648041‑3648229 | gTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGttt < 1:825092/100‑1 (MQ=255)gTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGttt > 1:1225481/1‑100 (MQ=255)gTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGttt < 1:1931207/100‑1 (MQ=255) tGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGtttttt < 1:748859/100‑1 (MQ=255) tGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGtttttt < 2:1225477/100‑1 (MQ=255) tGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGtttttt < 1:1572409/100‑1 (MQ=255) taatAGCATTGATGCGTTAGATGAGCGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAAACCGACTTTGCGTCGGttttttac < 2:33631/97‑3 (MQ=17) tATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACTTTGCGTCGGttttttact < 1:108998/100‑4 (MQ=21) tAGCATTGATGCGTTAGATGATGGCTAACTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCCAAGTCGG‑TTTTTTACATcc > 2:1901490/1‑100 (MQ=18) aGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCg < 1:941162/100‑1 (MQ=255) ncATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCgg > 1:1241696/2‑100 (MQ=255) gCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCg < 1:1936745/99‑1 (MQ=255) cATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACAGACGCACAGTCGG‑TTGTTTACATCCGGa > 1:396472/1‑100 (MQ=21) gATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCg > 1:1283538/1‑100 (MQ=255) aTGCGTTAGATGATGGCTATCTCACTCCATTCATAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCgg < 2:1850132/100‑1 (MQ=21) tGCGTTAGATTATGGCTATCTCACTCCAGTCAGAGCCACAAACTCAGTGCTGGAAAGT‑AAAAAACCGACGCATAGCTGG‑TTTTTTACATCCGGATTCg < 2:1299188/98‑1 (MQ=18) tGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGa < 2:636854/100‑1 (MQ=255) gTTATATCATGGCTATCTCACTCCAGTCAGACCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACaa < 2:445565/100‑1 (MQ=18) gTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACaa > 1:1502911/1‑100 (MQ=255) gTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACaa < 2:2008342/100‑1 (MQ=255) tAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCTGATTCGGACAAg > 1:1232118/1‑99 (MQ=255) tAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAgg > 1:1624561/1‑100 (MQ=255) tAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAgg > 1:1201735/1‑100 (MQ=255) tAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAgg < 2:1690420/100‑1 (MQ=255) tAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATACGGATTCGGACAAgg > 1:1000539/1‑100 (MQ=255) aGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAg > 1:1887575/1‑98 (MQ=255) aGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGc < 2:1858757/100‑1 (MQ=255) aGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGc < 1:1184479/100‑1 (MQ=255) aGATGATAGCTATCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGTTTTTTTACGTCCTGATTCAGAcctcc < 2:1232113/100‑5 (MQ=14) gatgatGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCt > 1:478997/1‑100 (MQ=255) tgGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAata > 2:548374/1‑100 (MQ=255) cTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGa > 1:620830/1‑100 (MQ=255) tATTTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGAc < 1:1750791/100‑1 (MQ=255) tATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGAc < 1:2019266/100‑1 (MQ=255) tctcACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACg > 2:701601/1‑99 (MQ=255) tcACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATg < 2:678451/100‑1 (MQ=255) cACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGa > 1:1633287/1‑100 (MQ=255) aCTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGAc > 2:279573/1‑100 (MQ=255) cTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGAcc > 2:1831336/1‑100 (MQ=255) cTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGAc < 2:1600934/99‑1 (MQ=255) ccAGTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGAccc > 1:518379/1‑99 (MQ=255) aGTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAg < 2:1245004/99‑1 (MQ=255) aGTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGt < 2:1326618/100‑1 (MQ=255) gTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTg > 1:909283/1‑100 (MQ=255) gagCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAACGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTGAATATGACGATGCCCCGTTGaaa > 2:669835/1‑99 (MQ=18) agCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATAACCCAGTGAAAGt > 1:360351/1‑100 (MQ=255) gCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGta < 2:1633276/100‑1 (MQ=255) gCCACCAACGCAGGGCTGGAAAGT‑AAAAATCCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGaaat < 2:1962587/98‑2 (MQ=25) ccaccaACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGtat > 1:2246376/1‑100 (MQ=255) ccaccaACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGtat > 2:1978780/1‑100 (MQ=255) caccaACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGtata < 2:2211153/100‑1 (MQ=255) caACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATaa > 2:303452/1‑100 (MQ=255) aCTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAAt < 1:2097957/100‑1 (MQ=255) cTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATaaa > 2:2040295/1‑98 (MQ=255) cTCAGAGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATaaa < 1:68668/98‑1 (MQ=255) tCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCg < 1:583403/100‑1 (MQ=255) cAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGt > 1:190069/1‑100 (MQ=255) aGGGCTGGAAAGT‑AAAAAACAGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGAAGATGACACAGTGAAAGTATATAAATTGt > 2:391605/1‑99 (MQ=25) gggCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGtga > 1:2036737/1‑98 (MQ=255) gCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACTATGACCCAGAAAAAGTATAAAAATCTTCAc > 2:1063509/1‑99 (MQ=25) gCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACt > 2:1820261/1‑100 (MQ=255) cTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTg > 1:1648125/1‑100 (MQ=255) tGGAAAGT‑AAAAAACCGACGCAAAGTCTG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCTTGTTAAAGTATATAAATCGTCACTga < 2:1139333/100‑2 (MQ=37) tGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGc < 1:532920/100‑1 (MQ=255) gAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGa > 2:805883/1‑100 (MQ=255) aaaGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGat < 2:1614059/100‑1 (MQ=255) aaaGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGat < 1:1414672/100‑1 (MQ=255) aaaGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGat < 1:697143/100‑1 (MQ=255) aaaGT‑AAAAAACCGACGAAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGat < 1:353815/100‑1 (MQ=255) aaGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGata < 1:805883/100‑1 (MQ=255) aaaaaaCCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGatatat > 1:2178558/1‑99 (MQ=255) aaaaaCCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATAc > 1:90288/1‑100 (MQ=255) aaaaCCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATAcc > 1:2246/1‑100 (MQ=255) aCCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGaa > 2:1680344/1‑100 (MQ=255) aCCGACGCAAAGTCGG‑ATTTTTAAATCCGGATTCGGACAAGGATTAATATGATGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGa > 2:315409/1‑99 (MQ=255) ccGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAg > 2:1692814/1‑100 (MQ=255) ccGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAg < 1:2098377/100‑1 (MQ=255) ccGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAg > 1:246603/1‑100 (MQ=255) cGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAg < 2:1749729/99‑1 (MQ=255) cGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGt < 2:2102869/100‑1 (MQ=255) cGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGt > 2:1559840/1‑100 (MQ=255) gACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGCGAAAGTATATAAATCGTCACTTCGATATATACCGaa > 1:995148/1‑97 (MQ=255) aCGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATACATACCGAAGTGc > 2:1848695/1‑100 (MQ=255) cGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGct > 2:2081726/1‑100 (MQ=255) cGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGct > 1:2187705/1‑100 (MQ=255) gCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGctc < 1:629714/100‑1 (MQ=255) gCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGctc < 2:48920/100‑1 (MQ=255) gCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGctc < 1:270185/100‑1 (MQ=255) cAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGctcc > 2:416633/1‑100 (MQ=255) cAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGctcc > 1:391378/1‑100 (MQ=255) cAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGctcc < 1:138023/100‑1 (MQ=255) cAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGctcc > 1:103396/1‑100 (MQ=255) cAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGct > 2:1585561/1‑98 (MQ=255) aaaaGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGctcc > 2:455339/2‑100 (MQ=255) aaGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGctc < 1:711770/97‑1 (MQ=255) | GTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGCTCC > NC_000913/3648041‑3648229 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |