| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,866,592:1 | +C | 100% | coding (960/993 nt) | rpoS ← | RNA polymerase, sigma S (sigma 38) factor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,866,588 | 1 | . | C | 97.7% | 307.8 / ‑0.0 | 88 | coding (964/993 nt) | rpoS | RNA polymerase, sigma S (sigma 38) factor |
| Reads supporting (aligned to +/- strand): ref base . (1/1); new base C (48/38); total (49/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.92e-01 | |||||||||||
CATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAG‑C‑CCC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCTACA > NC_000913/2866489‑2866682 | cATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAg < 2:948406/100‑1 (MQ=255) cTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAG‑c‑cccctgc < 1:1029408/100‑5 (MQ=255) ttttATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAG‑c‑cccctgcg > 1:216031/1‑95 (MQ=255) ttGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCC‑TGCGTTTGc > 1:1483666/1‑100 (MQ=255) tttgCACATAAAAGTCCAGCCTCGCTTGAGATTGGCCTTGCTGACAGATGCTTACTTACTCGCGGAACTGCGCTTCGATATTCAGCC‑CCC‑TGCGTTTGCa < 2:1900471/98‑1 (MQ=255) tgtgCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCC‑TGCGTTTGCa < 2:1094876/100‑1 (MQ=255) gtgCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCC‑TGCGTTTGCAg < 1:1116269/100‑1 (MQ=255) gtgCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCC‑TGCGTTTGCAg < 1:2190941/100‑1 (MQ=255) tgCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCC‑TGCGTTTGCAgg > 1:1735230/1‑100 (MQ=255) tgCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCC‑TGCGTTTGCAgg < 2:779759/100‑1 (MQ=255) gCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCC‑TGCGTTTGCAGGa > 2:722618/1‑100 (MQ=255) gCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCC‑TGCGTTTGCAGGa > 2:1289250/1‑100 (MQ=255) gCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGATTCGATATTCAGCC‑CCC‑TGCGTTTGCAgg > 2:652091/1‑99 (MQ=255) cacaGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCC‑TGCGTTTGCAGGAt < 1:2028204/100‑1 (MQ=255) caGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCC‑TGCGTTTGCAGGAttt > 1:749922/1‑100 (MQ=255) gAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCC‑TGCGTTTGCAGGATTTcg > 1:1125598/1‑100 (MQ=255) gAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCC‑TGCGTTTGCAGGATTTcg > 1:976322/1‑100 (MQ=255) gAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCC‑TGCGTTTGCAGGATTTcg > 2:1793748/1‑100 (MQ=255) gAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCC‑TGCGTTTGCAGGATTTcg > 1:1586872/1‑100 (MQ=255) aaaGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCC‑TGCGTTTGCAGGATTTcgcg < 2:1013835/100‑1 (MQ=255) aaaGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCC‑TGCGTTTGCAGGATTTcgcg < 1:2136218/100‑1 (MQ=255) aaaGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAG‑C‑CCCATGCGTTTGCAGGATTTcgcg < 2:259104/100‑1 (MQ=255) aaGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCC‑TGCGTTTGCAGGATTTCgcgc < 1:283884/100‑1 (MQ=255) aaGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCC‑TGCGTTTGCAGGATTTCgcgc < 1:1179904/100‑1 (MQ=255) aGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCC‑TGCGTTTGCAGGATTTCGCGCa < 1:668405/100‑1 (MQ=255) gCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCC‑TGCGTTTGCAGGATTTCGCGCaaa > 1:2223119/1‑100 (MQ=255) ccAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCC‑TGCGTTTGCAGGATTTCGCGCaa > 2:1449548/1‑98 (MQ=255) ccAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCC‑TGCGTTTGCAGGATTTCGCGCAAAc < 2:2174537/100‑1 (MQ=255) ccAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCC‑TGCGTTTGCAGGATTTCGCGCAAAc > 2:1267874/1‑100 (MQ=255) ccAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCC‑TGCGTTTGCAGGATTTCGCGCAAAc > 1:576920/1‑100 (MQ=255) aGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCC‑TGCGTTTGCATGATTTCGCGCAAACgg > 2:2081849/1‑100 (MQ=255) aGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCC‑TGCGTTTGCAGGATTTCGCGCAAACgg < 1:1457271/100‑1 (MQ=255) cTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCC‑TGCGTTTGCAGGATTTCGCGCAAACGgcgc < 1:1386252/100‑1 (MQ=255) gCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAgn < 1:1053382/100‑2 (MQ=255) gCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAgg < 1:1589405/100‑1 (MQ=255) gCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAgg < 1:926867/100‑1 (MQ=255) cTTGAGACTGGCTTTTCTGACAGATGCTTAATTACTCGCGGAACAGCGCTTCGATATTAAG‑CGCCC‑TGAGTTTGCAGAATTTCGCGAAAACGGCGCAg > 2:1515975/1‑98 (MQ=255) ttGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGcc < 1:483721/100‑1 (MQ=255) tGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATCTTCAGCC‑CCC‑TGCGTTTACAGGATTTCGCGCAAACGGCGCAGGCCt > 2:213572/1‑100 (MQ=255) tGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCt > 2:1209370/1‑100 (MQ=255) gagaCTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCtt < 2:1103313/100‑1 (MQ=255) agaCTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCtt < 2:1667733/99‑1 (MQ=255) gaCTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCa > 1:179591/1‑100 (MQ=255) tGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAAcc < 2:508600/100‑1 (MQ=255) tGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAAcc < 1:1010269/100‑1 (MQ=255) ggCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCt < 1:1247915/100‑1 (MQ=255) gCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTg > 1:339165/1‑100 (MQ=255) ccTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGa > 2:2226229/1‑100 (MQ=255) cTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGaa > 2:1420508/1‑100 (MQ=255) tttCTGATAGATGCTTACTGACTCGCGGAACACCGCTTCGATATTCAGCC‑CCC‑TGCTTTTGCAGGATTTGGCGCAAACGGCGCAGGCCTTCAACCTGaa < 1:1159331/99‑1 (MQ=255) ttCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATc > 1:1467490/1‑100 (MQ=255) gACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGc > 1:1944058/1‑100 (MQ=255) gACAGATGCTTACGTACTCGCGGAACAGCGCTTCGATAATCAGCC‑CCC‑TGCGTTCGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGc > 2:1380925/1‑100 (MQ=255) aCAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCC‑TGCGTTTGCATGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCg < 1:2081863/100‑1 (MQ=255) cAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGa > 2:1327235/1‑100 (MQ=255) gATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAac > 2:2119152/1‑100 (MQ=255) gATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAac < 2:1738284/100‑1 (MQ=255) gATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAac > 1:327855/1‑100 (MQ=255) cttacttaCTCGCGGAACAGCGCTTCGATATTCAGCC‑CCC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGt > 1:1798063/1‑100 (MQ=255) tacttactCGCGGAACAGCGCTTCGATATTCAGCC‑CCC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTc > 1:1439627/1‑100 (MQ=255) tacttactCGCGGAACAGCGCTTCGATATTCAGCC‑CCC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTc < 1:1833219/100‑1 (MQ=255) cttactCGCGGAACAGCGCTTCGATATTCAGCC‑CCC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCAc > 2:58871/1‑100 (MQ=255) ttactCGCGGAACAGCGCTTCGATATTCAGCC‑CCC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACg < 1:722618/100‑1 (MQ=255) ttactCGCGGAACAGCGCTTCGATATTCAGCC‑CCC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACg > 1:1233173/1‑100 (MQ=255) tactCGCGGAACAGCGCTTCGATATTCAGCC‑CCC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACgg < 2:1735219/100‑1 (MQ=255) actCGCGGAACAGCGCTTCGATATTCAGCC‑CCC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACggg < 1:2055179/100‑1 (MQ=255) actCGCGGAACAGCGCTTCGATATTCAGCC‑CCC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACggg < 2:666645/100‑1 (MQ=255) actCGCGGAACAGCGCTTCGATATTCAGCC‑CCC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACggg < 2:794632/100‑1 (MQ=255) ctCGCGGAACAGCGCTTCGATATTCAGCC‑CCC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGt > 1:1566856/1‑100 (MQ=255) tCGCGGAACAGCGCTTCGATATTCAGCC‑CCC‑TGAGTCTGCAGGATTTCGCGCAACCGGCGCAGGCCCTCCACCTAAATCTGGCGACCACGTCCACGGGt > 2:655129/1‑99 (MQ=255) cgcgGAACAGCGCTTCGATATTCAGCC‑CCC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGa > 1:1367347/1‑100 (MQ=255) cgcgGAACAGCGCTTCGATATTCAGCC‑CCC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGa > 1:1128680/1‑100 (MQ=255) cgcgGAACAGCGCTTCGATATTCAGCC‑CCC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGa > 1:2182215/1‑100 (MQ=255) cgcgGAACAGCGCTTCGATATTCAGCC‑CCC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGa > 2:1110759/1‑100 (MQ=255) cgGAACAGCGCTTCGATATTCAGCC‑CCC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAgg < 1:104351/100‑1 (MQ=255) ggAACAGCGCTTCGATATTCAGCC‑CCC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGc > 2:209040/1‑100 (MQ=255) gAACAGCGCTTCGATATTCAGCC‑CCC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGcc > 2:1737181/1‑100 (MQ=255) aGCGCTTCGATATTCAGCC‑CCC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAAtt > 1:2203024/1‑100 (MQ=255) aGCGCTTCGATATTCAGCC‑CCC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAAtt < 1:2226244/100‑1 (MQ=255) gcgcTTCGATATTCAGCC‑CCC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAAttt > 1:635662/1‑100 (MQ=255) cgcTTCGATATTCAGCC‑CCC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTc > 2:636066/1‑100 (MQ=255) gcTTCGATATTCAGCC‑CCC‑TGAGTTTGCAGGATTTCGCGCAAACGGCGCAGGCATTCAACCTGAATCTGGCGCACACGTTCACGGGTGAGGACact > 2:2023210/1‑94 (MQ=255) cTTCGATATTCAGCC‑CCC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCAc < 1:1663715/100‑1 (MQ=255) cTTCGATATTCAGCC‑CCC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCAc < 1:2023224/100‑1 (MQ=255) cTTCGATATTCAGCC‑CCC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCAc > 2:1012858/1‑100 (MQ=255) cTTCGATATTCAGCC‑CCC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGGTCACGGGTGAGGCCAATTTCAc < 2:1300520/100‑1 (MQ=255) cGATATTCAGCC‑CCC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGAc < 1:1938154/100‑1 (MQ=255) gATATTCAGCC‑CCC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGAcc > 2:1539937/1‑100 (MQ=255) gATATTCAGCC‑CCC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGACTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAAGTTCACGAcc > 2:1113222/1‑100 (MQ=255) atTCAGCC‑CCC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCTAc > 2:697150/1‑100 (MQ=255) ttCAGCC‑CCC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCTACa > 1:1089873/1‑100 (MQ=255) | CATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAG‑C‑CCC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCTACA > NC_000913/2866489‑2866682 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |