| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC | NC_000913 | 4,370,608 | Δ4 bp | 38.8% | intergenic (‑196/‑77) | yjeH ← / → groS | putative transporter/Cpn10 chaperonin GroES, small subunit of GroESL |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4370607 | 54 (0.660) | 34 (0.420) | 30/176 | NT | 38.8% | intergenic (‑195/‑81) | yjeH/groS | putative transporter/Cpn10 chaperonin GroES, small subunit of GroESL |
| ? | NC_000913 | 4370612 = | 54 (0.670) | intergenic (‑200/‑76) | yjeH/groS | putative transporter/Cpn10 chaperonin GroES, small subunit of GroESL | |||||
CGATGAAATGTGAGGTGAATCAGGGTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4370508‑4370607‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTCCATTGCATGA > NC_000913/4370612‑4370710 CGATGAAATGTGAGGTGAATCAGGGTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTT < 2:1587250/100‑1 AATGTGAGGTGAATCAGGGTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTGGTCAC < 2:821579/100‑1 ATGTGAGGTGAATCAGGGTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTGGTCACC < 2:878975/100‑1 GGTGAATCAGGGTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTGGTCACCAGCCGG > 2:1307543/1‑100 GGTGAATCAGGGTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTGGTCACCAGCCGG > 1:1549403/1‑100 TGAATCAGGGTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCGTGAAGGGGCGAAGCCTCATCCCCATTTGGTCACCAGCCGGG < 1:1768952/99‑1 ATCAGGGTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTGGTCACCAGCCGGGAAAC < 2:194226/100‑1 AGGGTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTGGTCACCAGCCGGGAAACCAC > 2:338802/1‑100 GTTTTCTCCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTGGTCACCAGCCGGGAAACCACGTA < 2:1218128/100‑1 GTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTGGTCACCAGCCGGGAAACCACGTA < 2:1684998/100‑1 ACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTGGTCACCAGCCGGGAAACCACGTAAGC > 1:2231396/1‑97 CCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTGGTCACCAGCCGGGAAACCACGTAAGCTCCG > 1:1415267/1‑100 CCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTGGTCACCAGCCGGGAAACCACGTAAGCTCCGG < 1:1605138/100‑1 CGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGC < 2:1689963/100‑1 GATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCG < 1:2072886/100‑1 TTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCAC > 2:1898305/1‑100 TGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCAC < 2:2224295/99‑1 CAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGA < 1:338801/100‑1 AGAAGTTTTTGTATTGTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATGTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAGCA < 1:486136/97‑1 ATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACG > 1:2189170/1‑100 TTCTTTTTCTCCCTTGAAGGGGCGAAGCCTCATCCCCATTTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTC < 1:103051/100‑1 TTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTC < 1:453028/100‑1 TTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTC > 1:211252/1‑100 TTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCA < 1:2027822/100‑1 TTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAG < 1:8911/100‑1 TCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGG > 2:1244835/1‑100 CCCCCTTGAAGGGGCGAAGCCTCCTCCCCATTTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGGCACCCATAACACATACGGACTTACTCAAAGGA < 2:2231078/100‑1 CCCTTGAAGGGGCGAAGCATCATCCCCATTTGGTCACCAGCCGGGAAACCACGTAAGCTCCGTCATAACCCATAACAGAAACGGACTTCGTCAAAGGAG > 2:447790/1‑99 GCGAAGCCTCATCCCCATTTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGA < 1:1653019/100‑1 CTCATCCCCATTTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCAATAACAGATACACACTTTCTCAAAGTAGAGTTATCAATAAATAT > 1:852079/1‑97 CATCCCCATTTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTC < 2:211252/100‑1 CATCCCCATTTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTC > 1:2128082/1‑100 CATCCCCATTTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTC < 1:1244840/100‑1 TCCCCATTTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTCCA < 2:1225759/100‑1 CCCATTTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTCCATT > 2:513776/1‑100 CATTTGGTCACCAGCCGGGAAACCACGTAAGCTCTGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTCCATTGC > 2:587330/1‑100 CATTTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTCCATTGC < 1:578260/100‑1 TGGTCGCCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAATAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTCCATTGCATG < 2:312909/99‑1 TGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTCCATTGCATGA > 1:41771/1‑100 CGATGAAATGTGAGGTGAATCAGGGTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4370508‑4370607‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTCCATTGCATGA > NC_000913/4370612‑4370710 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |