| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1624887 | 50 (0.610) | 11 (0.150) | 9/162 | NT | 18.3% | coding (115/519 nt) | ydeJ | inactive PncC family protein |
| ? | NC_000913 | = 1624897 | 53 (0.710) | coding (125/519 nt) | ydeJ | inactive PncC family protein | |||||
AATAGAGATAAAATTGTACAACTTGTAGATACCGATACTATTGAAAACCTGACATCCGCGTTGAGTCAAAGACTTATCGCGGATCAATTACGCTTAAC‑TACCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1624782‑1624887‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taccgccgGTGCATGATTCGGCGGTAGTTAAGCGTAATTGATCCGCGATAAGTCTTTGACTCAACGCGGATGTCAGGTTTTCAATAGTATCGGTATCTACAAGTTGT < NC_000913/1624897‑1624799 AATAGAGATAAAATTGTACAACTTGTAGATACCGATAATATTGAAAACCTGACATCCGCGTTGAGTCAAAGACTTATCGCGGATCAATTACGATTAAC‑TA > 2:1199000/1‑100 TAGAGATAAAATTGTACAACTTGTAGATACCGATACTATTGAAAACCTGACATCCGCGTTGAGTCAAAGACTTATCGCGGATCAATTACGCTTAAC‑TACC > 1:274058/1‑100 AGAGATACAATAGTACAACTTGTAGATACCGATACTATTGAAAACCTGACATCCGCGTTGAGTCAAAGACTTATCGCGGATCAATTACGCTTAAC‑TACCG > 2:1169853/1‑100 GATAAAATTGTACAACTTGTAGATACCGATACTATTGAAAACCTGACATCCGCGTTGAGTCAAAGACTTATCGCGGATCAATTACGCTTAAC‑TACCGCCG < 1:1158416/100‑1 TGTAGATACCGATACTATTGAAAACCTGACATCCGCGTTGAGTCAAAGACTTATCGCGGATCAATTACGCTTAAC‑TACCGCCGGTGCATGATTCGGCGGT < 1:797461/100‑1 TAGATACCGATACTATTGAAAACCTGACATCCGCGTTGAGTCAAAGACTTATCGCGGATCAATTACGCTTAAC‑TACCGCCGGTGCATGATTCGGCGGTAG < 2:2077194/100‑1 AGATACCGATACTATTGAAAACCTGACATCCGCGTTGAGTCAAAGACTTATCGCGGATCAATTACGCTTAAC‑TACCGCCGGTGCATGATTCGGCGGTAGT < 2:229236/100‑1 AGATACCGATACTATTGAAAACCTGACATCCGCGTTGAGTCAAAGACTTATCGCGGATCAATTACGCTTAAC‑TACCGCCGGTGCATGATTCGGCGGTAGT < 1:1950549/100‑1 GATACCGATACTATTGAAAACCTGACATCCGCGTTGAGTCAAAGACTTATCGCGGATCAATTACGCTTAAC‑TACCGCCGGTGCATGATTCGGCGGTAGTT < 1:1931495/100‑1 ACCGATACTATTGAAAACCTGACATCCGCGTTGAGTCAAAGACTTATCGCGGATCAATTACGCTTAAC‑TACCGCCGGTGCATGATTCGGCGGTAGTTAAG < 1:193190/100‑1 ACCGATACTATTGAAAACCTGACATCCGCGTTGAGTCAAAGACTTATCGCGGATCAATTACGCTTAAC‑TACCGCCGGTGCATGATTCGGCGGTAGTTAAG < 1:962469/100‑1 GATACTATTGAAAACCTGACATCCGCGTTGAGTCAAAGACTTATCGCGGATCAATTACGCTTAACTTACCGCCGGTGCATGATTCGGCGGTAGTTAAGCG < 1:1344677/100‑1 GATACTATTGAAAACCTGACATCCGCGTTGAGTCAAAGACTTATCGCGGATCAATTACGCTTAAC‑TACCGCCGGTGCATGATTCGGCGGTAGTTAAGCGT < 1:794778/100‑1 AAGACTTATCGCGGATCAATTACGCTTAACTTACCGCCGGTGCATGATTCGGCGGTAGTTAAGCGTAATTGATCCGCGATAAGTCTTTGACTCAACGCGG < 1:677441/100‑1 CTTAAC‑TACCGCCGAATCATGCACCGGCGGTAGTTAAGCGTAATTGATCCGCGATAAGTCTTTGACTCAACGCGGATGTCAGGTTTTCAATAGTATCGGT > 2:683431/1‑100 TAAC‑TACCGCCGAATCATGCACCGGCGGTAGTTAAGCGTAATTGATCCGCGATAAGTCTTTGACTCAACGCGGATGTCAGGTTTTCAATAGTATCGGTA > 1:1196951/1‑99 TACCGCCGGTGCATGATTCGGCGGTAGTTAAGCGTAATTGATCCGCGATAAGTCTTTGACTCAACGCGGATGTCAGGTTTTCAATAGTATCGGTATCTAC < 2:799540/100‑1 GCCGGTGCATGATTCGGCGGTAGTTAAGCGTAATTGATCCGCGATAAGTCTTTGACTCAACGCGGATGTCAGGTTTTCAATAGTATCGGTATCTACAAGc > 1:1613689/1‑99 GCCGGTGCATGATTCGGCGGTAGTTAAGCGTAATTGATCCGCGATAAGTCTTTGACTCAACGCGGATGTCAGGTTTTCAATAGTATCGGTATCTACAAGT > 2:1321611/1‑100 GCCGGTGCATGATTCGGCGGTAGTTAAGCGTAATTGATCCGCGATAAGTCTTTGACTCAACGCGGATGTCAGGTTTTCAATAGTATCGGTATCTACAAGT < 1:1904801/100‑1 CCGGTGCATGATTCGGCGGTAGTTAAGCGTAATTGATCCGCGATAAGTCTTTGACTCAACGCGGATGTCAGGTTTTCAATAGTATCGGTATCTACAAGTT > 2:723401/1‑100 CGGTGCATGATTCGGCGGTAGTTAAGCGTAATTGATCCGCGATAAGTCTTTGACTCAACGCGGATGTCAGGTTTTCAATAGTATCGGTATCTACAAGTTG < 1:449954/100‑1 CGGTGCATGATTCGGCGGTAGTTAAGCGTAATTGATCCGCGATAAGTCTTTGACTCAACGCGGATGTCAGGTTTTCAATAGTATCGGTATCTACAAGTTG < 2:1803744/100‑1 GGTGCATGATTCGGCGGTAGTTAAGCGTAATTGATCCGCGATAAGTCTTTGACTCAACGCGGATGTCAGGTTTTCAATAGTATCGGTATCTACAAGTTGT < 2:1724571/100‑1 GGTGCATGATTCGGCGGTAGTTAAGCGTAATTGATCCGCGATAAGTCTTTGACTCAACGCGGATGTCAGGTTTTCAATAGTATCGGTATCTACAAGTTGT < 1:1586438/100‑1 AATAGAGATAAAATTGTACAACTTGTAGATACCGATACTATTGAAAACCTGACATCCGCGTTGAGTCAAAGACTTATCGCGGATCAATTACGCTTAAC‑TACCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1624782‑1624887‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taccgccgGTGCATGATTCGGCGGTAGTTAAGCGTAATTGATCCGCGATAAGTCTTTGACTCAACGCGGATGTCAGGTTTTCAATAGTATCGGTATCTACAAGTTGT < NC_000913/1624897‑1624799 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |