New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3336878 =NA (NA)6 (0.080) 6/168 NT NA intergenic (‑75/+85) ibaG/mlaB acid stress protein; putative BolA family transcriptional regulator/ABC transporter maintaining OM lipid asymmetry, cytoplasmic STAS component
?NC_000913 3336905 = NA (NA)intergenic (‑102/+58) ibaG/mlaB acid stress protein; putative BolA family transcriptional regulator/ABC transporter maintaining OM lipid asymmetry, cytoplasmic STAS component

GCTCTGAATTTCATTATTTTCCATGGGATCTTCAATCATCAGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAG  >  NC_000913/3336780‑3336974
                                                                                                  |                                                                                                
gctctGAATTTCATTATTTTCCATGGGATCTTCAATCATCAGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAg                                                                                                 >  1:617505‑M2/6‑100 (MQ=255)
 ctctGAATTTCATTATTTTCCATGGGATCTTCAATCATCAGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGc                                                                                                >  2:1099932‑M2/5‑100 (MQ=255)
  tctGAATTTCATTATTTTCCATGGGATCTTCAATCATCAGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGcc                                                                                               >  2:205980‑M2/4‑100 (MQ=255)
    ttgtataatttgcctgctgatgttctgcctagttaaattttttcaggccggatatggcgttaaccgcctgtccggcaaacctgcctgcaagtcgAGcc                                                                                               >  1:1042708‑M1/95‑98 (MQ=255)
    ttaaTTTCATTATTTTCCATGGGATCTTCAATCATCAGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTc                                                                                             <  2:2186215/98‑1 (MQ=255)
      aaattaataattTTCCATGGGATCTTCAATCATCAGTTAATAAACCAGCGAAACATCTTAGAGCAAATTTGCGCTGGaaaaaaaaaaaaaaaa                                                                                                  <  2:2239511/84‑1 (MQ=255)
        tttCATTATTTTCCATGGGATCTTCAATCATCAGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCtn                                                                                         <  1:1264805/100‑2 (MQ=255)
          tCATTATTTTCCATGGGATCTTCAATCATCAGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGAt                                                                                       >  2:95844/1‑100 (MQ=255)
           cATTATTTTCCATGGGATCTTCAATCATCAGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATa                                                                                      >  1:2059101/1‑100 (MQ=255)
           cATTATTTTCCATGGGATCTTCAATCATCAGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATa                                                                                      <  2:433593/100‑1 (MQ=255)
             ttattTTCCATGGGATCTTCAATCATCAGTTAATAAACCAGCGAAACATCTTAGAGCCAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATaaa                                                                                    >  2:1902219/1‑100 (MQ=255)
             ttattTTCCATGGGATCTTCAATCATCAGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATaca                                                                                    <  1:1517781/100‑3 (MQ=255)
              tattTTCCATGGGATCTTCAATCATCAGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAAt                                                                                   >  2:942584/1‑100 (MQ=255)
               attTTCCATGGGATCTTCAATCATCAGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATc                                                                                  <  1:2063930/100‑1 (MQ=255)
               attTTCCATGGGATCTTCAATCATCAGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATc                                                                                  <  2:617505/100‑1 (MQ=255)
                  ttCCTTGGGATCTTAAATCATCAGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGa                                                                               <  1:249654/100‑1 (MQ=255)
                    ccATGGGATCTTCAATCATCAGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACa                                                                             >  2:2054090/1‑100 (MQ=255)
                      aTGGGATCTTCAATCATCAGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAg                                                                           <  1:89121/100‑1 (MQ=255)
                       tGGGATCTTCAATCATCAGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAgg                                                                          >  1:1086062/1‑100 (MQ=255)
                       atgttctgcctcgttaaattttttcaggccggatatggcgttaaccgccggtacggcaaacctgcctgcaagtcgAGCCTCGCTGATAAATCAGACAAgg                                                                          >  2:1792981‑M1/76‑100 (MQ=255)
                       atgttctacctcgttaaattttttcaggccggatatggcgttaaccgcctgtcctgcaaacctgcctgcaagtcgAGCCTCGCTGATAAATCAGACaa                                                                            >  2:883982‑M1/76‑98 (MQ=255)
                        tgttctgcctcgttaaattttttcaggccggatatggcgttaaccgcctgtccggcaaacctgcctgcaagtcgAGCCTCGCTGATAAATCAGACAAGGc                                                                         >  1:278186‑M1/75‑100 (MQ=255)
                        gggATCTTCAATCATCAGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGc                                                                         <  1:1421443/100‑1 (MQ=255)
                         gttctgcgtcgttaaattttttcaggccggatatggcgttaaccgcctgtccggcaaacctgcctgcaagtcgAGCCTCGCTGATAAATCAGACAAGGCt                                                                        >  1:1662129‑M1/74‑100 (MQ=255)
                         ggATCTTCAATCATCAGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCt                                                                        >  2:2030535/1‑100 (MQ=255)
                         ggATCTTCAATCATCAGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCt                                                                        >  2:1017295/1‑100 (MQ=255)
                         ggATCTTCAATCATCAGTTAATAAACCAGCAAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATTAGCAAATATCCTCGCTGATAAATCAGACAAGGc                                                                         <  2:1774641/99‑1 (MQ=255)
                          ttctgcttcgttaaattttttcaggccggatatggcgttaaccgcctgtccggcaaacctgcctgcaagtcgAGCCTCGCTGATAAATCAGACAAGGCTc                                                                       >  1:1336274‑M1/73‑100 (MQ=255)
                             tgcctcgttaaattttttcaggccggatatggcgttaaccgcctgtccggcaaacctgcctgcaagtcgAGCCTCGCTGATAAATCAGACAAGGCTCGAc                                                                    >  1:1564145‑M1/70‑100 (MQ=255)
                             cTTCAATCATCAGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATACATCAGACAAGGCTCGAc                                                                    <  2:860852/100‑1 (MQ=255)
                             cTTCAATCATCAGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGAc                                                                    >  1:635133/1‑100 (MQ=255)
                              ttCAATCATCAGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACt                                                                   >  1:1082555/1‑100 (MQ=255)
                               tCAATCATCAGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACtt                                                                  >  2:439630/1‑100 (MQ=255)
                                cAATCATCAGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACtt                                                                  >  1:88692/1‑99 (MQ=255)
                                  atcatcAGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTgca                                                               <  1:1496400/100‑1 (MQ=255)
                                    catcaGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTgcagg                                                             <  2:1697067/100‑1 (MQ=255)
                                    catcaGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTgcagg                                                             <  1:1099934/100‑1 (MQ=255)
                                     atcaGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTgcaggc                                                            <  1:1319859/100‑1 (MQ=255)
                                        aGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGcaggcagg                                                         <  2:2124501/100‑1 (MQ=255)
                                        aGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGcaggcagg                                                         <  2:1805173/100‑1 (MQ=255)
                                           taataaACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGttt                                                      >  2:1142378/1‑100 (MQ=255)
                                            aataaACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTg                                                     >  2:1949468/1‑100 (MQ=255)
                                             ataaACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGc                                                    <  1:2204492/100‑1 (MQ=255)
                                               aaaCCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCg                                                  <  2:276159/100‑1 (MQ=255)
                                                  ccAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCCACTTGCAGACACGTTTGCCGGAc                                               >  1:443544/1‑100 (MQ=255)
                                                   cAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACa                                              >  1:1299824/1‑100 (MQ=255)
                                                   cAGCGAAACATCTTAGAGCAAAGTTACGCTGGCATAAAAAATCAAAAAGCCCCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTTCGGGACa                                              <  2:769709/100‑1 (MQ=255)
                                                     gCGAAACATCTTAGAGCAAAGTTACGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAgg                                            >  1:856510/1‑100 (MQ=255)
                                                      cGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACGAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGc                                           <  2:1950898/100‑1 (MQ=255)
                                                       gAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCg                                          >  1:143618/1‑100 (MQ=255)
                                                        aaaCATCTTAGAGCAAAGTTGCGCTGGCATAACTAAGCAAAAAGCCTCGCTGATAAATCAGACGAGGCTCTACTTGCAGGCAAGTTTGCCGGACAGGc                                           <  2:1950893/98‑1 (MQ=255)
                                                        aaaCATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCgg                                         <  1:1142382/100‑1 (MQ=255)
                                                        aaaCATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCgg                                         <  2:2018576/100‑1 (MQ=255)
                                                        aaaCATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCgg                                         >  2:1262436/1‑100 (MQ=255)
                                                         aaCATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGt                                        <  1:1375772/100‑1 (MQ=255)
                                                          aCATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGtt                                       >  1:155315/1‑100 (MQ=255)
                                                           cATCTTAGAGTAAAGTTTCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGTCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGt                                        <  2:1740467/98‑1 (MQ=255)
                                                           cATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTa                                      <  1:309287/100‑1 (MQ=255)
                                                           cATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTa                                      >  1:1582077/1‑100 (MQ=255)
                                                               ttAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGc                                  <  1:478305/100‑1 (MQ=255)
                                                                tAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGcc                                 >  2:1276467/1‑100 (MQ=255)
                                                                 agagCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCa                                >  2:484123/1‑100 (MQ=255)
                                                                  gagCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCat                               >  1:193561/1‑100 (MQ=255)
                                                                  gagCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCat                               >  1:1568097/1‑100 (MQ=255)
                                                                    gCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCatat                             >  2:789299/1‑100 (MQ=255)
                                                                    gCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCatat                             >  2:783333/1‑100 (MQ=255)
                                                                     cAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATc                            >  2:1073124/1‑100 (MQ=255)
                                                                        aGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCg                          >  1:446130/1‑99 (MQ=255)
                                                                         gTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGc                        <  2:1925922/100‑1 (MQ=255)
                                                                                 ggCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGaaaaa                <  1:1746148/100‑1 (MQ=255)
                                                                                 ggCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGaaaaa                >  2:587927/1‑100 (MQ=255)
                                                                                 ggCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGaaaaa                >  2:330557/1‑100 (MQ=255)
                                                                                  gaataaaaaaAAAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGAAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGcc                       <  2:1350952/90‑1 (MQ=255)
                                                                                  gCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGaa                   >  1:1262619/1‑96 (MQ=255)
                                                                                   cATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAAt              >  2:197841/1‑100 (MQ=255)
                                                                                    ataaataaGCAAAAAGCCTCGCTGATAAATCAGACAGGGCTTGACTTGCAGGCAAGTTTGCCGTACAGGCGGTTAACTTCATATACGGCCTGAAAAAAtt             <  2:1076674/100‑1 (MQ=255)
                                                                                    ataaataaGCAAAAAGCCTCGCTGATAAACCAGACAAGGCTCGACTTACAGGCAGGTATGCCGGACACGCGGTTATCGCCATATCCGGCCTGAAAACAtt             <  2:1529829/100‑1 (MQ=255)
                                                                                     taaataaGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAAttt            >  1:2232065/1‑100 (MQ=255)
                                                                                     taaataaGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAAttt            <  1:376334/100‑1 (MQ=255)
                                                                                      aaataaGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTa           >  2:400263/1‑100 (MQ=255)
                                                                                        ataaGCAAAAAGCCTCGCTGTTAAATCAGACAAGGCTCGACTTGCAGGAAGGTTTGGCGGACAGGCGGTTAACGCAATATCCGGCCTGAAAAAATTTAAc         <  2:955576/100‑1 (MQ=255)
                                                                                           aGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAg      >  1:354863/1‑100 (MQ=255)
                                                                                            gCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGa       >  2:528824/1‑98 (MQ=255)
                                                                                            gCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAgg     >  2:553681/1‑100 (MQ=255)
                                                                                            gCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAgg     <  2:1081853/100‑1 (MQ=255)
                                                                                             cAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGc    <  2:670769/100‑1 (MQ=255)
                                                                                             cAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGc    <  1:1440489/100‑1 (MQ=255)
                                                                                              aaaaaGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCa   <  1:439629/100‑1 (MQ=255)
                                                                                              aaaaaGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCa   <  1:772861/100‑1 (MQ=255)
                                                                                              aaaaaGCCTCGATGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCa   <  1:1461729/100‑1 (MQ=255)
                                                                                                acaGCCTCGGTGATAATTCAGACAGGGCTCGACTTTCAGGTATGTTTGACGGACAGGCGGTGATCGGTATATCAGATGTGAAAAAATTTAACGAGGCAg  <  2:436925/97‑1 (MQ=255)
                                                                                                  |                                                                                                
GCTCTGAATTTCATTATTTTCCATGGGATCTTCAATCATCAGTTAATAAACCAGCGAAACATCTTAGAGCAAAGTTGCGCTGGCATAAATAAGCAAAAAGCCTCGCTGATAAATCAGACAAGGCTCGACTTGCAGGCAGGTTTGCCGGACAGGCGGTTAACGCCATATCCGGCCTGAAAAAATTTAACGAGGCAG  >  NC_000913/3336780‑3336974

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.