BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4415961	NA (NA)	3 (0.040)	3/166	NT	NA	noncoding (4/34 nt)	REP332 (repetitive extragenic palindromic) element; contains 1 REP sequences	REP332 (repetitive extragenic palindromic) element; contains 1 REP sequences
*	?	NC_000913	= 4415991	NA (NA)	3 (0.040)	3/166	NT	NA	noncoding (34/34 nt)	REP332 (repetitive extragenic palindromic) element; contains 1 REP sequences	REP332 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 116 total aligned reads displayed.

GATTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCT  >  NC_000913/4415862‑4416060

 aTTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGg                                                                                                    >  1:297076‑M1/1‑99 (MQ=255)

  tttATTGCTTCGGGCGACGGTGGGAGTGGGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGg                                                                                                    <  2:1556662‑M1/99‑2 (MQ=255)

  tttATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGgc                                                                                                   >  1:1778220‑M1/1‑98 (MQ=255)

    tATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGgccg                                                                                                 >  2:1853459‑M1/1‑96 (MQ=255)

        gctgcGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACa                                                                                             >  1:153522/1‑100 (MQ=255)

         ctgcGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACaa                                                                                            >  2:946924/1‑100 (MQ=255)

         ctgcGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACaa                                                                                            >  1:959317/1‑100 (MQ=255)

           gcGGGCTACGGGGGGAGTGTGTGTGTAAGCGTATACGAATGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAgg                                                                                          <  2:1775984/100‑1 (MQ=255)

           gcGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAgg                                                                                          <  1:1939519/100‑1 (MQ=255)

            cGGGCGACGGGGTGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGgc                                                                                         <  1:1063192/100‑1 (MQ=255)

            cGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGgc                                                                                         >  2:1737396/1‑100 (MQ=255)

             gggCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGgcg                                                                                        <  2:348412/100‑1 (MQ=255)

                cGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTc                                                                                     >  1:562869/1‑100 (MQ=255)

                 gACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTcg                                                                                    >  2:2211806/1‑100 (MQ=255)

                  aCGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTcgc                                                                                   <  1:2152679/100‑1 (MQ=255)

                    ggggggAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCgcgc                                                                                 <  1:1548781/100‑1 (MQ=255)

                    ggggggAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCgcgc                                                                                 >  2:1981945/1‑100 (MQ=255)

                     gggggAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGcgcc                                                                                <  1:1616062/100‑1 (MQ=255)

                     gggggAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGcgcc                                                                                >  1:1202149/1‑100 (MQ=255)

                      ggggAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGcgccg                                                                               >  2:1975243/1‑100 (MQ=255)

                       gggAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGcgccg                                                                               <  1:410063/99‑1 (MQ=255)

                       gggAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGcgccg                                                                               <  2:69321/99‑1 (MQ=255)

                        ggAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCa                                                                             <  1:1570664/100‑1 (MQ=255)

                            tgtgtgtgtAAGCGTATACGACTGATGCGACGCTGGTTTCGTTTATCTAAATGAAATATTTGAAAATTGTAGGCCGTACAAGGCTCTCGCGCCGCATn                                                                           >  2:231479‑M2/1‑97 (MQ=255)

                             gtgtgtgtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGG                                                                        >  2:792098‑M2/1‑100 (MQ=255)

                              tgtgtgtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGgccggatgcggcgcgagcgccttgtccggc                                                                       <  1:1306888‑M1/100‑31 (MQ=255)

                              tgtgtgtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGC                                                                       >  2:385525‑M2/1‑100 (MQ=255)

                                  tgtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACGAAATGAAATATGTGAAAATGGTAGgccggatgcggcgcgagcgccttgtccggcctac                                                                   <  1:549467‑M1/100‑35 (MQ=255)

                                    tAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGtt                                                                 >  1:1006494/1‑100 (MQ=255)

                                    tAAGAGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGgccggatgcggcgcgagcgccttgtccggcctaca                                                                  <  1:930072‑M1/99‑36 (MQ=255)

                                      aGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCa                                                               >  2:626926/1‑100 (MQ=255)

                                       gCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCAt                                                              <  2:2020453/100‑1 (MQ=255)

                                        cGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCa                                                               >  1:836422/1‑98 (MQ=255)

                                         gTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCAttt                                                            <  2:1009419/100‑1 (MQ=255)

                                         gTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCAttt                                                            <  2:648659/100‑1 (MQ=255)

                                         gTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCAttt                                                            <  2:2178867/100‑1 (MQ=255)

                                          tataCGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTg                                                           <  2:638207/100‑1 (MQ=255)

                                           ataCGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGc                                                          <  1:326938/100‑1 (MQ=255)

                                           ataCGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGc                                                          >  2:1442632/1‑100 (MQ=255)

                                            taCGACTTATTCGATTCTGTTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCt                                                         <  1:626124/100‑1 (MQ=38)

                                            taCGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCt                                                         <  1:766937/100‑1 (MQ=255)

                                            taCGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCt                                                         >  2:239528/1‑100 (MQ=255)

                                            taCGACTGATGCGACGCTGGTTTAGATTAACTAAATGAAATATATGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCt                                                         >  2:470220/1‑100 (MQ=255)

                                             aCGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTg                                                        <  2:22327/100‑1 (MQ=255)

                                             aCGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTg                                                        <  1:1983335/100‑1 (MQ=255)

                                             aCGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTg                                                        <  2:1926978/100‑1 (MQ=255)

                                              cGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGt                                                       >  2:964714/1‑100 (MQ=255)

                                              cGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGt                                                       >  1:1674421/1‑100 (MQ=255)

                                               gACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTa                                                      <  1:1051432/100‑1 (MQ=255)

                                                aCTGATGCGACGCTGCTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAg                                                     <  1:2211821/100‑1 (MQ=255)

                                                 cTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCTCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGa                                                    >  2:1337227/1‑100 (MQ=255)

                                                  tGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGAt                                                   <  1:1842959/100‑1 (MQ=255)

                                                    aTGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTTATTTGCTGTAGATGa                                                 >  1:454399/1‑100 (MQ=255)

                                                     tGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGac                                                >  1:910697/1‑100 (MQ=255)

                                                     tGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATGGTTCATTTCCTGTAGATGac                                                >  2:674422/1‑100 (MQ=255)

                                                     tGCGACGCTGGTTTCGATTAACTAAATGAAATATGTAAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGa                                                 >  2:663836/1‑99 (MQ=255)

                                                       cGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGTCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTATATGacac                                              <  2:1170948/100‑1 (MQ=255)

                                                       cGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGacac                                              <  2:337571/100‑1 (MQ=255)

                                                       cGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGacac                                              <  1:290628/100‑1 (MQ=255)

                                                       cGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGacac                                              <  1:382700/100‑1 (MQ=255)

                                                       cGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGCTCAGTTGCTGTAGATAacac                                              >  1:100740/1‑100 (MQ=255)

                                                        gACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACt                                             >  2:19279/1‑100 (MQ=255)

                                                           gCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCAt                                          <  2:297077/100‑1 (MQ=255)

                                                            cTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATg                                         <  1:1137107/100‑1 (MQ=255)

                                                               gTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCAt                                      <  1:1853471/100‑1 (MQ=255)

                                                                tttCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATa                                     >  2:793841/1‑100 (MQ=255)

                                                                 ttCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATAc                                    <  2:1006492/100‑1 (MQ=255)

                                                                 ttCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATAc                                    <  1:1981959/100‑1 (MQ=255)

                                                                 ttCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATAc                                    <  2:244714/100‑1 (MQ=255)

                                                                 ttCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATAc                                    >  1:395668/1‑100 (MQ=255)

                                                                   cGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAg                                  <  1:1254759/100‑1 (MQ=255)

                                                                   cGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAg                                  >  2:2007505/1‑100 (MQ=255)

                                                                    gATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGt                                 >  1:1889248/1‑100 (MQ=255)

                                                                         aCTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGc                            >  1:582818/1‑100 (MQ=255)

                                                                          cTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTAt                               >  1:787586/1‑96 (MQ=255)

                                                                          cTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGcc                           >  1:1149850/1‑100 (MQ=255)

                                                                           tAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTATATGACACTCATGCATACAGTATCGcc                           <  2:977673/99‑1 (MQ=255)

                                                                           tAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCt                          <  1:853887/100‑1 (MQ=255)

                                                                            aaaTGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTg                         >  1:2216303/1‑100 (MQ=255)

                                                                             aaTGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGt                        <  2:1778208/100‑1 (MQ=255)

                                                                              aTGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTa                       >  2:1328487/1‑100 (MQ=255)

                                                                              aTGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTa                       <  2:211669/100‑1 (MQ=255)

                                                                              aTGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTa                       <  1:1309468/100‑1 (MQ=255)

                                                                                gAAATATGTGAAAATTGTAGGCCGGACAAGTCTCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTa                       <  2:424464/98‑1 (MQ=255)

                                                                                gAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTAcg                     >  2:217679/1‑100 (MQ=255)

                                                                                  aaTATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTAcgcg                   <  1:940708/100‑1 (MQ=255)

                                                                                     atGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCa                >  1:1599855/1‑100 (MQ=255)

                                                                                      tgtgAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAg               <  2:1829736/100‑1 (MQ=255)

                                                                                        tgAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGtt             >  1:1404187/1‑100 (MQ=255)

                                                                                        tgAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGtt             >  1:860657/1‑100 (MQ=255)

                                                                                         gAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACTCGCCAGTTa            >  1:599660/1‑100 (MQ=255)

                                                                                          aaaaTTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTAt           <  2:1202145/100‑1 (MQ=255)

                                                                                             aTTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAg        <  1:1287202/100‑1 (MQ=255)

                                                                                               tGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCctacaattttcacatatttcatttagttaatcgaaaccagcgtcgcatcagtcgtatactctta       <  1:930072‑M2/99‑65 (MQ=255)

                                                                                                gTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCctaccattttcacatatttcatttcgttaatcgaaaccagcgtcgcatcagtcgtatacgcttaca     <  1:549467‑M2/100‑67 (MQ=255)

                                                                                                gTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGgct     >  1:105425/1‑100 (MQ=255)

                                                                                                   ggCCGGACCAGGCGCTCGCGCCGCATCCGGCATTGTTCGTTTGCTGTAGATGACACTCATGCATACAGTATCGTCTTCACGCGCCAGTTATCAGgctgct  <  2:1302777/100‑1 (MQ=38)

                                                                                                   ggCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGgctgct  >  1:1873507/1‑100 (MQ=255)

                                                                                                   ggCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGgctgct  >  1:86444/1‑100 (MQ=255)

                                                                                                   ggCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGgctgct  >  1:1551755/1‑100 (MQ=255)

GATTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCT  >  NC_000913/4415862‑4416060

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.