New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	4635837 =	67 (0.820)	4 (0.050)	3/170	NT	5.3%	coding (317/474 nt)	creA	putative periplasmic protein
	?	NC_000913	4635885 =	80 (1.030)					coding (365/474 nt)	creA	putative periplasmic protein
Rejected: Frequency below cutoff threshold.

AAGATACCTCCGATGCGGCCATTTCTTGTCAGCAAGTCGGGCCGATTGAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCGACAAAGTTGT  >  NC_000913/4635738‑4635936                                                                                                    |                                                                                                    acggcatgacaggaaccgcgctaatcgcgtttttcggcgaaccttctacaactttgtcggagtaagccagataagcgagcgcgttgcgtttggcatcata                                                                                                     >  1:1286117‑M1/100‑100 (MQ=255)     tACCTCCGATGCGGCCATTTCTTGTCAGCAAGTCGGGCCGATTGAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCaaaaaa                                                                                                 >  2:361738/1‑100 (MQ=255)     tACCTCCGATGCGGCCATTTCTTGTCAGCAAGTCGGGCCGATTGAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCaaaaaa                                                                                                 >  2:1377208/1‑100 (MQ=255)      aCCTCCGATGCGGCCATTTCTTGTCAGCAAGTCGGGCCGATTGAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAAc                                                                                                >  1:2224149/1‑100 (MQ=255)      aCCTCCGAGGCGGCCATTTCTTGTCAGCAAGTCGGGCCGAGTGAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAAc                                                                                                <  2:2134979/100‑1 (MQ=255)        cTCCGATGCGGCCATTTCTTGTCAGCAAGTCGGGCCGATTGAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGc                                                                                              >  2:256159/1‑100 (MQ=255)         tCCGATGCGGCCATTTCTTGTCAGCAAGTCGGGCCGATTGAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGc                                                                                              <  2:1694306/99‑1 (MQ=255)         acaggaaccgcgctaatcgcgtttttcggcgaaccttctacaactttgtcggagtaagccagataagcgagcgcgttgcgtttggcatcatAAAAACGCa                                                                                             <  2:1507677‑M1/9‑1 (MQ=255)          ccGATGCGGCCATTTCTTGTCAGCAAGTCGGGCCGATTGAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCAc                                                                                            >  1:2044333/1‑100 (MQ=255)          ccGATGCGGCCATTTCTTGTCAGCAAGTCGGGCCGATTGAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCAc                                                                                            >  2:376566/1‑100 (MQ=255)            gATGCGGCCATTTCTTGTCAGCAAGTCGGGCCGATTGAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGt                                                                                          >  1:917903/1‑100 (MQ=255)               gCGGCCATTTCTTGTCAGCAAGTCGGGCCGATTGAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTccc                                                                                       <  2:30432/100‑1 (MQ=255)                cGGCCATTTCTTGTCAGCAAGTCGGGCCGATTGAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCt                                                                                      >  1:1744525/1‑100 (MQ=255)                 ggCCATTTCTTGTCAGCAAGTCGGGCCGATTGAACTGTCGGATCTTATTAAAAACGGCCAAGCTCAGGGCGCGGTAGTATTCAAAAAACGCACGTCCCTg                                                                                     >  2:391161/1‑100 (MQ=255)                  gCCATTTCTTGTCAGCAAGTCGGGCCGATTGAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTgg                                                                                    >  2:1523650/1‑100 (MQ=255)                    cATTTCTTGTCAGCAAGTCGGGCCGATTGAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTc                                                                                  <  2:1631058/100‑1 (MQ=255)                    cATTTCTTGTCAGCAAGTCGGGCCGATTGAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTc                                                                                  >  2:2197464/1‑100 (MQ=255)                    cATTTCTTGTCAGCAAGTCGGGCCGATTGAACTGTCGGATCGTATTAAAAAAGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTcc                                                                                        >  2:751520/1‑94 (MQ=255)                       ttCTTGTCAGCAAGTCGGGCCGATTGAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCttt                                                                               >  2:1110217/1‑100 (MQ=255)                        tCTTGTCAGCAAGTCGGGCCGATTGAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTa                                                                              <  1:455181/100‑1 (MQ=255)                          ttGTCAGCAAGTCGGGCCGATTGAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAg                                                                            <  1:842285/100‑1 (MQ=255)                          ttGTCAGCAAGTCGGGCCGATTGAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGATCTTTAAg                                                                            >  1:1257434/1‑100 (MQ=255)                           tGTCAGCAAGTCGGGCCGATTGAACTGTCGGATGGGATTAAAAACGGCAAAGCACAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAg                                                                            <  1:1926419/99‑1 (MQ=255)                           tGTCAGCAAGTCGGGCCGATTGAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGt                                                                           <  2:269547/100‑1 (MQ=255)                            gTCAGCAAGTCGGGCCGATTGAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTc                                                                          >  1:1666557/1‑100 (MQ=255)                             tcattaaGTCGGGCCGATTGAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCg                                                                         <  1:587901/95‑1 (MQ=255)                                  aaGTCGGGCCGATTGAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACa                                                                    >  1:1555304/1‑100 (MQ=255)                                   aGTCGGGCCGATTGAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAg                                                                   >  1:362570/1‑100 (MQ=255)                                        ggCCGATTGAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGt                                                              >  1:1988073/1‑100 (MQ=255)                                        ggCCGATTGAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGt                                                              <  2:1119765/100‑1 (MQ=255)                                            gATTGAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTgcgc                                                          <  2:1152787/100‑1 (MQ=255)                                                gAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCtttt                                                      >  1:1337298/1‑100 (MQ=255)                                                gAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCtttt                                                      >  2:373466/1‑100 (MQ=255)                                                 caactttgtcggagtaagccagataagcgagcgcgttgcgtttggcatcatAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTa                                                     >  1:1507687‑M1/52‑100 (MQ=255)                                                 aaCTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTa                                                     <  1:2116816/100‑1 (MQ=255)                                                 aaCTGTCGGAGCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAGCGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTa                                                     <  1:1381740/100‑1 (MQ=255)                                                  aCTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTat                                                    <  1:1827967/100‑1 (MQ=255)                                                   actttgtcggagtaagccagataagcgagcgcgttgcgtttggcatcatAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTatg                                                   >  2:247708‑M1/50‑100 (MQ=255)                                                   actttgtcggagtaagccagataagcgagcgcgttgcgtttggcatcatAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTatg                                                   >  1:2097677‑M1/50‑100 (MQ=255)                                                       cGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTatgatg                                                >  1:199663/1‑99 (MQ=255)                                                       cGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGc                                               <  2:1553361/100‑1 (MQ=255)                                                        gtcggagtaagccagataagcgagcgcgttgcgtttggcatcatAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGcc                                              >  1:979030‑M1/45‑100 (MQ=255)                                                        ggATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATTcc                                              >  2:191516/1‑100 (MQ=255)                                                         gATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCa                                             >  1:365895/1‑100 (MQ=255)                                                          aTCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCaa                                            >  1:2037647/1‑100 (MQ=255)                                                            cGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAaac                                          >  2:248461/1‑100 (MQ=255)                                                            cGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAaac                                          >  1:1415630/1‑100 (MQ=255)                                                            cGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAaac                                          >  2:1906447/1‑100 (MQ=255)                                                             gTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAaacg                                         >  1:1823348/1‑100 (MQ=255)                                                               aTTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAaacgca                                       >  2:643470/1‑100 (MQ=255)                                                               aTTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAaacgca                                       <  1:1894914/100‑1 (MQ=255)                                                                ttAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAaacgcaa                                      >  1:1599775/1‑100 (MQ=255)                                                                ttAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAaacgcaa                                      >  2:786242/1‑100 (MQ=255)                                                                 tAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCACTTTTATGATGCAAaacgcaa                                      <  2:141759/99‑1 (MQ=255)                                                                  aaaaaCGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAaacgcaacg                                    >  2:1507771/1‑100 (MQ=255)                                                                  aaaaaCGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAaacgcaacg                                    <  2:992209/100‑1 (MQ=255)                                                                  aaaaaCGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAaacgcaacg                                    >  2:1978797/1‑100 (MQ=255)                                                                  aaaaaCGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAaacgcaacg                                    <  1:1587633/100‑1 (MQ=255)                                                                   aaaaCGTCAAAGCTTAGGGCAAGGTAGTATTCAAAAAACGCACGTCATTGGTCTTTAATTCGTTACAATTCTTCGGATTTTATGATGCCAaactcaactc                                   >  2:1113518/1‑98 (MQ=255)                                                                   aaaaCGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAaacgcaacgc                                   >  1:1823473/1‑100 (MQ=255)                                                                       cGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGcgctc                               <  2:1498913/100‑1 (MQ=255)                                                                          cAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGcgctcgct                            <  2:2224134/100‑1 (MQ=255)                                                                          cAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGcgctcgct                            >  1:1087387/1‑100 (MQ=255)                                                                          cAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGcgctcgct                            >  1:413811/1‑100 (MQ=255)                                                                              gCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTAt                         >  1:1765088/1‑99 (MQ=255)                                                                              gCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATc                        >  1:472085/1‑100 (MQ=255)                                                                                   gggCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCt                   <  1:1286903/100‑1 (MQ=255)                                                                                   gggCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCt                   >  1:1965971/1‑100 (MQ=255)                                                                                   gggCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCt                   <  1:1287026/100‑1 (MQ=255)                                                                                   gggCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCt                   >  1:2242394/1‑100 (MQ=255)                                                                                     gCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTa                 >  1:2114321/1‑100 (MQ=255)                                                                                           tagtaTTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCg            >  2:2162526/1‑99 (MQ=255)                                                                                            agtaTTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCGAc          >  1:1821504/1‑100 (MQ=255)                                                                                             gtaTTCAAAAAACGCACGTCCCTGGTCTTTAAGTAGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCGACa         <  1:999763/100‑1 (MQ=255)                                                                                              tcttCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCGACaa        <  1:1153269/98‑1 (MQ=255)                                                                                              taTTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCGACaa        <  1:1646523/100‑1 (MQ=255)                                                                                               aTTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCGACaaa       >  2:585568/1‑100 (MQ=255)                                                                                               aTTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCGACaaa       >  1:1109452/1‑100 (MQ=255)                                                                                                ttCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTGCAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCGACAAAg      >  2:585814/1‑100 (MQ=255)                                                                                                ttCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCGACAAAg      >  2:1719896/1‑100 (MQ=255)                                                                                                ttCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCGACAAAg      >  2:750512/1‑100 (MQ=255)                                                                                                ttCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCGACAAAg      <  1:613889/100‑1 (MQ=255)                                                                                                 tCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCGACAAAGt     >  2:2200015/1‑100 (MQ=255)                                                                                                 tCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCGACAAAGt     >  2:1950865/1‑100 (MQ=255)                                                                                                 tCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCGACAAAGt     <  1:1039249/100‑1 (MQ=255)                                                                                                  cAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCGACAAAGtt    >  1:854959/1‑100 (MQ=255)                                                                                                  cAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCGACAAAGtt    >  2:778948/1‑100 (MQ=255)                                                                                                  cAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCGACAAAGtt    >  2:154922/1‑100 (MQ=255)                                                                                                   aaaaaaCGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCGACAAAGTTg   <  1:2249063/100‑1 (MQ=255)                                                                                                   aaaaaaCGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCGACAAAGTTg   >  1:973258/1‑100 (MQ=255)                                                                                                    AAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCGACAAAGTTGt  <  1:379828‑M1/100‑1 (MQ=255)                                                                                                    |                                                                                                    AAGATACCTCCGATGCGGCCATTTCTTGTCAGCAAGTCGGGCCGATTGAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCGACAAAGTTGT  >  NC_000913/4635738‑4635936

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.