New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 463836786 (1.050)3 (0.040) 3/166 NT 3.5% coding (190/1353 nt) creD inner membrane protein
?NC_000913 = 4638387 85 (1.120)coding (210/1353 nt) creD inner membrane protein
Rejected: Frequency below cutoff threshold.

Only 100 of 116 total aligned reads displayed.

TTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGTTACCTGAGTCATTGATGGTTGATGGCA  >  NC_000913/4638269‑4638466
                                                                                                  |                                                                                                   
  gTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGa                                                                                                  >  1:1658252/1‑100 (MQ=255)
  gTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGa                                                                                                  >  1:1394186/1‑100 (MQ=255)
   tCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGa                                                                                                  <  1:14834/99‑1 (MQ=255)
    cGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGAcc                                                                                                <  1:691427/100‑1 (MQ=255)
    cGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCATTGGGCCGCTCATCGCTATTCCtgtg                                                                                                   >  2:926001/1‑97 (MQ=255)
      aaCGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGa                                                                                              <  2:1982340/100‑1 (MQ=255)
            cTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTta                                                                                        <  1:205022/100‑1 (MQ=255)
            cTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTta                                                                                        >  1:1474558/1‑100 (MQ=255)
             tGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGGTATTCCTGTGACCGAGCTTtat                                                                                       <  2:1300738/100‑1 (MQ=255)
             tGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTtat                                                                                       >  2:2074795/1‑100 (MQ=255)
              gATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTtata                                                                                      <  1:897979/100‑1 (MQ=255)
              gATTACCGTAGCGATGTGGAAAATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTtata                                                                                      >  2:720994/1‑100 (MQ=255)
                 tACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACgg                                                                                   <  1:1313702/100‑1 (MQ=255)
                 tACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACAAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACgg                                                                                   <  1:2009082/100‑1 (MQ=255)
                  aCCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGt                                                                                  >  2:1746554/1‑100 (MQ=255)
                   ccGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGt                                                                                  >  2:683470/1‑99 (MQ=255)
                   ccGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTg                                                                                 >  2:310887/1‑100 (MQ=255)
                   ccGTAGCGATGTGGAAGATGAGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTg                                                                                 >  2:1232367/1‑100 (MQ=255)
                    cGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGc                                                                                >  2:233876‑M2/1‑99 (MQ=255)
                        gCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGAACGAGCTTTATACGGTGcagga                                                                            <  1:723661‑M2/100‑6 (MQ=255)
                        gCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATACCTGAGACCGAGCTTTATACGGTGcagga                                                                            <  2:1986250‑M2/100‑6 (MQ=255)
                        ccgATCTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGcagga                                                                            >  1:1437026‑M2/2‑95 (MQ=255)
                           aTGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAaga                                                                         <  1:112488/100‑1 (MQ=255)
                             gtgGGAAATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAag                                                                          <  1:758395/97‑1 (MQ=255)
                             gtgGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGcaccgtataaagctcggtcacaggaatagc                                                                       <  1:1019048‑M1/100‑31 (MQ=255)
                             gtgGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAgg                                                                       <  1:784493/100‑1 (MQ=255)
                              tgGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGa                                                                      >  1:420738/1‑100 (MQ=255)
                              tgGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGa                                                                      >  1:636785/1‑100 (MQ=255)
                              tgGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGa                                                                      >  2:212006/1‑100 (MQ=255)
                              tgGAAAATGCGATTCGCCAAAGTACGAGTGGGCCGCATAATCTCGTTGTGCTGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAgg                                                                       <  2:218871/99‑1 (MQ=255)
                               ggAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAagatcgg                                                                     >  2:1437016/1‑96 (MQ=255)
                                gAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGcaccgtataaagctcggtcacaggaatagcgat                                                                    <  1:838466‑M1/100‑34 (MQ=255)
                                 aaGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATaa                                                                   >  2:1176512/1‑100 (MQ=255)
                                    aTGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAAc                                                                >  1:1408076/1‑100 (MQ=255)
                                    aTGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAAc                                                                <  1:1065032/100‑1 (MQ=255)
                                      gCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCg                                                              >  1:2186043/1‑100 (MQ=255)
                                       cGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAAc                                                                <  2:359355/97‑1 (MQ=255)
                                       cGATTCGCCAAAGGACCAGCGGGCCGCAAAAACTCGTTCGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCg                                                              >  2:1384785/1‑99 (MQ=255)
                                        gATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTg                                                            >  1:1309513/1‑100 (MQ=255)
                                         aTTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTgg                                                           >  2:1811441/1‑100 (MQ=255)
                                         aTTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTgg                                                           <  2:527702/100‑1 (MQ=255)
                                           tCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCTGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGTAAGAGGATAAAACCGTGGAg                                                         <  2:133755/100‑1 (MQ=255)
                                            cGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGc                                                        >  2:2214807/1‑100 (MQ=255)
                                             gCCAAAGTACCAGCGGGCCGCAAAAACTCGTTTGGCCGCTCATCGCGATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCg                                                       >  2:604490/1‑100 (MQ=255)
                                              ccAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCgg                                                      >  2:2156240/1‑100 (MQ=255)
                                              ccAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAACgg                                                      >  2:1908996/1‑100 (MQ=255)
                                                 aattcccAGCGGACAGCAAAAACTCGTCGTGACGCTGATCGTTATTCCTGTGACCGAGTTTTATACGGTGCACGAAGACGATAAAACCGTCCAGCGGaa                                                    <  2:1102586/94‑1 (MQ=255)
                                                 aaGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGaaa                                                   <  2:1069168/100‑1 (MQ=255)
                                                   gTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGAGGAAACg                                                 >  1:768597/1‑100 (MQ=255)
                                                    tACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGa                                                >  1:499761/1‑100 (MQ=255)
                                                     aCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTCAACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGaa                                               >  1:624918/1‑100 (MQ=255)
                                                     aCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGaa                                               >  1:271431/1‑100 (MQ=255)
                                                     aCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCATGGAGCGGAAACGaa                                               >  1:2210057/1‑100 (MQ=255)
                                                      ccAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAg                                              >  1:1342407/1‑100 (MQ=255)
                                                        aGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCTGAAACGAAg                                              >  2:1752883/1‑98 (MQ=255)
                                                        aGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGtt                                            <  1:553333/100‑1 (MQ=255)
                                                        aGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGtt                                            >  1:436870/1‑100 (MQ=255)
                                                         gCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGttt                                           <  2:83310/100‑1 (MQ=255)
                                                            ggCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTAt                                        <  2:2103562/100‑1 (MQ=255)
                                                            ggCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTAt                                        >  2:1841391/1‑100 (MQ=255)
                                                             gCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATc                                       <  1:1665808/100‑1 (MQ=255)
                                                             gCCGAAAAAAATCGTTGGGCCGCTCATCGATATTCCTGTGACCGAGCATTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGttt                                           <  1:560691/96‑1 (MQ=255)
                                                              ccGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATcc                                      <  1:1605236/100‑1 (MQ=255)
                                                              ccGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATcc                                      >  1:2087855/1‑100 (MQ=255)
                                                               cGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCa                                     >  2:1538066/1‑100 (MQ=255)
                                                                 cAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCAtt                                   >  2:512692/1‑100 (MQ=255)
                                                                  aaaaaCTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCAttt                                  >  1:556075/1‑100 (MQ=255)
                                                                   aaaaCTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCAtttt                                 <  1:212260/100‑1 (MQ=255)
                                                                    aaaCTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCAttttt                                <  2:1077557/100‑1 (MQ=255)
                                                                       cTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTg                               >  2:54766/1‑98 (MQ=255)
                                                                        tCGTTGGGCCGGTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGtt                            <  1:1721310/100‑1 (MQ=255)
                                                                        tCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGtt                            <  2:911898/100‑1 (MQ=255)
                                                                          gTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGTTAc                          >  1:1671185/1‑100 (MQ=255)
                                                                           ttGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATTCGGTGCAGGAAGAGGATAATACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGTTAcc                         <  2:1222400/100‑1 (MQ=255)
                                                                           ttGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGTTAcc                         <  1:1055763/100‑1 (MQ=255)
                                                                           ttGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGTTAcc                         >  2:581679/1‑100 (MQ=255)
                                                                             gggCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGTTACCTg                       <  2:2186028/100‑1 (MQ=255)
                                                                             gggCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGTTACCTg                       >  1:1581458/1‑100 (MQ=255)
                                                                             gggCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGTTACCTg                       >  1:1024963/1‑100 (MQ=255)
                                                                                ccGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGTTACCTGAGt                    >  1:1865885/1‑100 (MQ=255)
                                                                                 cGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGTTACCTGAGTc                   <  2:780864/100‑1 (MQ=255)
                                                                                  gCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGTTACCTGAGt                    <  1:745005/98‑1 (MQ=255)
                                                                                    tCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGTTACCTGAGTCAtt                <  2:2087841/100‑1 (MQ=255)
                                                                                    tCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGTTACCTGAGTCAtt                <  1:980262/100‑1 (MQ=255)
                                                                                      aTCGCTATTCCTGTGACCGAGCTTTATACGGTGcaggaatagcgatgagcggcccaacgagtttttgcggcccgctggtactttggcgaatcgcatcttc              <  1:838466‑M2/100‑68 (MQ=255)
                                                                                       tCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGTTACCTGAGTCAttgat             <  1:1050217/100‑1 (MQ=255)
                                                                                         gCTATTCCTGTGACCGAGCTTTATACGGTGcaggaatagcgatgagcggcccaacgagtttttgcggcccgctggtactttggcgaatcgcatcttccac           <  1:1019048‑M2/100‑71 (MQ=255)
                                                                                         gCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGTTACCTGAGTCAttgatgg           >  1:1578162/1‑100 (MQ=255)
                                                                                         gCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGTTACCTGAGTCAttgatgg           >  2:128141/1‑100 (MQ=255)
                                                                                         gCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGTTACCTGAGTCAttgatgg           <  1:281350/100‑1 (MQ=255)
                                                                                            aTTCCTGTGACCGAGCTTTATACGGTGcaggaatagcgatgagcggcccaacgagtttttgcggcccgctggtactttggcgaatcgcatcttccacatc        <  1:1987887‑M2/100‑74 (MQ=255)
                                                                                              ttctgcaccgtataaagctcggtcacaggaatagcgatgagcggcccaacgagtttttgcggcccgctggtactttggcgaatcgcatcttccacatcgc      <  1:54374‑M1/98‑96 (MQ=255)
                                                                                              tCCTGcaccgtataaagctcgttcacaggaatagcgatgagcggcccaacgagtttttgcggcccgctggtactttggcgaatcgcatcttccacatcgc      <  1:723661‑M1/100‑96 (MQ=255)
                                                                                              tCCTGcaccgtataaagctcggtctcaggtatagcgatgagcggcccaacgagtttttgcggcccgctggtactttggcgaatcgcatcttccacatcgc      <  2:1986250‑M1/100‑96 (MQ=255)
                                                                                               ccTGTGACCTAGCTTTATACGGTGCAGGAAGAGGATAAAATCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGTTACCTGAGTCAttgatggttgatg     <  2:1485021/100‑1 (MQ=255)
                                                                                                cTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGTTACCTGAGTCAttgatggttgatgg    >  1:1448177/1‑100 (MQ=255)
                                                                                                 tgtgACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGTTACCTGAGTCATTGATGGTTGATGGc   >  2:564038/1‑100 (MQ=255)
                                                                                                  gtgACCGATATTTAAACGGTGCAGGAATAATATAAATCCGTAGAGCGGAAACGAAGTTTCATCCATTTTTGGTTACCTGAGTCAttcatggttcatgc    <  2:310573/98‑2 (MQ=255)
                                                                                                  gtgACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGTTACCTGAGTCATTGATGGTTGATGGCa  >  1:1205447/1‑100 (MQ=255)
                                                                                                  gcaccgtataaagctcggtcacaggaatagcgatgagcggcccaacgagtttttgcggcccgctggtactttggcgaatcgcatcttccacatcgctacg  >  2:233876‑M1/1‑1 (MQ=255)
                                                                                                  |                                                                                                   
TTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGTTACCTGAGTCATTGATGGTTGATGGCA  >  NC_000913/4638269‑4638466

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.