| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2066832 | 0 (0.000) | 11 (0.150) | 4/160 | NT | 100% | noncoding (522/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | = 2066857 | NA (NA) | noncoding (497/1195 nt) | IS5 | repeat region | |||||
CACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAGCTGGGTGCCTCAATGATGGTGGCATCGACCAAGGTGCCTTGAGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCTTGAACAATT > NC_000913/2066739‑2066927 | cacCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTCCTGCTCTTTCTTCTTGGTCGAcctg > 2:1267058‑M1/1‑94 (MQ=255) tGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcatttaggcacccagctcgacca < 2:768837‑M1/100‑33 (MQ=255) ccACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaag < 2:882933‑M1/100‑35 (MQ=255) ccACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaag < 1:635089‑M1/100‑35 (MQ=255) ccACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaag < 2:341083‑M1/100‑35 (MQ=255) aCTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaa < 1:1389452‑M1/100‑37 (MQ=255) cTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaac < 2:1828509‑M1/100‑38 (MQ=255) cTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaac < 1:1333617‑M1/100‑38 (MQ=255) cTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaac < 2:1813175‑M1/100‑38 (MQ=255) cTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaac < 2:1407034‑M1/100‑38 (MQ=255) cTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaa < 1:23305‑M1/99‑37 (MQ=255) tGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaac < 1:173806‑M1/99‑38 (MQ=255) cTTGGTCGAtgccaccatcattgaggctcccatcttgaccaagaacaaatagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg < 2:555847‑M1/100‑92 (MQ=255) cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg < 2:273487‑M1/100‑92 (MQ=255) cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg < 2:1970315‑M1/100‑92 (MQ=255) cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg > 2:1285997‑M1/1‑9 (MQ=255) cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg < 2:1444105‑M1/100‑92 (MQ=255) cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg < 1:1018723‑M1/100‑92 (MQ=255) cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg < 2:1115681‑M1/100‑92 (MQ=255) cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg > 1:949216‑M1/1‑9 (MQ=255) cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg > 2:249227‑M1/1‑9 (MQ=255) cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg > 2:267260‑M1/1‑9 (MQ=255) cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg < 2:617150‑M1/100‑92 (MQ=255) cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg < 1:1337180‑M1/100‑92 (MQ=255) ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaatgagcagcaacgcgatccggagatgcatcataccaagaaaggcaatcagtggc < 2:465647‑M1/100‑93 (MQ=255) ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc < 2:2191689‑M1/100‑93 (MQ=255) ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc < 2:1580771‑M1/100‑93 (MQ=255) ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc > 2:749520‑M1/1‑8 (MQ=255) ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc < 2:926259‑M1/100‑93 (MQ=255) ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc < 1:1849735‑M1/100‑93 (MQ=255) ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc < 2:1309161‑M1/100‑93 (MQ=255) ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc < 1:1264465‑M1/100‑93 (MQ=255) ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc < 1:446629‑M1/100‑93 (MQ=255) ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc < 1:551957‑M1/100‑93 (MQ=255) ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg < 1:1753347‑M1/99‑92 (MQ=255) ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaacgcaatcagtggc < 1:1471216‑M1/100‑93 (MQ=255) ttGGTCGAtgccaccatcattgaggcacccagctcgaacaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc < 2:430769‑M1/100‑93 (MQ=255) tGGTCGAtgccaccatcattgaggcacccagcttgaccaagaacaaagagcagcaacgcgatccggtgatgcatcagaccaagaaaggcaatcagtggc < 2:459067‑M1/99‑93 (MQ=255) tGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatccgtggca > 1:1457964‑M1/1‑7 (MQ=255) tGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcataagaccaagaaaggcaatcagtggca > 2:898404‑M1/1‑7 (MQ=255) tGGTCGAtgccaccagcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccgcagatgcatcagaccaagaaaggcaatcagtgg < 2:1933987‑M1/98‑92 (MQ=255) ggTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcac > 2:2223877‑M1/1‑6 (MQ=255) ggTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcac > 1:639951‑M1/1‑6 (MQ=255) ggTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcac > 1:732129‑M1/1‑6 (MQ=255) ggTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcac < 1:2002271‑M1/100‑95 (MQ=255) ggTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcac > 1:162590‑M1/1‑6 (MQ=255) gTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcact > 1:1110190‑M1/1‑5 (MQ=255) gTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcact > 2:7278‑M1/1‑5 (MQ=255) gTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcact > 2:2202751‑M1/1‑5 (MQ=255) gTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcact > 2:1952829‑M1/1‑5 (MQ=255) gTCGAtgccaccatcattgaggcacccagctagaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcactcagtggcact > 2:213770‑M1/1‑5 (MQ=255) gTCGAtgccaccatcaatcaaacacccagctcgaccaagaacaaagagcagcaacgcgatccggagaggcatcagaacaagaaaggcaatcagtggcact > 2:1952354‑M1/1‑5 (MQ=255) | CACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAGCTGGGTGCCTCAATGATGGTGGCATCGACCAAGGTGCCTTGAGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCTTGAACAATT > NC_000913/2066739‑2066927 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |