BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2440342	NA (NA)	3 (0.040)	3/166	NT	NA	intergenic (‑222/+43)	yfcJ/fabB	putative arabinose efflux transporter/3‑oxoacyl‑[acyl‑carrier‑protein] synthase I
*	?	NC_000913	= 2440374	NA (NA)	3 (0.040)	3/166	NT	NA	noncoding (32/36 nt)	REP170 (repetitive extragenic palindromic) element; contains 1 REP sequences	REP170 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 106 total aligned reads displayed.

GTTTGCCTGGAACTGGCGGCGATTGTCAATGATGTGAAAAAGGGAACCATCAGGTTCCCTTTTGCGTTAGTGCCGGAGGCCGCATTGGCGCGTAACGTCGGATGCGACGCTGGCGCGTCTACTCCGACCTACTGCGAATTAATCTTTCAGCTTGCGCATTACCAGCGTGGCGTTGGTGCCGCCGAAGCCGAAGC  >  NC_000913/2440247‑2440440

ttccgatctgaactggcggCGATTGTCAATGATGTGAAAAAGGGAACCATCAGGTTCCCTTTTGCGTTAGTGCCGGAGGCCGCATTGGCGCGTAACgtcg                                                                                                <  1:1685703‑M1/91‑5 (MQ=255)

gTTTGCCTGGAACTGGCGGCGATTGTCAATGATGTGAAAAAGGGAACCATCAGGTTGCCTTTTGCGTTAGTGCCGGAGGCCGCATTGGCGCGTAACgtcg                                                                                                >  2:1978838‑M1/1‑96 (MQ=255)

   tGCCTGGAACTGGCGGCGATTGTCAATGATGTGAAAAAGGGAACCATCAGGTTCCCTTTTGCGTTAGTGCCGGAGGCCGCATTGGCGCGTAACGTCGGAt                                                                                             <  2:1977601/100‑1 (MQ=255)

   tGCCTGGAACTGGCGGCGATTGTCAATGATGTGAAAAAGGGAACCATCAGGTTCCCTTTTGCGTTAGTGCCGGAGGCCGCATTGGCGCGTAACGTCGGAt                                                                                             <  1:1762144/100‑1 (MQ=255)

    gCCTGGAACTGGCGGCGATTGTCAATGATGTGAAAAAGGGAACCATCAGGTTCCCTTTTGCGTTAGTGCCGGAGGCCGCATTGGCGCGTAACGTCGGATg                                                                                            <  1:1676739/100‑1 (MQ=255)

     ccTGGAACTGGCGGCGATTGTCAATGATGTGAAAAAGGGAACCATCAGGTTCCCTTTTGCGTTAGTGCCGGAGGCCGCATTGGCGCGTAACGTCGGATGc                                                                                           <  1:1960972/100‑1 (MQ=255)

     ccTGGAACTGGCGGCGATTGTCAATGATGTGAAAAAGGGAACCATCAGGTTCCCTTTTGCGTTAGTGCCGGAGGCCGCATTGGCGCGTAACGTCGGATGc                                                                                           <  1:2192179/100‑1 (MQ=255)

      cTGGAACTGGCGGCGATTGTCAATGATGTGAAAAAGGGAACCATCAGGTTCCCTTTTGCGTTAGTGCCGGAGGCCGCATTGGCGCGTAACGTCGGATGc                                                                                           <  1:2055815/99‑1 (MQ=255)

      cTGGAACTGGCGGCGATTGTCAATGATGTGAAAAAGGGAACCATCAGGTTCCCTTTTGCGTTAGTGCCGGAGGCCGCATTGGCGCGTAACGTCGGATGCg                                                                                          >  1:667636/1‑100 (MQ=255)

        ggAACTGGCGGCGATTGTCAATGATGTGAAAAAGGGAACCATCAGGTTCCCTTTTGCGTTAGTGCCGGAGGCCGCATTGGCGCGTAACGTCGGATGCGa                                                                                         >  1:77759/1‑99 (MQ=255)

        ggAACTGGCGGCGATTGTCAATGATGTGAAAAAGGGAACCATCAGGTTCCCTTTTGCGTTAGTGCCGGAGGCCGCATTGGCGCGTAACGTCGGATGCGAc                                                                                        <  1:1734302/100‑1 (MQ=255)

         gAACTGGCGGCGATTGTCAATGATGTGAAAAAGGGAACCATCAGGTTCCCTTTTGCGTTAGTGCCGGAGGCCGCATTGGCGCGTAACgtcgagatcggaa                                                                                       >  2:1685692‑M1/1‑87 (MQ=255)

         gAACTGGCGGCGATTGTCAATGATGTGAAAAAGGGAAACATCAGGTTCCTTTTTGCGTTAGTGCCGGAGGCCGCATTGGCGCGTAACGTCGTATGCGatg                                                                                       >  2:451446/1‑98 (MQ=255)

          aaCTGGCGGCGATTGTCAATGATGTGAAAAAGGGAACCATCAGGTTCCCTTTTGCGTTAGTGCCGGAGGCCGCATTGGCGCGTAACGTCGGATGCGACg                                                                                       <  1:1463982/99‑1 (MQ=255)

           aCTGGCGGCGATTGTCAATGATGTGAAAAAGGGAACCATCAGGTTCCCTTTTGCGTTAGTGCCGGAGGCCGCATTGGCGCGTAACGTCGGATGCGACGCt                                                                                     >  2:1360010/1‑100 (MQ=255)

            cTGGCGGCGATTGTCAATGATGTGAAAAAGGGAACCATCAGGTTCCCTTTTGCGTTAGTGCCGGAGGCCGCATTGGCGCGTAACGTCGGATGCGACGCTg                                                                                    <  2:1655557/100‑1 (MQ=255)

              ggcggcGATTGTCAATGATGTGAAAAAGGGAACCATCAGGTTCCCTTTTGCGTTAGTGCCGGAGGCCGCATTGGCGCGTAACGTCGGATGCGACGCTGgc                                                                                  >  2:1667869/1‑100 (MQ=255)

              ggcggcGATTGTCAATGATGTGAAAAAGGGAACCATCAGGTTCCCTTTTGCGTTAGTGCCGGAGGCCGCAATGGCGCGTAACGTCGGATGCGACGCTGgc                                                                                  >  2:331572/1‑100 (MQ=255)

                cggcgATTGTCAATGATGTGAAAAAGGGAACCATCAGGTTCCCTTTTGCGTTAGTGCCGGAGGCCGCATTGGCGCGTAACGTCGGATGCGACGCTGgcg                                                                                 >  2:649262/1‑99 (MQ=255)

                 ggcgATTGTCAATGATGTGAAAAAGGGAACCATCAGGTTCCCTTTTGCGTTAGTGCCGGAGGCCGCATTGGCGCGTAACGTCGGATGTGACGCTGGcgcg                                                                               <  1:995823/100‑1 (MQ=255)

                   cgATTGTCAATGATGTGAAAAAGGGAACCATCAGGTTCCCTTTTGCGTTAGTGCCGGAGGCCGCATTGGCGCGTAACGTCGGATGCGACGCTGGCGCGTc                                                                             <  1:1537781/100‑1 (MQ=255)

                   cgATTGTCAATGATGTGAAAAAGGGAACCATCAGGTTCCCTTTTGCGTTAGTGCCGGAGGCCGCATTGGCGCGTAACGTCGGATGCGACGCTGGCGCGTc                                                                             <  2:1060950/100‑1 (MQ=255)

                    gATTGTCAATGATGTGAAAAAGGGAACCATCAGGTTCCCTTTGGCGTTAGTGCCGGAGGCCGCAGTGGCGCGTAACGTCGGATGCGACGCTGGCGCGTCt                                                                            <  2:1577852/100‑1 (MQ=255)

                      ttGTCAATGATGTGAAAAAGGGAACCATCAGGTTCCCTTTTGCGTTAGTGCCGGAGGCCGCATTGGCGCGTAACGTCGGATGCGACGCTGGCGCGTCTa                                                                           <  1:246606/99‑1 (MQ=255)

                      ttGTCAATGATGTGAAAAAGGGAACCATCAGGTTCCCTTTTGCGTTAGTGCCGGAGGCCGCATTGGCGCGTAACGTCGGATGCGACGCTGGCGCGTCTAc                                                                          >  2:2140648/1‑100 (MQ=255)

                      ttGTCAATGATGTGAAAAAGGGAACCATCAGGTTCCCTTTTGCGTTAGTGCCGGAGGCCGCATCGGCGCGTAACGTCGGATGCGACGCTGGCGCGTCTAc                                                                          <  1:1580460/100‑1 (MQ=255)

                       tGTCAATTATGTGAAAAAGGGAACCATCAGGTTCCCTTTTGCGTTAGTGCCGGAGGTCGCATTGGCGCGTAACGTCGGATGCGACGCTGGCGCGTCTACT                                                                         >  2:1020432‑M2/1‑100 (MQ=255)

                        gTCAATGATGTGAAAAAGGGAACCATCAGGTTCCCTTTTGCGTTAGTGCCGGAGGCCGCATTGGCGCGTAACGTCGGATGCGACGCTGGCGCGTCTACT                                                                         <  1:216769‑M2/99‑1 (MQ=255)

                         tCAATGATGTGAAAAAGGGAACCATCAGGTTCCCTTTTGCGTTAGTGCCGGAGGCCGCATTGGCGCGTAACGTCGGATGCGACGCTGGCGCGTCTACTCC                                                                       <  1:1442327‑M2/100‑1 (MQ=255)

                          cAATGATGTGAAAAAGGGAACCATCAGGTTCCCTTTTGCGTTAGTGCCGGAGGCCGCATTGGCGCGTAACGTCGGATGCGACGCTGGCGCGTCTACTCCG                                                                      <  1:300221‑M2/100‑1 (MQ=255)

                           aaTGATGTGAAAAAGGGAACCATCAGGTTCCCTTTTGCGTTAGTGCCGGAGGCCGCATTGGCGCGTAACGTCGGATGCGACGCTGGCGCGTCTACTCCGA                                                                     >  1:1319350‑M2/1‑100 (MQ=255)

                            atgatgTGAAAAAGGGAACCATCAGGTTCCCTTTTGCGTTAGTGCCGGAGGCCGCATTGGCGCGTAACGTCGGATGCGACGCTGGCGCGTCTACTCCGAC                                                                    <  1:1806756‑M2/100‑1 (MQ=255)

                             tgatgTGAAAAAGGGAACCATCAGGTTCCCTTTTGCGTTAGTGCCGGAGGCCGCATTGTCGAGTAACGTCGGATGCAATTTTGGCTCGTCTACTACGAcc                                                                   <  2:475112/100‑1 (MQ=255)

                             tgatgTGAAAAAGGGAACCATCAGGTTCCCTTTTGCGTTAGTGCCGGAGGCCGCATTGGCGCGTAACGTCGGATGCGACGCTGGCGCGTCTACTCCGAcc                                                                   <  1:1331128/100‑1 (MQ=255)

                               atgTGAAAAAGGGAACCATCAGGTTCCCTTTTGCGTTAGTGCCGGAGGCCGCATTGGCGCGTAACgtcggagtagacgcgccagcgtcgcatccgacgtt                                                                 <  1:2228726‑M1/100‑36 (MQ=255)

                                 gtgAAAAAGGGAACCATCAGGTTCCCTTTTGCGTTAGTGCCGGAGGCCGCATTGGCGCGTAACGTCGGATGCGACGCTGGCGCGTCTACTCCGACCTACt                                                               <  1:1360016/100‑1 (MQ=255)

                                  tgAAAAAGGGAACCATCAGGTTCCCTTTTGCGTTAGTGCCGGAGGCCGCATTGGCGCGTAACgtcggagtagacgcgccagcgtcgcatccgacgttacg                                                              <  1:1320505‑M1/100‑39 (MQ=255)

                                  tgAAAAAGGGAACCATCAGGTTCCCTTTTGCGTTAGTGCCGGAGGCCGCATTGGCGCGTAACGTCGGATGCGACGCTGGCGCGTCTACTCCGACCTACTg                                                              >  2:2005078/1‑100 (MQ=255)

                                  tgAAAAAGGGAACCATCAGGTTCCCTTTTGCGTTAGTGCCGGAGGCCGCATTGGCGCGTAACGTCGGATGCGACGCTGGCGCGTCTACTCCGACCTACTg                                                              >  2:755820/1‑100 (MQ=255)

                                   gAAAAAGGGAACCATCAGGTTCCCTTTTGCGTTAGTGCCGGAGGCCGCATTGGCGCGTAACGTCGGATGCGACGCTGGCGCGTCTACTCCGACCTACTGc                                                             >  2:1125581/1‑100 (MQ=255)

                                    aaaaaGGGAACCATCAGGTTCCCTTTTGCGTTAGTGCCGGAGGCCGCATTGGCGCGTAACgtcggagtagacgcgccagcgtcgcatccgacgttacgcg                                                            <  1:1782884‑M1/100‑41 (MQ=255)

                                    aaaaaGGGAACCATCAGGTTCCCTTTTACGTTAGTGCCGGAGGCCGCATCGGCGCGTAACGTCGGATGCCACGCTGGCGCGTCTACTCCGACCTACTGCg                                                            <  2:1897085/100‑1 (MQ=255)

                                       aaGGGAACCATCAGGTTCTCATTTGCGTTAGTGCCGGAGCCCGCATTTGCTCGTAACGTCGGATGCGACGCTGTCGCGTCTATTCCGACCTACTGCGAAt                                                         <  2:2159502/100‑1 (MQ=38)

                                       aaGGGAACCATCAGGTTCCCTTTTGCGTTAGTGCCGGAGGCCGCATTGGCGCGTAACGTCGGATGCGACGCTGGCGCGTCTACTCCGACCTACTGCGAAt                                                         <  2:2136148/100‑1 (MQ=255)

                                       aaGGGAACCATCAGGTTCCCTTTTGCGTTAGTGCCGGAGGCCGCATTGGCGCGTAACGTCGGATGCGACGCTGGCGCGTCTACTCCGACCTACTGCGAAt                                                         <  1:1086350/100‑1 (MQ=255)

                                        aGGGAACCATCAGGTTCCCTTTTGCGTTAGTGCCGGAGGCCGCATTGGCGCGTAACGTCGGATGCGACGCTGGCGCGTCTACTCCGACCTACTGCGAAtt                                                        >  1:1264553/1‑100 (MQ=255)

                                        aGGGAACCATCAGGTTCCCTTTTGCGTTAGTGCCGGAGGCCGCATTGGCGCGTAACGTCGGATGCGACGCTGGCGCGTCTACTCCGACCTACTGCGAAtt                                                        <  2:907419/100‑1 (MQ=255)

                                        aGGGAACCATCAGGTTCCCTTTTGCGTTAGTGCCGGAGGCCGCATTGGCGCGTAACGTCGGATGCGACGCTGGCGCGTCTACTCCGACCTACTGCGAAtt                                                        >  2:601748/1‑100 (MQ=255)

                                        aGGGAACCATCAGGTTCCCTTTTGCGTTAGTGCCGGAGGCCGCATTGGCGCGTAACGTCGGAAGCGACGCTGGCGCGTCTACTCCGACCTACTGCGAAtt                                                        <  2:1202293/100‑1 (MQ=255)

                                          ggAACCATCAGGTTCCCTTTTGCGTTAGTGCCGGAGGCCGCATTGGCGCGTAACGTCGGATGCGACGCTGGCGCGTCTACTCCGACCTACTGCGAATTaa                                                      <  1:648721/100‑1 (MQ=255)

                                           gAACCATCAGGTTCCCTTTTGCGTTAGTGCCGGAGGCCGCATTGGCGCGTAACGTCGGATGCGACGCTGGCGCGTCTACTCCGACCTACTGCGAATTAAt                                                     >  2:1763306/1‑100 (MQ=255)

                                           gAACCATCAGGTTCCCTTTTGCGTTAGTGCCGGAGGCCGCATTGGCGCGTAACGTCGGATGCGACGCTGGCGCGTCTACTCCAACCTACTGCGAATTAAt                                                     >  1:1400023/1‑100 (MQ=255)

                                            aaCTATCAGGTTCCCTTTTGCGTTAGTGCCGGAGGCCGCATTGGCTCGTAACGTCGGATGCGACGCTGGCGCGTCTTTTCCGACCTACTGCGAATTAATc                                                    <  2:265942/100‑1 (MQ=38)

                                            aaCCATCAGGTTCCCTTTTGCGTTAGTGCCGGAGGCCGCATTGGCGCGTAACGTCGGATGCGACGCTGGCGCGTCTACTCCGACCTACTGCGAATTAATc                                                    <  1:1265071/100‑1 (MQ=255)

                                            aaCCATCAGGTTCCCTTTTGCGTTAGTGCCGGAGGCCGCATTGGCGCGTAACGTCGGATGCGACGCTGGCGCGTCTACTCCGACCTACTGCGAATTAATc                                                    <  2:609799/100‑1 (MQ=255)

                                              ccATCAGGTTCCCTTTTGCGTTAGTGCCGGAGGCCGCATTGGCGCGTAACGTCGGATGCGACGCTGGCGCGTCTACTCCGACCTACTGCGAATTAATCtt                                                  <  1:1903476/100‑1 (MQ=255)

                                              ccATCAGGTTCCCTTTTGCGTTAGTGCCGGAGGCCGCATTGGCGCGTAACGTCGGATGCGACGCTGGCGCGTCTACTCCGACCTACTGCGAATTAATCtt                                                  <  1:1742456/100‑1 (MQ=255)

                                                 tCAGGTTCCCTTTTGCGTTAGTGCCGGAGGCCGCATTGGCGCGTAACGTCGGATGCGACGCTGGCGCGTCTACTCCGACCTACTGCGAATTAATCTTTc                                                <  2:2191940/99‑1 (MQ=255)

                                                    ggTTCCCTTTTGCGTTAGTGCCGGAGGCCGCATTGGCGCGTAACGTCGGATGCGACGCTGGCGCGTCTACTCCGACCTACTGCGAATTAATCTTTCAGCt                                            >  2:349882/1‑100 (MQ=255)

                                                       tCCCTTTTGCGTTAGTGCCGGAGGCCGCATTGGCGCGTAACGTCGGATGCGACGCTGGCGCGTCTACTCCGACCTACTGCGAATTAATCTTTCAGCTTgc                                         <  2:144174/100‑1 (MQ=255)

                                                        cccTTTTGCGTTAGTGCCGGAGGCCGCATTGGCGCGTAACGTCGGATGCGACGCTGGCGCGTCTACTCCGACCTACTGCGAATTAATCTTTCAGCTTgcg                                        <  1:1622087/100‑1 (MQ=255)

                                                         ccTTTTGCGTTAGTGCCGGAGGCCGCATTGGCGCGTAACGTCGGATGCGACGCTGGCGCGTCTACTCCGACCTACTGCGAATTAATCTTTCAGCTTgcgc                                       <  1:2140663/100‑1 (MQ=255)

                                                          cTTTTGCGTTAGTGCCGGAGGCCGCATTGGCGCGTAACGTCGGATGCGACGCTGGCGCGTCTACTCCGACCTACTGCGAATTAATCTTTCAGCTTGCGCa                                      >  1:2051/1‑100 (MQ=255)

                                                          cTTTTGCGTTAGTGCCGGAGGCCGCATTGGCGCGTAACGTCGGATGCGACGCTGGCGCGTCTACTCCGACCTACTGCGAATTAATCTTTCAGCTTGCGCa                                      >  1:1570909/1‑100 (MQ=255)

                                                              tGCGTTAGTGCCGGAGGCCGCATTGGCGCGTAACGTCGGATGCGACGCTGGCGCGTCTACTCCGACCTACTGCGAATTAATCTTTCAGCTTGCGCATTAc                                  <  1:1260962/100‑1 (MQ=255)

                                                                cGTTAGTGCCGGAGGCCGCATTGGCGCGTAACGTCGGATGCGACGCTGGCGCGTCTACTCCGACCTACTGCGAATTAATCTTTCAGCTTGCGCATTACCa                                >  1:170411/1‑100 (MQ=255)

                                                                cGTTAGTCCCGGAGGACGCATAGGCGAGTAACGTCGGATGCGACGCTGACGCGAATACACCGACCTACTAGGAATTAATCTTTCAGCTTACACATTAcaa                                >  2:865988/1‑98 (MQ=255)

                                                                 nttAGTGCCGGAGGCCGCATTGGCGCGTAACGTCGGATGCGACGCTGGCGCGTCTACTCCGACCTACTGCGAATTAATCTTTCAGCTTGCGCATTACCAg                               >  2:1012080/2‑100 (MQ=255)

                                                                 gTTAGTGCCGGAGGCCGCATTGGCGCGTAACGTCGGATGCGACGCTGGCGCGTCTACTCCGACCTACTACGAATTAATCTTTCAGCTTGCGCATTACCAg                               >  1:1825923/1‑100 (MQ=255)

                                                                  ttAGTGCCCGAGGCCGCATTGGCGCGTAACGTCGGATGCGACGCTGGCGCGTCTACTCCGACCTACTGCGAATTAATCTTTCAGCTTGCGCATTAcc                                 <  2:1871024/97‑1 (MQ=255)

                                                                   naGTGCCGGAGGCCGCATTGGCGCGTAACGTCGGATGCGACGCTGGCGCGTCTACTCCGACCTACTGCGAATTAATCTTTCAGCTTGCGCATTACCAGCg                             >  1:519270/2‑100 (MQ=255)

                                                                      tGCCGGAGGCCGCATTGGCGCGTAACGTCGGATGCGACGCTGGCGCGTCTACTCCGACCTACTGCGAATTAATCTTTCAGCTTGCGCATTACCAGCGTgg                          >  1:1755641/1‑100 (MQ=255)

                                                                      tGCCGGAGGCCGCATTGGCGCGTAACGTCGGATGCGACGCTGGCGCGTCTACTCCGACCTACTGCGAATTAATCTTTCAGCTTGCGCATTACCAGCGTgg                          <  1:1180865/100‑1 (MQ=255)

                                                                      tGCCGGAGGCCGCATTGGCGCGTAACGTCGGATGCGACGCTGGCGCGTCTACTCCGACCTACTGCGAATTAATCTTTCAGCTTGCGCATTACCAGCGTgg                          <  1:1157550/100‑1 (MQ=255)

                                                                      tGCCGGAGGCCGCATTGGCGCGTAACGTCGGATGCGACGCTGGCGCGTCTACTCCGACCTACTGCGAATTAATCTTTCAGCTTGCGCATTACCAGCGTgg                          <  1:2035333/100‑1 (MQ=255)

                                                                       ggcGGAGGCCGCATTGGCGCGTAACGTCGGATGCGACGCTGGCGCGTCTACTCCGACCTACTGCGAATTAATCTTTCAGCTTGCGCATTACCAGCg                             <  1:956624/94‑1 (MQ=255)

                                                                           gAGGCCGCATTGGCGCGTAACGTCGGATGCGACGCTGGCGCGTCTACTCCGACCTACTGCGAATTAATCTTTCAGCTTGCGCATTACCAGCGTGGCGTTg                     <  1:114819/100‑1 (MQ=255)

                                                                           gAGGCCGCATTGGCGCGTAACGTCGGATGCGACGCTGGCGCGTCTACTCCGACCTACTGCGAATTAATCTTTCAGCTTGCGCATTACCAGCGTGGCGTTg                     <  2:2182503/100‑1 (MQ=255)

                                                                           gAGGCCGCATTGGCGCGTAACGTCGGATGCGACGCTGGCGCGTCTACTCCGACCTACTGCGAATTAATCTTTCAGCTTGCGCATTACCAGCGTGGCGTTg                     <  1:346047/100‑1 (MQ=255)

                                                                            aGGCCGCATTGGCGCGTAACGTCGGATGCGACGCTGGCGCGTCTACTCCGACCTACTGCGAATTAATCTTTCAGCTTGCGCATTACCAGCGTGGCGTTgg                    <  2:533097/100‑1 (MQ=255)

                                                                              gttgaaTTGGCGCGTAACGTCGGATGCGACGCTGGCGCGTCTACTCCGACCTACTGCGAATTACTCTTTCAGCTTGCGCATTACCAGCGTGGCGTTGGTg                  <  1:382790/95‑1 (MQ=255)

                                                                              gCCGCATTGGCGCGTAACGTCGGATGCGACGCTGGCGCGTCTACTCCGACCTACTGCGAATTAATCTTTCAGCTTGCGCATTACCAGCGTGGCGTTGGTg                  <  2:170411/100‑1 (MQ=255)

                                                                               ccGCATTGGCGCGTAACGTCGGATGCGACGCTGGCGCGTCTACTCCGACCTACTGCGAATTAATCTTTCAGCTTGCGCATTACCAGCGTGGCGTTGGTgc                 >  1:2046243/1‑100 (MQ=255)

                                                                               ccGCATTGGCGCGTAACGTCGGATGCGACGCTGGCGCGTCTACTCCGACCTACTGCGAATTAATCTTTCAGCTTGCGCATTACCAGCGTGGCGTTGGTgc                 <  1:2149875/100‑1 (MQ=255)

                                                                                  cATTGGCGCGTAACGTCGGATGCGACGCTGGCGCGTCTACTCCGACCTACTGCGAATTAATCTTTCAGCTTGCGCATTACCAGCGTGGCGTTGGTgccgc              <  2:1395061/100‑1 (MQ=255)

                                                                                  cATTGGCGCGTAACGTCGGATGCGACGCTGGCGCGTCTACTCCGACCTACTGCGAATTAATCTTTCAGCTTGCGCATTACCAGCGTGGCGTTGGTgccgc              <  1:855373/100‑1 (MQ=255)

                                                                                     tGGCGCGTAACGTCGGATGCGACGCTGGCGCGTCTACTCCGACCTACTGCGAATTAATCTTTCAGCTTGCGCATTACCAGCGTGGCGTTGGTgccgcc             <  2:47904/98‑1 (MQ=255)

                                                                                     tGGCGCGTAACGTCGGATGCGACGCTGGCGCGTCTACTCCGACCTACTGCGAATTAATCTTTCAGCTTGCGCATTACCAGCGTGGCGTTGGTGCCgccga           <  1:1827004/100‑1 (MQ=255)

                                                                                      ggCGCGTAACGTCGGATGCGACGCTGGCGCGTCTACTCCGACCTACTGCGAATTAATCTTTCAGCTTGCGCATTACCAGCGTGGCGTTGGTGCCgccgaa          >  1:84365/1‑100 (MQ=255)

                                                                                       gcgcGTAACGTCGGATGCGACGCTGGCGCGTCTACTCCGACCTACTGCGAATTAATCTTTCAGCTTGCGCATTACCAGCGTGGCGTTGGTGCCgccgaag         <  1:2092640/100‑1 (MQ=255)

                                                                                        cgcgTAACGTCGGATGCGACGCTGGCGCGTCTACTCCGACgttacgcgccaatgcggcctccggcactaacgcaaaagggaacctgatggttcccttttt        <  1:1782884‑M2/100‑61 (MQ=255)

                                                                                        cgcgTAACGTCGGATGCGACGCTGGCGCGTCTACTCCGACCTACTGCGAATTAATCTTTCAGCTTGCGCATTACCAGCGTGGCGTTGGTGCCgccgaagc        >  2:1416884/1‑100 (MQ=255)

                                                                                         gcgTAACGTCGGATGCGACGCTGGCGCGTCTACTCCGACCTACTGCGAATTAATCTTTCAGCTTGCGCATTACCAGCGTGGCGTTGGTGCCgccgaagcc       <  1:498280/100‑1 (MQ=255)

                                                                                         gcgTAACGTCGGATGCGACGCTGGCGCGTCTACTCCGACCTACTGCGAATTAATCTTTCAGCTTGCGCATTACCAGCGTGGCGTTGGTGCCgccgaagcc       <  1:1482480/100‑1 (MQ=255)

                                                                                          cgTAACGTCGGATGCGACGCTGGCGCGTCTACTCCGACgttacgcgccaatgcggcctccggcactaacgcaaaagggaacctgatggttccctttttca      <  1:1320505‑M2/100‑63 (MQ=255)

                                                                                           gTAACGTCGGATGCGACGCTGGCGCGTCTACTCCGACCTACTGCGAATTAATCTTTCAGCTTGCGCATTACCAGCGTGGCGTTGGTGCCgccgaagccga     >  2:245364/1‑100 (MQ=255)

                                                                                           gTAACGTCGGATGCGACGCTGGCGCGTCTACTCCGACCTACTGCGAATTAATCTTTCAGCTTGCGCATTACCAGCGTGGCGTTGGTGCCgccgaagccga     <  2:2019097/100‑1 (MQ=255)

                                                                                             aaCGTCGGATGCGACGCTGGCGCGTCTACTCCGACgttacgcgccaatgcggcctccggcactaacgcaaaagggaacctgatggttccctttttcacat   <  1:2228726‑M2/100‑66 (MQ=255)

                                                                                             aaCATCAGATGCGACACCCACGCGTCTGCTCTGACCTACTGCAAATTAATCTTTCAGCATGCGCATTACCATCGTTGCGTTGGTGCCgccgaagccga     <  2:1596017/98‑1 (MQ=255)

                                                                                              aCGTCGGATGCGACGCTGGCGCGTCTACTCCGACCTACTGCGAATTAATCTTTCAGCTTGCGCATTACCAGCGTGGCGTTGGTGCCGCcgaagccgaagc  <  1:1988899/100‑1 (MQ=255)

GTTTGCCTGGAACTGGCGGCGATTGTCAATGATGTGAAAAAGGGAACCATCAGGTTCCCTTTTGCGTTAGTGCCGGAGGCCGCATTGGCGCGTAACGTCGGATGCGACGCTGGCGCGTCTACTCCGACCTACTGCGAATTAATCTTTCAGCTTGCGCATTACCAGCGTGGCGTTGGTGCCGCCGAAGCCGAAGC  >  NC_000913/2440247‑2440440

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.