BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3255217 =	NA (NA)	8 (0.110)	6/164	NT	NA	noncoding (1/103 nt)	REP236 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP236 (repetitive extragenic palindromic) element; contains 2 REP sequences
*	?	NC_000913	3255247 =	NA (NA)	8 (0.110)	6/164	NT	NA	noncoding (31/103 nt)	REP236 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP236 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 103 total aligned reads displayed.

CTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATC  >  NC_000913/3255148‑3255345

  ggAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTa                                                                                                  >  2:2140934/1‑100 (MQ=255)

       cTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACaaaa                                                                                             >  1:114989/1‑100 (MQ=255)

       cTATCGTCGCGGATGCTGAAACGCCTTTAGCCGAGGATGAAGCTACCGCGTAAAGACATGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACaaaa                                                                                             <  1:725871/100‑1 (MQ=255)

        tATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAAt                                                                                            >  2:1945420/1‑100 (MQ=255)

        gctggcgcatcttgtccggcctacgggttgtttaattcgttaatgttgttggattttgtagGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAAt                                                                                            >  1:1151012‑M1/62‑100 (MQ=255)

         aTCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATc                                                                                           <  1:1968240/100‑1 (MQ=255)

         aTCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATc                                                                                           >  2:592892/1‑100 (MQ=255)

           cgtcgCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCca                                                                                         >  1:1857340/1‑100 (MQ=255)

           cgtcgCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCca                                                                                         >  1:763844/1‑100 (MQ=255)

           cgtcgCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCca                                                                                         <  1:1422989/100‑1 (MQ=255)

            gtcgCGGTTGCAGAAACGCGTTTAGCCGAGAATGAAGCTACCGCGTAAAGACAGGTTACCGCATGAGGCGAAAACGCCTTATCAACCCTACa                                                                                                >  2:1172851/1‑92 (MQ=255)

            gtcgCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCcaa                                                                                        >  1:902341/1‑100 (MQ=255)

            gtcgCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCcaa                                                                                        >  1:1564063/1‑100 (MQ=255)

             tcttccgatcTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCcaac                                                                                       <  1:1208933/91‑1 (MQ=255)

             tcgCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAATACAGGTTGACTGATGCGGCGAAAACGCCTTATCAGGCCTACAAAATCcaac                                                                                       <  2:1098362/100‑1 (MQ=38)

             tcgCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCcaac                                                                                       <  1:1302387/100‑1 (MQ=255)

                     gCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTaa                                                                               <  2:197819/100‑1 (MQ=255)

                      cTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAAc                                                                              >  2:1601946/1‑100 (MQ=255)

                      cTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAAc                                                                              >  1:1529196/1‑100 (MQ=255)

                      cTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAAc                                                                              >  2:1517438/1‑100 (MQ=255)

                      cTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAAc                                                                              >  2:208621/1‑100 (MQ=255)

                       tGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACg                                                                             <  2:1338033/100‑1 (MQ=255)

                        gAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCcaacagatcggaaga                                                                            >  2:1208929/1‑90 (MQ=255)

                          aaCGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGaa                                                                           >  1:1037145/1‑99 (MQ=255)

                          aaCGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACACCTTATCCGGCCTACAAAATCAAACAACATTAACGAAt                                                                          >  2:595529/1‑100 (MQ=255)

                            cgcgTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTa                                                                        <  2:500129/100‑1 (MQ=255)

                            cgcgTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTa                                                                        >  1:696844/1‑100 (MQ=255)

                              ngTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTaaa                                                                      >  2:1913554/2‑100 (MQ=255)

                              cgTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTaaa                                                                      >  2:2095904/1‑100 (MQ=255)

                               gTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAaac                                                                     <  2:8994/100‑1 (MQ=255)

                                  tAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAaacaac                                                                  <  2:302873/100‑1 (MQ=255)

                                  tAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAaacaac                                                                  >  2:1791977/1‑100 (MQ=255)

                                    tccgatcttGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAAccc                                                                <  2:857487/92‑1 (MQ=255)

                                    gCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAAccc                                                                >  1:1615371/1‑100 (MQ=255)

                                    gCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAAccc                                                                >  2:2198864/1‑100 (MQ=255)

                                    gCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAAccc                                                                >  1:407730/1‑100 (MQ=255)

                                     ccGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTCAACAACCCg                                                               >  2:1990464/1‑100 (MQ=255)

                                      cGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGTATGCGGCGAAAACGCCTTTTCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCg                                                               <  2:697882/99‑1 (MQ=255)

                                      cGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGt                                                              <  1:1128458/100‑1 (MQ=255)

                                      cGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGt                                                              >  2:912938/1‑100 (MQ=255)

                                      cGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGt                                                              >  1:964515/1‑100 (MQ=255)

                                       gAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTa                                                             <  1:1084231/100‑1 (MQ=255)

                                        aGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAg                                                            <  1:1294467/100‑1 (MQ=255)

                                         ggATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAgg                                                           >  2:467769/1‑100 (MQ=255)

                                         ggATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAgg                                                           >  2:350150/1‑100 (MQ=255)

                                            tGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAAcccagatcgga                                                        >  1:857487/1‑92 (MQ=255)

                                            tGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCg                                                        >  1:765289/1‑100 (MQ=255)

                                               aGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGAc                                                     <  1:2065643/100‑1 (MQ=255)

                                                  tACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAg                                                  >  1:274322/1‑100 (MQ=255)

                                                   aCCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAGCAACATTAACGAATTAAACAACCCGTAGGCCGGACAAg                                                  <  1:1704036/99‑1 (MQ=255)

                                                   aCCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGa                                                 <  1:1945433/100‑1 (MQ=255)

                                                    ccGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGAt                                                >  1:504841/1‑100 (MQ=255)

                                                     cgcgTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATg                                               >  1:1339793/1‑100 (MQ=255)

                                                     cgcgTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATg                                               >  1:1599771/1‑100 (MQ=255)

                                                     cgcgTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATg                                               <  1:816745/100‑1 (MQ=255)

                                                      gcgTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATgc                                              >  1:40127/1‑100 (MQ=255)

                                                      gcgTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATgc                                              >  1:1138323/1‑100 (MQ=255)

                                                      gcgTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCATAGGCCGGACAAGATgc                                              >  1:1084179/1‑100 (MQ=255)

                                                           aaGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAg                                         <  1:350149/100‑1 (MQ=255)

                                                            attttgtaggccggataaggcgttttcgccgcatccggcCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAgc                                        >  1:1151012‑M2/40‑100 (MQ=255)

                                                                aGGTTGCCGGATGCGGCGAAATCGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAgcatcg                                    <  1:1287268/100‑1 (MQ=255)

                                                                aGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAgcatcg                                    <  2:2087028/100‑1 (MQ=255)

                                                                 ggTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAgcatcgc                                   >  2:2075803/1‑100 (MQ=255)

                                                                  gTTGCCGGATGGGGCGAAAACGCCTTATTCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAgcatcgca                                  <  1:91802/100‑1 (MQ=255)

                                                                  gTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAgcatcgca                                  >  2:38858/1‑100 (MQ=255)

                                                                  gTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAgcatcgca                                  <  1:1926218/100‑1 (MQ=255)

                                                                    tGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAgcatcgcatc                                >  1:499328/1‑100 (MQ=255)

                                                                     gccggataaggcgttttcgccgcatccggcCTACAAAATCCAACAACATTAACGAATTCAACAACCCGTAGCCCGGACAAGATGCGCCAGcatcccatcc                               >  2:494492‑M2/31‑100 (MQ=255)

                                                                     GCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATcc                               <  2:118785‑M1/100‑1 (MQ=255)

                                                                     GCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATcc                               <  2:1881617‑M1/100‑1 (MQ=255)

                                                                     GCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATcc                               <  2:193776‑M1/100‑1 (MQ=255)

                                                                     GCCGGATGCGGCGAAAACGCCTTATCCGGCATACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATcc                               <  2:13497‑M1/100‑1 (MQ=255)

                                                                      ccggataaggcgttttcgccgcatccggcCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCg                              >  2:608175‑M2/30‑100 (MQ=255)

                                                                      ccggataaggcgttttcgccgcatccggcCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCg                              >  1:237062‑M2/30‑100 (MQ=255)

                                                                      CCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGCTGCGCCAGCATCGCATCCg                              <  2:1656959‑M1/100‑1 (MQ=255)

                                                                      CCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAgcatcgcat                                 <  1:30066‑M1/97‑1 (MQ=255)

                                                                      CCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCg                              <  1:2153635‑M1/100‑1 (MQ=255)

                                                                       CGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCgg                             <  1:821458‑M1/100‑1 (MQ=255)

                                                                        ggataaggcgttttcgccgcatccggcCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGc                            >  2:1937495‑M2/28‑100 (MQ=255)

                                                                        ggataaggcgttttcgccgcatccggcCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGc                            >  2:196888‑M2/28‑100 (MQ=255)

                                                                            gcggcgAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGa                        >  1:1779688/1‑100 (MQ=255)

                                                                            aaggcgttttcgccgcatccggcCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGa                        >  1:1497237‑M2/24‑100 (MQ=255)

                                                                             cggcgAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGa                        >  2:875368/1‑99 (MQ=255)

                                                                               gcgAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATcc                     >  1:782753/1‑100 (MQ=255)

                                                                               gagAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATcc                     <  1:143345/98‑1 (MQ=255)

                                                                                cgAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATccc                    <  2:264362/100‑1 (MQ=255)

                                                                                cgAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATccc                    <  1:581506/100‑1 (MQ=255)

                                                                                cgAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATccc                    <  2:510357/100‑1 (MQ=255)

                                                                                 gttttcgccgcatccggcCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATcccc                   >  1:1952797‑M2/19‑100 (MQ=255)

                                                                                 gAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATcccc                   <  1:948775/100‑1 (MQ=255)

                                                                                 gAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATcccc                   >  2:2213608/1‑100 (MQ=255)

                                                                                  aaaaCGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCa                  <  1:307441/100‑1 (MQ=255)

                                                                                   aaaCGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCaa                 <  1:1263654/100‑1 (MQ=255)

                                                                                    aaCGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCaaa                >  1:1874330/1‑100 (MQ=255)

                                                                                      cGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCACCGCATCCGGCACGATCCCCAAAAc              >  1:816841/1‑100 (MQ=255)

                                                                                        ccTTATCCGGCCTACAAAATACAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCt            >  2:1369835/1‑100 (MQ=255)

                                                                                         cTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTg           >  1:1896321/1‑100 (MQ=255)

                                                                                          ttATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTgg          <  1:429792/100‑1 (MQ=255)

                                                                                             tccggcCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGt       <  2:1689205‑M2/94‑1 (MQ=255)

                                                                                                  cCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATc  <  1:1369841‑M2/99‑1 (MQ=255)

CTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATC  >  NC_000913/3255148‑3255345

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.