New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 337984060 (0.740)11 (0.140) 6/168 NT 15.6% coding (158/1128 nt) zapE divisome ATPase
?NC_000913 = 3379865 62 (0.810)coding (133/1128 nt) zapE divisome ATPase

CATATATAAGCCACGCACTGGCGTATGCTTTGTGTCTTCGCGTTTACCCCACAGCTTACCGACCCGCGCCATTAGCCCACTCGTCCTGGGGGCTGGTGGCGTGCTATTGATGAGTTCCTGATAAATAATTTCCAGGCGGCTGACGGCCTCTTTTTGAACGTCGTCGGGTTGATGGCTGCCTTCATTAAG  >  NC_000913/3379770‑3379958
                                                                                               |                                                                                             
caTATATAAGCCACGCACTGGCGTATGCTTTGTGTCTTCGCGTTTACCCCACAGCTTACCGACCCGCGCCATTAGCCCACTCGTCCTGGAGGCAGGtggc                                                                                           <  1:64857‑M2/100‑5 (MQ=255)
  tatataATCCACGCACTGGCGTATGCTTTGTGTCTTCGCGTTTACCCCACAGCTTACCGACCCGCGCCATTAGCCCACTCGTCCTGGGGGCTGGtggcg                                                                                          >  1:60424‑M2/1‑94 (MQ=255)
   atataAGCCACGCACTGGCGTATGCTTTGTGTCTTCGCGTTTACCCCACAGCTTACCGACCCGCGCCATTAGCCCACTCGTCCTGGGGGCTGGTGGCGTg                                                                                        <  2:385094/100‑1 (MQ=255)
   atataAGCCACGCACTGGCGTATGCTTTGTGTCTTCGCGTTTACCCCACAGCTTACCGACCCGCGCCATTAGCCCACTCGTCCTGGGGGCTGGTGGCGTg                                                                                        >  2:2233973/1‑100 (MQ=255)
    tataAGCCACGCACTGGCGTATGCTTTGTGTCTTCGCGTTTACCCCACAGCTTACCGACCCGCGCCATTAGCCCACTCGTCCTGGGGGCTGGTGGCGTGc                                                                                       <  1:1748117/100‑1 (MQ=255)
    tataAGCCACGCACTGGCGTATGCTTTGTGTCTTCGCGTTTACCCCACAGCTTACCGACCCGCGCCATTAGCCCACTCGTCCTGGGGGCTGGTGGCGTGc                                                                                       <  2:628522/100‑1 (MQ=255)
     ataAGCCACGCACTGGCGTATGCTTTGTGTCTTCGCGTTTACCCCACAGCTTACCGACCCGCGCCATTAGCCCACTCGTCCTGGGGGCTGGTGGCGTGCt                                                                                      >  2:217103/1‑100 (MQ=255)
      taAGCCACGCACTGGCGTATGCTTTGTGTCTTCGCGTTTACCCCACAGCTTACCGACCCGCGCCATTAGCCCACTCGTCCTGGGGGCTGGTGGCGTGCTa                                                                                     >  1:1128590/1‑100 (MQ=255)
           cACGCACTTGCGTATGCTTTTTGTCTTCGCGTTTACCCCACAGCTTACCGTCCCGCTTCATTAGCCCACTCGTCCTGTTGGCTGGTGGCGTGCTATtgat                                                                                <  2:115054/100‑1 (MQ=255)
            aCGCACTGGCGTATGCTTTGTGTCTTCGCGTTTACCCCACAGCTTACCGACCCGCGCCATTAGCCCACTCGTCCTGGGGTCTGGTGGCGTGCTATtgatg                                                                               <  2:1367901/100‑1 (MQ=255)
             cGCACTGGCGTATGCTTTGTGTCTTCGCGTTTACCCCACAGCTTACCGACCCGCGCCATTAGCCCACTCGTCCTGGTGGCTGGTGGCGTGCTATtgatga                                                                              >  1:687581/1‑100 (MQ=255)
             cGCACTGGCGTATGCTTTGTGTCTTCGCGTTTACCCCACAGCTTACCGACCCGCGCCATTAGCCCACTCGTCCTGGGGGCTGGTGGCGTGCTATtgatga                                                                              >  2:634883/1‑100 (MQ=255)
               cACTGGCGTATGCTTTGTGTCTTCGCGTTTACCCCACAGCTTACCGACCCGCGCCATTAGCCCACTCGTCCTGGGGGCTGGTGGCGTGCTATTGATGAGt                                                                            >  1:1588347/1‑100 (MQ=255)
                aCTGGCGTATGCTTTGTGTCTTCGCGTTTACCCCACAGCTTACCGACCCGCGCCATTAGCCCACTCGTCCTGGGGGCTGGTGGCGTGCTATTGATGAGtt                                                                           >  2:2050339/1‑100 (MQ=255)
                    gCGTATGCTTTGTGTCTTCGCGTTTACCCCACAGCTTACCGACCCGCGCCATTAGCCCACTCGTCCTGGGGGCTGGTGGCGTGCTATTGATGAGTTCCTg                                                                       <  2:1009324/100‑1 (MQ=255)
                     cGTATGCTTTGTGTCTTCGCGTTTACCCCACAGCTTACCGACCCGCGCCATTAGCCCACTCGTCCTGGGGGCTGGTGGCGTGCTATTGATGAGTTCCTGa                                                                      >  1:2182421/1‑100 (MQ=255)
                      gTATGCTTTTTGTCTTCGCGTTTACCCCACAGCTTACCGACCCGCGCCATTAGCCCACTCGTCCTGGGGGCTGGTGGCGTGCTATTGATGAGTTCCTGa                                                                      >  2:1034294/1‑99 (MQ=255)
                       tATGCTTTGTGTCTTCGCGTTTACCCCACAGCTTACTGACCCGCGCCATTAGCCCACTCGTCCTGGGGGCTGGTGGCGTGCTATTGATGAGTTCCTGata                                                                    <  1:2139346/100‑1 (MQ=255)
                       tATGCTTTGTGTCTTCGCGTTTACCCCACAGCTTACCGACCCGCGCCATTAGCCCACTCGTCCTGGGGGCTGGTGGCGTGCTATTGATGAGTTCCTGata                                                                    <  2:2221368/100‑1 (MQ=255)
                        aTGCTTTGTGTCTTCGCGTTTACCCCACAGCTTACCGACCCGCGCCATTAGCCCACTCGTCCTGGGGGCTGGTGGCGTGCTATTGATGAGTTCCTGataa                                                                   >  2:794814/1‑100 (MQ=255)
                          gCTTTGTGTCTTCGCGTTTACCCCACAGCTTACCGACCCGCGCCATTAGCCCACTCGTCCTGGGGGCTGGTGGCGTGCTATTGATGAGTTCCTGataaat                                                                 <  1:1452404/100‑1 (MQ=255)
                          gCTTTGTGTCTTCGCGTTTACCCCACAGCTTACCGACCCGCGCCATTAGCCCACTCGTCCTGGGGGCTGGTGGCGTGCTATTGATGAGTACCTGataaat                                                                 >  2:1478080/1‑100 (MQ=255)
                           ctgtgtgTCTTCGCGTTTACCCCACAGCTTACCGACCCGCGCCATTAGCCCACTCGTCCTGGGGGCTGGTGGCGTGCTATTGATGAGTTCCTGataaata                                                                >  2:1790160/4‑100 (MQ=255)
                           cTTTGTGTCTTCGCGTTTACCCCACAGCTTACCGACCCGCGCCATTAGCCCACTCGTCCTGGGGGCTGGTGGCGTGCTATTGATGAGTTCCTGataaata                                                                >  2:303844/1‑100 (MQ=255)
                           cTTTGTGTCTTCGCGTTTACCCCACAGCTTACCGACCCGCGCCATTAGCCCACTCGTCCTGGGGGCTGGTGGCGTGCTATTGATGAGTTCCTGataaata                                                                <  2:939467/100‑1 (MQ=255)
                            tttGTGTCTTCGCGTTTACCCCACAGCTTACCGAACCGCGCCATTAGCCCAGTCGTCCTGGTAGCTGGTGGCGTGCTATTGATGAGTTCCTGataaataa                                                               <  2:1152575/100‑1 (MQ=255)
                                 gtCTTCGCGTTTACCCCACAGCTTACCGACCCGCGCCATTATCCCACTCGTCCTTGGGGCTGGTTGCGTGCTATTGATGAGTTCCTGATAAATAATTTcc                                                          <  2:521294/100‑1 (MQ=255)
                                  tCTTCGCGTTTACCCCACAGCTTACCGACCCGCGCCATTAGCCCACTCGTCCTGGGGGCTGGTGGCGTGCTATTGATGAGTTCCTGATAAATAATTTCCa                                                         <  1:1929879/100‑1 (MQ=255)
                                    ttCGCGTTTACCCCACAGCTTACCGACCCGCGCCATTAGCCCACTCGTCCTGGGGGCTGGTGGCGTGCTATTGATGAGTTCCTGATAAATAATTTCCAgg                                                       <  1:1802596/100‑1 (MQ=255)
                                     tCGCGTTTACCCCACAGCTTACCGACCCGCGCCATTAGCCCACTCGTCCTGGGGGCTGGTGGCGTGCTATTGATGAGTTCCTGATAAATAATTTCCAggc                                                      >  2:61430/1‑100 (MQ=255)
                                     tCGCGTTTACCCCACAGCTTACCGACCCGCGCCATTAGCCCACTCGTCCTGGGGGCTGGTGGCGTGCTATTGATGAGTTCCTGATAAATAATTTCCAggc                                                      >  2:1916407/1‑100 (MQ=255)
                                        cgTTTACCCCACAGCTTACCGACCCGCGCCATTAGCCCACTCGTCCTGGGGGCTGGTGGCGTGCTATTGATGAGTTCCTGATAAATAATTTCCAggcggc                                                   <  2:1946715/100‑1 (MQ=255)
                                         gTTTACCCCACAGCTTACCGACCCGCGCCATTAGCCCACTCGTCCTGGGGGCTGGTGGCGTGCTATTGATGAGTTCCTGATAAATAATTTCCAGGCGGCt                                                  <  2:939421/100‑1 (MQ=255)
                                              ccccACAGCTTACCGACCCGCGCCATTAGCCCACTCGTCCTGGGGGCTGGTGGCGTGCTATTGATGAGTTCCTGATAAATAATTTCCAGGCGGCTGACgg                                             >  2:864130/1‑100 (MQ=255)
                                              ccccACAGCTTACCGACCCGCGCCATTAGCCCACTCGTCCTGGGGGCTGGTGGCGTGCTATTGATGAGTTCCTGATAAATAATTTCCAGGCGGCTGACgg                                             <  2:1275145/100‑1 (MQ=255)
                                                ccACAGCTTACCGACCCGCGCCATTAGCCCACTCGTCCTGGGGGCTGGTGGCGTGCTATTGATGAGTTCCTGATAAATAATTTCCAGGCGGCTGACGGcc                                           >  1:14542/1‑100 (MQ=255)
                                                ccACAGCTTACCGACCCGCGCCATTAGCCCACTCGTCCTGGGGGCTGGTGGCGTGCTATTGATGAGTTCCTGATAAATAATTTCCAGGCGGCTGACGGcc                                           <  2:813916/100‑1 (MQ=255)
                                                  acaGCTTACCGACCCGCGCCATTAGCCCACTCGTCCTGGGGGCTGGTGGCGTGCTATTGATGAGTTCCTGATAAATAATTTCCAGGCGGCTGACGGCctc                                         <  1:29836/100‑1 (MQ=255)
                                                     gCTTACCGACCCGCGCCATTAGCCCACTCGTCCTGGGGGCTGGTGGCGTGCTATTGATGAGTTCCTGATAAATAATTTCCAGGCGGCTGACGGCCTCttt                                      <  2:1516030/100‑1 (MQ=255)
                                                      cTTACCGACCCGCGCCATTAGCCCACTCGTCCTGGGGGCTGGTGGCGTGCTATTGATGAGTTCCTGATAAATAATTTCCAGGCGGCTGACGGCCTCtttt                                     <  1:1998612/100‑1 (MQ=255)
                                                      cTTACCGACCCGCGCCATTAGCCCACTCGTCCTGGGGGCTGGTGGCGTGCTATTGATGAGTTCCTGATAAATAATTTCCAGGCGGCTGACGGCCTCtttt                                     <  2:1338465/100‑1 (MQ=255)
                                                      cTTACCGACCCGCGCCATTAGCCCACTCGTCCTGGGGGCCGGCGGCGTGCTATGGATGAGTTCCTGATAAATAATTTCCATGCGGCTGACGGCCTCtttt                                     <  2:1578055/100‑1 (MQ=255)
                                                         aCCGACCCGCGCCATTAGCCCACTCGTCCTGGGGGCTGGTGGCGTGCTATTGATGAGTTCCTGATAAATAATTTCCAGGCGGCTGACGGCCTCTTTTTGa                                  <  1:1504846/100‑1 (MQ=255)
                                                         aCCGACCCGCGCCATTAGCCCACTCGTCCTGGGGGCTGGTGGCGTGCTATTGATGAGTTCCTGATAAATAATTTCCAGGCGGCTGACGGCCTCTTTTTGa                                  <  1:1689972/100‑1 (MQ=255)
                                                          ccGACCCGCGCCATTAGCCCACTCGTCCTGGGGGCTGGtggcgcgggtcggtaagctgtggggtaaacgcgacgacacaaagcatacgccagtgcgtggc                                 <  1:1416361‑M2/100‑63 (MQ=255)
                                                          ccGACCCGCGCCATTAGCCCACTCGTCCTGGGGGCTGGtggcgcgggtcggtaagctgtggggtaaacgcgaagacacaaagcatacgccagtgcgtgg                                  <  1:112287‑M2/99‑62 (MQ=255)
                                                          ccGACCCGCGCCATTAGCCCACTCGTCCTGGGGGCTGGTGGCGTGCTATTGATGAGTTCCTGATAAATAATTTCCAGGCGGCTGACGGCCTCTTTTTGaa                                 >  2:698290/1‑100 (MQ=255)
                                                          ccGACCCGCGCCATTAGCCCACTCGCCCTGCGGCCTGGTGGCGCGCTATTGATGAGTTCCTGCTAAATAGTTTACACGCGGCAGACGGCCTCTTTTTGa                                  >  2:1882214/1‑99 (MQ=255)
                                                          ccGACCCGCGCCATTAACCCACTCGTCCTGGGGGCTGGTGGCGTGCTATTGATGAGTTCCTGATAAATAATTTCCAGGCGGCTGACGGCCTCTTTTTGaa                                 >  2:1007294/1‑100 (MQ=255)
                                                              cccGCGCCATTAGCCCACTCGTCCTGGGGGCTGGtggcgcgggtcggtaagctgtggggtaaacgcgaagacacaaagcatacgccagtgcgtggcttat                             <  1:382357‑M2/100‑67 (MQ=255)
                                                              cccGCGCCATTAGCCCACTCGTCCTGGGGGCTGGtggcgcgggtcggtaagctgtggggtaaacgcgaagacacaaagcatacgccagtgcgtggcttat                             <  1:2031171‑M2/100‑67 (MQ=255)
                                                               ccGCGCCATTAGCCCACTCGTCCTGGGGGCTGGtggcgcgggtcggtaagctgtggggtaaacgcgaagacacaaagcatacgccagtgcgtggcttata                            <  2:880329‑M2/100‑68 (MQ=255)
                                                               ccGCGCCATTAGCCCACTCGTCCTGGGGGCTGGtggcgcgggtcggtaagctgtggggtaaacgcgaagacacaaagcatacgccagtgcgtggctta                              <  1:2038430‑M2/98‑66 (MQ=255)
                                                                cgcgCCATTAGCCCACTCGTCCTGGGGGCTGGTGGCGTGCTATTGATGAGTTCCTGATAAATAATTTCCAGGCGGCTGACGGCCTCTTTTTGAAcgtcg                            >  1:219854/1‑99 (MQ=255)
                                                                 gcgcCATTAGCCCACTCGTCCTGGGGGCTGGtggcgcgggtcggtaagctgtggggtaaacgcgaagacacaaagcatacgccagtgcgtggcttatata                          <  1:1747372‑M2/100‑70 (MQ=255)
                                                                 gcgcCATTAGCCCACTCGTCCTGGGGGCTGGtggcgcgggtcggtaagctgtggggtaaacgcgaagacacaaagcatacgccagtgcgtggcttatat                           <  1:886495‑M2/99‑69 (MQ=255)
                                                                  cgcCATTAGCCCACTCGTCCTGGGGGCTGGtggcgcgggtcggtaagctgtggggtaaacgcgaagacacaaagcatacgccagtgcgtggcttatatat                         <  2:970150‑M2/100‑71 (MQ=255)
                                                                   gcCATTAGCCCACTCGTCCTGGGGGCTGGtggcgcgggtcggtaagctgtggggtaaacgcgaagacacaaagcatacgccagtgcgtggcttatatatg                        <  1:872685‑M2/100‑72 (MQ=255)
                                                                   gcCATTAGCCCACTCGTCCTGGGGGCTGGtggcgcgggtcggtaagctgtggggtaaacgcgaagacacaaagcatacgccagtgcgtggcttatata                          <  1:809859‑M2/98‑70 (MQ=255)
                                                                   gcCATTAGCCCACTCGTCCTGGGGGCTGGTGGCGTGCTATTGATGAGTTCCTGATAAATAATTTCCAGGCGGCTGACGGCCTCTTTTTGAACGTCGTCgg                        <  2:1842512/100‑1 (MQ=255)
                                                                    ccATTAGCCCACTCGTCCTGGGGGCTGGTGGCGTGCTATTGATGAGTTCCTGATAAATAATTTCCAGGCGGCTGACGGCCTCTTTTTGAACGTCGTCggg                       >  2:652841/1‑100 (MQ=255)
                                                                     cgttAGCCCACTCGTCCTGGGGGCAGGTGTCGTGCTATTGATGAGTTCCTGATAAATAATTTCCAGGCGGCTGACGGCCTCTTTTTGAACGTAGTCGGGt                      >  2:686672/3‑100 (MQ=255)
                                                                          gCCCACTCGTCCTGGGGGCTGGTGGCGTGCTATTGATGAGTTCCTGATAAATAATTTCCAGGCGGCTGACGGCCTCTTTTTGAACGTCGTCGGGTTGATg                 >  2:119767/1‑100 (MQ=255)
                                                                          gCCCACTCGTCCTGGGGGCTGGTGGCGTGCTATTGATGAGTTCCTGATAAATAATTTCCAGGCGGCTGACGGCCTCTTTTTGAACGTCGTCGGGTTGATg                 >  2:601199/1‑100 (MQ=255)
                                                                          gCCCACTCGTCCTGGGGGCTGGTGGCGTGCTATTGATGAGTTCCTGATAAATAATTTCCAGGCGGCTGACGGCCTCTTTTTGAACGTCGTCGGGGTGATg                 >  2:1522176/1‑100 (MQ=255)
                                                                          gCCCACTCGTCCAGGGGGCTGGTGGCGTGCTATTGATGAGTTCCTGATAAATAATTTCCAGGCGGCTGACGGCCTCTTTTTGAACGTCGTCGGGTTGATg                 >  1:84856/1‑100 (MQ=255)
                                                                           cccACTCGTCCTGGGGGCTGGTGGCGTGCTATTGATGAGTTCCTGATAAATAATTTCCAGGCGGCTGACGGCCTCTTTTTGAACGTCGTCGGGTTGATgg                <  1:195023/100‑1 (MQ=255)
                                                                           cccACTCGTCCTGGGGGCTGGTGGCGTGCTATTGATGAGTTCCTGATAAATAATTTCCAGGCGGCTGACGGCCTCTTTTTGAACGTCGTCGGGTTGATgg                >  1:420567/1‑100 (MQ=255)
                                                                            ccACTCTTCCTGGGGGCTGGTGGCGTGCTATTGATGAGTTCCTGATAAATAATTTCCAGGCGGCTGACGGCCTCTTTTTTAACGTCGTCGGGTTGATGGc               <  2:1372011/100‑1 (MQ=255)
                                                                               cTCGTCCTGGGGGCTGGTGGCGTGCTATTGATGAGTTCCTGATAAATAATTTCCAGGCGGCTGACGGCCTCTTTTTGAACGTCGTCGGGTTGATGGCTg             >  2:1391556/1‑99 (MQ=255)
                                                                                 cGTCCTGGGGGCTGGTGGCGTGCTATTGATGAGTTCCTGATAAATAATTTCCAGGCGGCTGACGGCCTCTTTTTGAACGTCGTCGGGTTGATGGCTGcc           >  1:117595/1‑99 (MQ=255)
                                                                                  gTCCTGGGGGCTGGTGGCGTGCTATTGATGAGTTCCTGATAAATAATTTCCAGGCGGCTGACGGCCTCTTTTTGAACGTCGTCGGGTTGATGGCTGCCtt         <  1:1651766/100‑1 (MQ=255)
                                                                                   tCCTGGGGGCTGGTGGCGTGCTATTGATGAGTTCCTGATAAATAATTTCCAGGCGGCTGACGGCCTCTTTTTGAACGTCGTCGGGTTGATGGCTGCCTTc        <  1:1157994/100‑1 (MQ=255)
                                                                                    ccTGGGGGCTGGTGGCGTGCTATTGATGAGTTCCTGATAAATAATTTCCAGGCGGCTGACGGCCTCTTTTTGAACGTCGTCGGGTTGATGGCTGCCTTCa       <  1:1185144/100‑1 (MQ=255)
                                                                                    ccTGGGGGCTGGTGGCGTGCTATTGATGAGTTCCTGATAAATAATTTCCAGGCGGCTGACGGCCTCTTTTTGAACGTCGTCGGGTTGATGGCTGCCTTCa       <  1:647416/100‑1 (MQ=255)
                                                                                     cTGGGGGCTGGTGGCGTGCTATTGATGAGTTCCTGATTAATAATTTCCAGGCGGCTGACGGCCTCTTTTTGAAAGTCGTCGGGTTGATGGCTGCCTTCAt      >  2:1196945/1‑100 (MQ=255)
                                                                                       gggggCTGGTGGCGTGCTATTGATGAGTTCCTGATAAATAATTTCCAGGCGGCTGACGGCCTCTTTTTGAACGTCGTCGGGTTGATGGCTGCCTTCATTa    >  1:1201687/1‑100 (MQ=255)
                                                                                         gggCTGGTGGCGTGCTATTGATGAGTTCCTGATAAATAATTTCCAGGCGGCTGACGGCCTCTTTTTGAACTTCGTCGGGTTGATGGCTGCCTTCATTaa   >  2:1349501/1‑99 (MQ=255)
                                                                                         gggCTGGTGGCGTGCTATTGATGAGTTCCTGATAAATAATTTCCAGGCGGCTGACGGCCTCTTTTTGAACGTCGTCGGGTTGATGGCTGCCTTCATTaa   >  1:2034475/1‑99 (MQ=255)
                                                                                         gggCTGGTGGCGTGCTATTGATGAGTTCCTGATAAATAATTTCCAGGCGGCTGACGGCCTCTTTTTGAACGTCGTCGGGTTGATGGCTGCCTTCATTAAg  <  1:129476/100‑1 (MQ=255)
                                                                                         gggCTGGTGGCGTGCTATTGATGAGTTCCTGATAAATAATTTCCAGGCGGCTGACGGCCTCTTTTTGAACGTCGTCGGGTTGATGGCTGCCTTCATTAAg  >  1:2006768/1‑100 (MQ=255)
                                                                                               |                                                                                             
CATATATAAGCCACGCACTGGCGTATGCTTTGTGTCTTCGCGTTTACCCCACAGCTTACCGACCCGCGCCATTAGCCCACTCGTCCTGGGGGCTGGTGGCGTGCTATTGATGAGTTCCTGATAAATAATTTCCAGGCGGCTGACGGCCTCTTTTTGAACGTCGTCGGGTTGATGGCTGCCTTCATTAAG  >  NC_000913/3379770‑3379958

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.