New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 3525557NA (NA)4 (0.050) 5/164 NT NA noncoding (80/98 nt) RIP251 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP251 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
?NC_000913 = 3525568 NA (NA)noncoding (91/98 nt) RIP251 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP251 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site

Only 100 of 105 total aligned reads displayed.

CTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTGCGCGCTTCATTGAAGTCAGGG  >  NC_000913/3525469‑3525667
                                                                                                   |                                                                                                   
cTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGc                                                                                                     <  1:534244/100‑1 (MQ=255)
  tGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCat                                                                                                   <  2:525167‑M2/100‑3 (MQ=255)
     ttATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCatcag                                                                                                <  2:1596321‑M2/100‑6 (MQ=255)
     ttATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCatca                                                                                                 >  2:1993063‑M2/1‑95 (MQ=255)
       aTGCCGGCTACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAGACCCCATAAGCCTGATAAACATTGTGCatcaggc                                                                                              <  2:1177507‑M2/100‑8 (MQ=255)
       aTGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCatcaggc                                                                                              >  2:1163754‑M2/1‑93 (MQ=255)
       aTGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCatcaggc                                                                                              <  2:2002175‑M2/100‑8 (MQ=255)
        tGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCa                                                                                             >  1:748405/1‑100 (MQ=255)
        tGCCGGATACGGCGTGAAAACGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGACTGATAAACATTGTACATCAGGCa                                                                                             >  2:845517/1‑100 (MQ=38)
         gCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCaa                                                                                            >  2:1315990/1‑100 (MQ=255)
         gCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCaa                                                                                            >  2:1316007/1‑100 (MQ=255)
         gCCGGATAACGCGTTCACGCCGTATCCGGCTAACACAATCGTGCAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTATGCATCAGGCaa                                                                                            >  1:151255/1‑100 (MQ=25)
          ccGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATGCACAATGTTTatcaggctta                                                                                           >  2:1919228‑M2/1‑90 (MQ=255)
          ccGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCa                                                                                             >  1:1897142/1‑98 (MQ=255)
           cGGATACGGCGTGAGCGCTTAATCCGGCTAACAAGATCGTGAAAACTCAATACGTTGCAGAATCCTCATGAGTCTGATAAACATTGTGCGTCAGGCAAAc                                                                                          <  2:1861352/100‑1 (MQ=255)
            ggATACGGCGTTAACTAGTTATCCGGCTAACAAAATCGTGATAACTCAATAAATTGCAGAAACCCCATAAGCCTGTTAATCATTGTGCATCAGGCaaa                                                                                           <  2:657563/98‑1 (MQ=255)
              aTACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATGCACAATGTTTatcaggcttatggg                                                                                       >  1:1857960‑M2/1‑86 (MQ=255)
              aTACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATGCACAATGTTTatcaggcttatgg                                                                                        >  1:438881‑M2/1‑86 (MQ=255)
               tACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCa                                                                                      >  2:299174/1‑100 (MQ=255)
               tACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCa                                                                                      >  2:109942/1‑100 (MQ=255)
                aCGGCGTGAACGGGTTATCCGGCTAACAAAATCGTGAAAGCTCAATAAAGTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCAc                                                                                     <  1:1482814/100‑1 (MQ=255)
                 cGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCAca                                                                                    >  1:1671369/1‑99 (MQ=255)
                 cGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACg                                                                                    >  1:554264/1‑100 (MQ=255)
                  ggCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGc                                                                                   >  2:2068017/1‑100 (MQ=255)
                     gTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCAt                                                                                 >  1:703420/1‑99 (MQ=255)
                            cgTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACt                                                                          >  1:709622/1‑99 (MQ=255)
                            cgTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTc                                                                         <  2:748405/100‑1 (MQ=255)
                               tATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGcc                                                                      <  1:1321902/100‑1 (MQ=255)
                               tATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGcc                                                                      <  1:569466/100‑1 (MQ=255)
                                aTCCGGCTAACAAAATAGAGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAAATTCAAGCATTTACACTCGcc                                                                      >  2:751948/1‑99 (MQ=255)
                                 tCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGcccc                                                                    >  2:1399648/1‑100 (MQ=255)
                                  ccGGCTAACAAAATCGTGAAAACTCAATTAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCt                                                                   >  2:781126/1‑100 (MQ=255)
                                  ccGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCt                                                                   >  1:2035264/1‑100 (MQ=255)
                                  ccGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCt                                                                   >  2:38473/1‑100 (MQ=255)
                                    ggCTAACAAAATCGTGAAATCTCAATAAATTGCAGAAACCCCATAAGCCTGATGCACAATGTTTatcaggcttatggggtttctgcaatttattgagttt                                                                 >  1:2102525‑M2/1‑64 (MQ=255)
                                    ggCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGc                                                                 >  1:1087665/1‑100 (MQ=255)
                                        aaCAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCtt                                                             >  1:564709/1‑100 (MQ=255)
                                          cAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTc                                                           >  2:2010569/1‑100 (MQ=255)
                                          cAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTc                                                           >  1:1953049/1‑100 (MQ=255)
                                           aaaaTCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCa                                                          <  1:1714486/100‑1 (MQ=255)
                                             aaTCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAAc                                                        <  1:1677075/100‑1 (MQ=255)
                                             aaTCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAAc                                                        >  1:33298/1‑100 (MQ=255)
                                             aaTCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAAc                                                        >  1:977193/1‑100 (MQ=255)
                                              aTCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAAcc                                                       >  2:294636/1‑100 (MQ=255)
                                              aTCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAAcc                                                       <  1:181928/100‑1 (MQ=255)
                                                  tGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTc                                                   >  1:463629/1‑100 (MQ=255)
                                                   gAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCATGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTcg                                                  <  2:1245744/100‑1 (MQ=255)
                                                   gAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTcg                                                  >  2:898490/1‑100 (MQ=255)
                                                      aaCTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCgcgc                                               >  1:2054183/1‑100 (MQ=255)
                                                      aaCTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCgcgc                                               <  2:675142/100‑1 (MQ=255)
                                                      aaCTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCgcgc                                               >  2:2216553/1‑100 (MQ=255)
                                                        cTCAATAAATTGCAGAAACCCCATAAGCCTGATAACCATTGTGCATCAGGCAAACTTCACGCATTTACAATCCACTCTGCCATTTCAACCATTCTCGCAc                                             >  2:1879953/1‑100 (MQ=255)
                                                        cTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTTCCCTTTCAACCATTCGCGCAc                                             >  1:87514/1‑100 (MQ=255)
                                                        cTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCACTGCCCTTTCAACCATTCGCGCAc                                             >  2:461594/1‑100 (MQ=255)
                                                          caatcaatTGCAGAAACCCCATAACCCTGATAAACATAGTGCAAAAGACCAACTCCACGCACTTACACTCGCCACTGCCAATTCAACAATACGAGCACGa                                           >  2:174808/1‑100 (MQ=255)
                                                            aTAAATTGCCGAAACCCCATAAGCCTGATAAAAATTGTGCATCAAGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTTGCGCAagag                                          >  2:322562/1‑99 (MQ=255)
                                                            aTAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAgg                                         >  1:1052030/1‑100 (MQ=255)
                                                               aaTTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCTCTGCCCTTTCAACCATTTGCGCACGAGGatc                                      <  1:1510496/100‑3 (MQ=255)
                                                               aaTTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAAc                                      >  2:500366/1‑100 (MQ=255)
                                                               aaTTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAAc                                      >  2:1556708/1‑100 (MQ=255)
                                                                 ttGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAg                                    <  2:2170926/100‑1 (MQ=255)
                                                                    cAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAgcgc                                 >  1:948343/1‑100 (MQ=255)
                                                                    cAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAgcgc                                 >  1:587429/1‑100 (MQ=255)
                                                                      gAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCAc                               >  1:513329/1‑100 (MQ=255)
                                                                        aaCCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTg                             >  1:1556517/1‑100 (MQ=255)
                                                                         aCCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGa                            >  1:2025679/1‑100 (MQ=255)
                                                                          ccccATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACATTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGa                            <  1:299173/99‑1 (MQ=255)
                                                                          ccccATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGAc                           <  2:169968/100‑1 (MQ=255)
                                                                           cccATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACa                          >  1:1674041/1‑100 (MQ=255)
                                                                            ccATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACAt                         <  1:1879945/100‑1 (MQ=255)
                                                                             cATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACAtt                        >  1:1930337/1‑100 (MQ=255)
                                                                             cATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACAtt                        >  2:1165011/1‑100 (MQ=255)
                                                                               tAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTgc                      >  2:81515/1‑100 (MQ=255)
                                                                               tAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTg                       <  1:176605/99‑1 (MQ=255)
                                                                                  gCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTgcgcg                   >  2:329864/1‑100 (MQ=255)
                                                                                  gCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTgcgcg                   >  2:1293169/1‑100 (MQ=255)
                                                                                  gCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTgcgcg                   <  2:2097091/100‑1 (MQ=255)
                                                                                  gCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTgcgc                    >  1:1751600/1‑99 (MQ=255)
                                                                                    cTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTGCGCGCt                 <  1:965033/100‑1 (MQ=255)
                                                                                     tGATAAACATTGTGCatcaggcttatggggtttctgcaatttattgagttttcacgattttgttagccggataacgcgttcacgccgtatccggcataaa                >  1:1919241‑M2/1‑15 (MQ=255)
                                                                                        tAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTGCGCGCTTCAt             <  2:2177435/100‑1 (MQ=255)
                                                                                        tAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTGCGCGCTTCAt             >  2:1286166/1‑100 (MQ=255)
                                                                                        tAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTGCGCGCTTCAt             <  1:1961793/100‑1 (MQ=255)
                                                                                         aaaCATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTGCGCGCTTCAtt            <  1:1165015/100‑1 (MQ=255)
                                                                                          atcATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTGCGCGCTTCATTg           <  2:1357048/98‑1 (MQ=255)
                                                                                          aaCATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTGCGCGCTTCATTg           <  2:85816/100‑1 (MQ=255)
                                                                                          aaCATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTGCGCGCTTCATTg           <  2:854792/100‑1 (MQ=255)
                                                                                          aaCATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTGCGCGCTTCATTg           <  1:1534855/100‑1 (MQ=255)
                                                                                           aCATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCCGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTGCGCGCTTCATTg           <  2:1435172/99‑1 (MQ=255)
                                                                                            cATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCTTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTGCGCGCTTCAtt            <  2:1862542/97‑1 (MQ=255)
                                                                                            cATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAACGCACTGACATTGCGCGCTTCATTGaa         >  1:9139/1‑100 (MQ=255)
                                                                                             aTTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTGCGCGCTTCATTGAAg        <  1:2068031/100‑1 (MQ=255)
                                                                                              ttGTGCGTCAGGCAAACTTCTCGCAGTGACACTCGTCGCTGCCCTTTCAACCATGCGCGCACGTGGAACAGCGCACTGACATTGCGCGCTTCATTGAAg        <  2:151255/99‑1 (MQ=255)
                                                                                              ttGTGCATCAGGCAAATTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTGCGCGCTTCATTGAAg        <  1:15198/99‑1 (MQ=255)
                                                                                              ttGTGCATCAGGCAAACTTCACGCATTTACACTTGCCCCTGCCCTTTCATCCATTCGTGCACGAGGAATAGCGTATTGACATTGCGCGCTTCATTg           <  2:370167/96‑1 (MQ=255)
                                                                                                  gCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTGCGCGCTTCATTGAAGTCAgg   <  1:329863/100‑1 (MQ=255)
                                                                                                   cATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCTTTTCAACCATTCGCGCACGTGGAACAGCGCACTGACATTGCGCGCTTCATTGAAGTCAggg  <  2:1219601/100‑1 (MQ=255)
                                                                                                   cATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTGCGCGCTTCATTGAAGTCAgg   >  1:774553/1‑99 (MQ=255)
                                                                                                   cATCAGGCAAACTTCACGCATTTACACTCGCCCCCGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTGCGCGCTTCATTGAAGTCAggg  <  2:1015207/100‑1 (MQ=255)
                                                                                                   cATCAGGCAAACTTCACGCATTTACACGCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTGCGCGCTTCATTGAAGTCAggg  <  2:1837986/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
CTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCATCAGGCAAACTTCACGCATTTACACTCGCCCCTGCCCTTTCAACCATTCGCGCACGAGGAACAGCGCACTGACATTGCGCGCTTCATTGAAGTCAGGG  >  NC_000913/3525469‑3525667

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.