| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3622548 | NA (NA) | 4 (0.050) | 3/168 | NT | 21.0% | coding (3357/4236 nt) | rhsB | Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor |
| ? | NC_000913 | = 3622579 | 16 (0.200) | coding (3388/4236 nt) | rhsB | Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor | |||||
AGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGG > NC_000913/3622481‑3622678 | aGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGC < 1:725599‑M2/99‑1 (MQ=255) GGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGAccc > 2:1740931‑M2/1‑99 (MQ=255) GGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGAccc > 1:1370081‑M2/1‑99 (MQ=255) GAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCgg < 1:2242136‑M2/100‑1 (MQ=255) GAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCgg < 2:1992647‑M2/100‑1 (MQ=255) GAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCgg < 2:1986936‑M2/100‑1 (MQ=255) GAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCgg < 1:822161‑M2/100‑1 (MQ=255) AAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCgg > 2:864592‑M2/1‑99 (MQ=255) AAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGgt > 2:715544‑M2/1‑100 (MQ=255) AAAGTGAAACCCTGGCTGACCGGGTGAGGTAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGgt < 2:1349109‑M2/100‑1 (MQ=255) AAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCgg > 2:1091761‑M2/1‑98 (MQ=255) AAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGgtg < 1:1560423‑M2/100‑1 (MQ=255) AAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGgtg < 2:1723128‑M2/100‑1 (MQ=255) AAGTGAAAGCCTCGCTGACCGGGTGAGTGAGGAAAGCCGCTTCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGTAAAACCAGATGGACCCgg < 2:416979‑M2/98‑1 (MQ=255) ggctggcATCGTGCGGCCTGACGGTGGCGCAGATGCaaagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgag < 2:961206‑M2/100‑65 (MQ=255) gctggcATCGTGCGGCCTGACCGTGGAGCAGATGCcagccagcggccgctttcctccctcacccgttcagccgggatttccctttcccgccgggcg < 2:35428‑M2/96‑62 (MQ=255) ctggcATCGTGCGGCCTGACCGTGGAGCAGATGCcagccagcggcggctttcctcactcacccggtcagccaagatttcactttccagccggtcgagcat < 1:654096‑M2/100‑67 (MQ=255) gcATCGTGCGGCCTGACCGTGGAGCAGATGCcagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatct < 1:883930‑M2/99‑69 (MQ=255) cTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGgcgc < 1:1030805/100‑1 (MQ=31) tGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGgcgc < 1:1227153/99‑1 (MQ=31) tGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCt < 2:383843/100‑1 (MQ=32) ccGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCtcat > 2:1683423/1‑100 (MQ=33) ccGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCtcat > 1:1956544/1‑100 (MQ=33) gTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCtcatca < 1:387397/100‑1 (MQ=33) gTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCtcatca > 2:954008/1‑100 (MQ=33) tGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAg > 1:1509809/1‑100 (MQ=33) ggAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGc > 2:2220634/1‑100 (MQ=33) gAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCa < 2:1528207/100‑1 (MQ=33) gAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCa > 1:2117966/1‑100 (MQ=33) aGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCa < 1:1192083/99‑1 (MQ=32) cAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACgg < 2:725599/100‑1 (MQ=32) aGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACgg < 1:1107300/99‑1 (MQ=32) aGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGa > 1:605917/1‑100 (MQ=33) aGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGa > 1:1355349/1‑100 (MQ=33) gATGCcagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgggaacaccacac < 1:2130422‑M2/100‑96 (MQ=255) gATGCcagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgggaacaccacac > 1:132703‑M2/1‑5 (MQ=255) gATGCcagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgggaacaccacac < 1:2201864‑M2/100‑96 (MQ=255) gATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCCCTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGa > 1:455160/1‑99 (MQ=17) ntgCcagccagcggcggctttcctcactcacccggtaagccaggatttcactttccagccggtcgagcatctacaccagcaccggcggcaacaccacact < 1:925122‑M2/99‑97 (MQ=255) aTGTcagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgggaacacc > 1:768675‑M2/1‑4 (MQ=255) aTGCcagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgggaacaccacact > 2:1956397‑M2/1‑4 (MQ=255) aTGCcagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgggaacaccacact > 1:2099342‑M2/1‑4 (MQ=255) tGCcagccagcggcggctttcctcactcgcccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgggaacaccacactg > 2:1740597‑M2/1‑3 (MQ=255) tGCcagccagcggcggctttcctcactcacccggtgatccaggattgcactttccagccggtcgagcatctgcaccagcaccggcgggaacaccacactg > 1:1028051‑M2/1‑3 (MQ=255) tGCcagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgggaacaccacactg > 1:1027920‑M2/1‑3 (MQ=255) tGCcagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgggaacaccacactg < 1:1323727‑M2/100‑98 (MQ=255) tGCcagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgggaacaccacactg < 1:931048‑M2/100‑98 (MQ=255) tGCcagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgggaacaccacactg < 1:1567930‑M2/100‑98 (MQ=255) tGCcagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgggaacaccacactg > 1:1928217‑M2/1‑3 (MQ=255) tGCcagccagcggcggctttcctcactaacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgggaacaccacactg < 2:94073‑M2/100‑98 (MQ=255) tGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAgg > 2:698990/1‑100 (MQ=32) tGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAgg > 1:1888699/1‑100 (MQ=32) gccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgggaacaccacactgc < 2:1670930‑M2/100‑99 (MQ=255) gccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgggaacaccacactgc < 1:987219‑M2/100‑99 (MQ=255) gccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgggaacaccacactgc > 2:1821599‑M2/1‑2 (MQ=255) gccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgggaacaccacactgc > 1:1649409‑M2/1‑2 (MQ=255) gccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgggaacaccacactgc < 2:318378‑M2/100‑99 (MQ=255) gccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgggaacaccacactgc > 1:2010479‑M2/1‑2 (MQ=255) gccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgggaacaccacactg < 2:993111‑M2/99‑98 (MQ=255) ccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgggaacaccacactgcc > 1:1670941‑M2/1‑1 (MQ=255) ccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgggaacaccacactgcc < 1:466535‑M2/100‑100 (MQ=255) ccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgggaacaccacactgcc < 2:1895256‑M2/100‑100 (MQ=255) ccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctgcaccagcaccggcgggaacaccacactgcc < 2:183133‑M2/100‑100 (MQ=255) ccagccagcggcggctttcctcactcacccggtcagccaggatttcactttccagccggtcgagcatctccaccagcaccggcggtaacaccacactg < 1:230383‑M2/98‑98 (MQ=255) cAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAgggg < 2:673317/100‑1 (MQ=11) cAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAgggg > 2:2244187/1‑100 (MQ=11) cAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAgggg > 1:573388/1‑100 (MQ=11) cAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCCCATCAGCACGGAAggg > 2:1113686/1‑99 (MQ=11) | AGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGG > NC_000913/3622481‑3622678 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |