New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4607047	70 (0.860)	7 (0.090)	6/168	NT	9.4%	coding (654/1032 nt)	rsmC	16S rRNA m(2)G1207 methyltransferase, SAM‑dependent
	?	NC_000913	= 4607088	69 (0.900)					coding (613/1032 nt)	rsmC	16S rRNA m(2)G1207 methyltransferase, SAM‑dependent
Rejected: Frequency below cutoff threshold.

CGCGGCTGGCTTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTACCGACATCCAGACCGTCGCGGCTAAACACGCCAGGC  >  NC_000913/4606989‑4607185                                                                                                    |                                                                                                  cgcgGCTGGCTTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCcaca                                                                                                   >  1:90287/1‑100 (MQ=255)   ctgctggcttcTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAgc                                                                                                 <  1:1513960‑M2/98‑3 (MQ=255)   cgGCTGGCTTCTACCGCCGGGGCATAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAgc                                                                                                 <  1:2222235‑M2/100‑3 (MQ=255)   cgGCTGGCTTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCAGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAgc                                                                                                 <  2:1368042‑M2/100‑3 (MQ=255)    ggctggctTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAgcc                                                                                                >  1:1069084‑M2/1‑97 (MQ=255)     gctggctTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAgccg                                                                                               >  1:1964279‑M2/1‑96 (MQ=255)     gctggctTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAgccg                                                                                               >  1:1021549‑M2/1‑96 (MQ=255)      ctggctTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAgccga                                                                                              >  2:1229719‑M2/1‑95 (MQ=255)       tggctTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGAc                                                                                             >  2:200026/1‑100 (MQ=255)       tggctTCTACCGCCGGGGCAGAGACATCGCACAAGGGGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGAc                                                                                             <  2:1372779/100‑1 (MQ=255)        ggctTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACa                                                                                            <  1:895287/100‑1 (MQ=255)        ggctTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACa                                                                                            <  1:2196082/100‑1 (MQ=255)          ctTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATc                                                                                          >  1:1615863/1‑100 (MQ=255)          ctTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATc                                                                                          >  1:310476/1‑100 (MQ=255)           ttttACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATcc                                                                                         <  2:800018/97‑1 (MQ=255)             cTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAg                                                                                       <  1:2143806/100‑1 (MQ=255)              tACCGCCGTGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCAAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGGCACAGCCGACATCCAGc                                                                                      <  2:1968410/100‑1 (MQ=255)                ccgccgGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCAc                                                                                    >  1:2150827/1‑100 (MQ=255)                 cgccgGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACt                                                                                   >  2:83678/1‑100 (MQ=255)                  gccgGGGCAGAGACATCGCACACGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACtt                                                                                  >  1:1213399/1‑100 (MQ=255)                      gggCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTAcc                                                                              >  1:656617/1‑100 (MQ=255)                      gggCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTAcc                                                                              <  1:1563074/100‑1 (MQ=255)                       ggCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCt                                                                             >  2:1846070/1‑100 (MQ=255)                        gCATAGACATCGCACAAAGTGAGACGCATTTTCGGCGAATGGCGCGCAAAGGCAACTGACAGCACGCCCGCGCCACAGCCGACATCCAGCAc                                                                                    <  2:2064004/92‑1 (MQ=255)                         cAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCttt                                                                           >  2:97087/1‑100 (MQ=255)                          agagACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTc                                                                          >  2:236859/1‑100 (MQ=255)                             gaCATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCgtg                                                                       >  1:1250881/1‑100 (MQ=255)                             gaCATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCgtg                                                                       <  2:1848422/100‑1 (MQ=255)                             gaCATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCgtg                                                                       <  1:1536758/100‑1 (MQ=255)                              aCATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGTAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCgtg                                                                       <  2:1452245/99‑1 (MQ=255)                               cATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCgtgt                                                                      >  1:967149/1‑99 (MQ=255)                               cATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGtgtg                                                                     >  1:2196666/1‑100 (MQ=255)                                aTCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGc                                                                    >  1:1263286/1‑100 (MQ=255)                                     acaAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGt                                                               <  2:817949/100‑1 (MQ=255)                                     acaAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGt                                                               <  1:1141411/100‑1 (MQ=255)                                       aaGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTa                                                             <  1:1650587/100‑1 (MQ=255)                                        aGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTaa                                                            >  2:991426/1‑100 (MQ=255)                                             agaCGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTACGGAGTTAACGTCg                                                       <  2:336327/100‑1 (MQ=255)                                              gaCGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCga                                                      <  2:90287/100‑1 (MQ=255)                                               aCGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCgag                                                     >  2:2037621/1‑100 (MQ=255)                                                cGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCgaga                                                    >  1:303647/1‑100 (MQ=255)                                                cGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCgaga                                                    <  1:1795323/100‑1 (MQ=255)                                                cGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCgag                                                     <  1:475466/99‑1 (MQ=255)                                                cGAATTTTCGGCGAATGGCGCGCAAAGACAACTGAAAGCACGCCCGCGCCACAgccgaaaattcgtctcaccttgtgcgatgtctctgccccggcggtag                                                    <  2:1104620‑M2/100‑48 (MQ=255)                                                 gAATTTTCGTCGAATTGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGagag                                                   <  1:2230455/100‑1 (MQ=255)                                                  aaTTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAgccgaaaattcgtctcaccttgtgcgatgtctctaccccggcggtagaa                                                  <  1:1891‑M2/100‑50 (MQ=255)                                                  aaTTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGagc                                                  <  1:677546/100‑1 (MQ=255)                                                   aTTTTCTGCGAATGGCGCGCAAAGGCAACAGAAAGCACGCCCGCGCCACAgccgaaaaatcgactcaccttgtgcgatgtctctgccccggcggtagaag                                                 <  2:856384‑M2/100‑51 (MQ=255)                                                   aTTTTCGGCGAATGGTAAACAAAGGCAACTAAAAGCATGCCCTCCCCACAGCAGACACACAGCACTTACACCTCCATGTGCAGAGTTAAAGTCaagacta                                                 >  2:1227058/1‑97 (MQ=255)                                                   aTTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGagca                                                 <  2:705782/100‑1 (MQ=255)                                                    ttttCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGagcag                                                <  1:832985/100‑1 (MQ=255)                                                     tttCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGagcagc                                               <  1:338254/100‑1 (MQ=255)                                                      ttCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAgccgaaaattcgtctcaccttgtgcgatgtctctgccccggcggtagaagcca                                              <  1:323107‑M2/100‑54 (MQ=255)                                                      ttCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAgcagca                                              <  1:784893/100‑1 (MQ=255)                                                       tCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCaa                                             <  1:2225036/100‑1 (MQ=255)                                                        cGGCTAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAAc                                            <  1:2123339/100‑1 (MQ=255)                                                        cGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAAc                                            >  2:1130946/1‑100 (MQ=255)                                                        cGGCGAATGGCGCGCAAAGGCAAATGAAAGCACGCCCGCGCCACAgccgaaaattcgtctaaccttgtgcgatgtctctgccccggcggtagaagccagc                                            <  2:1178771‑M2/100‑56 (MQ=255)                                                         ggCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAgccgaaaattcgtctcaccttgtgcgatgtctctgccccggcggtagaagccagcc                                           <  1:2038482‑M2/100‑57 (MQ=255)                                                         ggCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAgccgaaaattcgtctcaccttgtgcgatgtctctgccccggcggtagaagccagcc                                           <  1:1681887‑M2/100‑57 (MQ=255)                                                         ggCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACt                                           >  1:1546021/1‑100 (MQ=255)                                                         ggCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACt                                           >  2:748633/1‑100 (MQ=255)                                                           cGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTgg                                         <  2:713342/100‑1 (MQ=255)                                                            gAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGc                                        >  1:2236207/1‑100 (MQ=255)                                                            gAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAACCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGc                                        <  2:1540219/100‑1 (MQ=255)                                                                ggCGCGCAAAGGCAACTGAAAGCACGCGCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGCGTTAACGTCGACAGCAGCAACTGGCTAc                                     >  1:96623/1‑99 (MQ=255)                                                                ggCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTAcc                                    >  1:2023463/1‑100 (MQ=255)                                                                ggCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTAcc                                    >  1:1046641/1‑100 (MQ=255)                                                                    cgcAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTACCGACa                                >  2:1260276/1‑100 (MQ=255)                                                                        aaGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTACCGACATCCa                            <  2:2048096/100‑1 (MQ=255)                                                                          ggCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTACCGACATCCAGa                          >  1:1545397/1‑100 (MQ=255)                                                                          ggCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTCTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTACCGACATCCAGa                          >  2:1964127/1‑100 (MQ=255)                                                                            cAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTACCGACATCCAGAcc                        >  1:1282198/1‑100 (MQ=255)                                                                            cAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTACCGACATCCAGAcc                        >  1:1440857/1‑100 (MQ=255)                                                                              aCTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTACCGACATCCAGACCGt                      >  1:1444166/1‑100 (MQ=255)                                                                              aCTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTACCGACATCCAGACCGt                      <  1:1284245/100‑1 (MQ=255)                                                                              aCTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTACCGACATCCAGACCGt                      <  1:1284217/100‑1 (MQ=255)                                                                               cTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTACCGACATCCAGACCGTc                     >  1:1742283/1‑100 (MQ=255)                                                                               cTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTACCGACATCCAGACCGTc                     >  1:1454694/1‑100 (MQ=255)                                                                                tGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTACCGACATCCAGACCGTcg                    <  2:523292/100‑1 (MQ=255)                                                                                 naaaGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTACCGACATCCAGACCGTcgc                   >  2:2036726/2‑100 (MQ=255)                                                                                 gAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTACCGACATCCAGACCGTcgc                   >  2:1165320/1‑100 (MQ=255)                                                                                    aGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAACAGCAACTGGCTACCGACATCCAAACCGTCGCGGc                >  2:676563/1‑100 (MQ=255)                                                                                        cGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTACCGACATCCAGACCGTCGCGGCTaaa            >  1:1320757/1‑100 (MQ=255)                                                                                        cGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTACCGACATCCAGACCGTCGCGGCTaaa            >  2:1780974/1‑100 (MQ=255)                                                                                        cGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTACCGACATCCAGACCGTCGCGGCTaaa            >  2:559601/1‑100 (MQ=255)                                                                                         gCCCGCGCCACAGCCGACATCCAGCACGTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTACCGACATCCAGACCGTCGCGGCTAAac           <  1:864353/100‑1 (MQ=255)                                                                                          cccGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTACCGACATCCAGACCGTCGCGGCTAAaca          >  1:1320438/1‑100 (MQ=255)                                                                                           ccGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTACCGACATCCAGACCGTCGCGGCTAAacac         <  2:2064410/100‑1 (MQ=255)                                                                                            cgcgCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTACCGACATCCAGACCGTCGCGGCTAAacac         >  2:1686028/1‑99 (MQ=255)                                                                                              cgcCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTACCGACATCCAGACCGTCGCGGCTAAACACGcc      <  1:880114/100‑1 (MQ=255)                                                                                                 cacaCCCGACATCCAGCAATTAACCTTACGTGCGCGGAGTTAACGTCGAGACCAGCAACTGGCTATCGACATACAGACCGTCGTCGCTAAACACGcc      >  2:244896/1‑97 (MQ=255)                                                                                                  acaGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTACCGACATCCAGACCGTCGCGGCTAAACACGCCAGGc  <  2:1320751/100‑1 (MQ=255)                                                                                                  acaGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTACCGACATCCAGACCGTCGCGGCTAAACACGCCAGGc  >  1:1744523/1‑100 (MQ=255)                                                                                                    |                                                                                                  CGCGGCTGGCTTCTACCGCCGGGGCAGAGACATCGCACAAGGTGAGACGAATTTTCGGCGAATGGCGCGCAAAGGCAACTGAAAGCACGCCCGCGCCACAGCCGACATCCAGCACTTTACCTTTCGTGTGCGGAGTTAACGTCGAGAGCAGCAACTGGCTACCGACATCCAGACCGTCGCGGCTAAACACGCCAGGC  >  NC_000913/4606989‑4607185

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.