New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 361887 =NA (NA)4 (0.050) 3/164 NT NA noncoding (5/34 nt) REP30 (repetitive extragenic palindromic) element; contains 1 REP sequences REP30 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 361917 = NA (NA)intergenic (‑57/+9) lacA/lacY thiogalactoside acetyltransferase/lactose permease

Only 100 of 118 total aligned reads displayed.

ATAGCTTGCCTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAATTAAGGTGAAGCCCAGCGCC  >  NC_000913/361818‑362016
                                                                                                   |                                                                                                   
aTAGCTTGCCTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACa                                                                                                     <  1:786608/100‑1 (MQ=255)
 cgcttagcggccccggcccgctttccctgctgcgtcgtcaggtgaatgaagtcgcttaagcaatcaatGTCGGATAAGGCGCTCGCGCCGCATCCGACat                                                                                                    >  1:991305‑M1/69‑100 (MQ=255)
   gCTTGCCTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACattg                                                                                                  >  1:1181695/1‑100 (MQ=255)
    cTTGCCTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCAGCATCCGACattga                                                                                                 >  2:1899962/1‑100 (MQ=255)
      agcggccccggcccgctttccctgctgcgtcgtcaggtgaatgaagtcgcttaagcaatcaatGTCGGATAAGGCGCTCGCGCCGCATCCGACattgatt                                                                                               >  1:1049618‑M1/64‑100 (MQ=255)
       gCCTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAATGCGCTCGCGCCGCATCCGACattgattg                                                                                              >  1:756882/1‑100 (MQ=255)
          tGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACattgattg                                                                                              <  1:670379/97‑1 (MQ=255)
          tGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCtt                                                                                           <  1:698231/100‑1 (MQ=255)
           gCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTa                                                                                          <  1:1835413/100‑1 (MQ=255)
              ctTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGc                                                                                       >  1:959455/1‑100 (MQ=255)
              ctTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGc                                                                                       <  2:436235/100‑1 (MQ=255)
                tATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGa                                                                                     <  2:866262/100‑1 (MQ=255)
                 aTTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGAc                                                                                    >  1:1484740/1‑100 (MQ=255)
                    cTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACttc                                                                                 >  1:892655/1‑100 (MQ=255)
                    cTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACttc                                                                                 <  1:2113257/100‑1 (MQ=255)
                     tttCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACttca                                                                                <  1:1837560/100‑1 (MQ=255)
                       tCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACttcatt                                                                              <  1:785715/100‑1 (MQ=255)
                         ggTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCTGCATCGGACATTGATTGCTTAAGCGACttcattc                                                                             >  1:1819355/1‑99 (MQ=255)
                           tCATTGGCATGTTCAATTCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCAcc                                                                          <  2:210599/100‑1 (MQ=255)
                           tCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCAcc                                                                          <  1:117919/100‑1 (MQ=255)
                           tCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCAcc                                                                          <  1:2212227/100‑1 (MQ=255)
                           cgcttttggtGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCAcc                                                                          <  2:1597360/91‑1 (MQ=255)
                            cATTGGCATGTTCAATGCGATCACTCCGTTATGAGATGTTGGTCGGATAAGGCGCTCGCGCCGTATCCGACATTGATTGCTTAAGCGACTTCATTCACCt                                                                         >  1:2137887/1‑100 (MQ=255)
                               tGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTgac                                                                      <  1:1613767/100‑1 (MQ=255)
                               tGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTgac                                                                      >  2:2220225/1‑100 (MQ=255)
                                ggCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTgacg                                                                     <  1:450541/100‑1 (MQ=255)
                                  cATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTgacgac                                                                   <  2:515918/100‑1 (MQ=255)
                                    tGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGAAGACgc                                                                 >  1:612984/1‑100 (MQ=255)
                                     gTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACgca                                                                <  1:1052976/100‑1 (MQ=255)
                                      ttCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACgcag                                                               >  1:483671/1‑100 (MQ=255)
                                      tgcAATGCGATCAGTCCGTTATGATATGTTGATCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACgca                                                                >  1:1510602/3‑99 (MQ=255)
                                       tCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGAAATTGATTGCTTAAGCGACTTCATTCACCTGacgacg                                                                  >  2:33429/1‑96 (MQ=255)
                                        cAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACgcagca                                                             <  1:850758/100‑1 (MQ=255)
                                        cAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACgcagca                                                             >  1:207538/1‑100 (MQ=255)
                                           tGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAggg                                                          <  2:1345758/100‑1 (MQ=255)
                                           tGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAggg                                                          <  1:552444/100‑1 (MQ=255)
                                            gCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGa                                                         >  1:1004614/1‑100 (MQ=255)
                                              gATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGaaa                                                       >  1:237112/1‑100 (MQ=255)
                                                tCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAACAGGGAAAGc                                                     >  1:2106181/1‑100 (MQ=255)
                                                 cACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCg                                                    <  2:2250044/100‑1 (MQ=255)
                                                 cACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCg                                                    <  2:2106167/100‑1 (MQ=255)
                                                 cACTCCGTTATGATATGTTAGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCg                                                    >  2:793377/1‑100 (MQ=255)
                                                  aCTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCg                                                    >  1:1918632/1‑99 (MQ=255)
                                                   cTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCggg                                                  <  1:2118875/100‑1 (MQ=255)
                                                    tCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCgggc                                                 <  2:767147/100‑1 (MQ=255)
                                                    tCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCgggc                                                 <  1:1676620/100‑1 (MQ=255)
                                                    tCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCgggc                                                 <  1:2138836/100‑1 (MQ=255)
                                                      cGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCgggccg                                               >  1:773766/1‑100 (MQ=255)
                                                         tctGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCgggccgggg                                            <  2:1358128/98‑1 (MQ=255)
                                                         tATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCgggccgggg                                            <  2:1982584/100‑1 (MQ=255)
                                                         tATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCgggccgggg                                            <  1:127560/100‑1 (MQ=255)
                                                         tATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCgggccgggg                                            <  2:1982683/100‑1 (MQ=255)
                                                          aTGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCgggccggggc                                           <  1:1573790/100‑1 (MQ=255)
                                                          aTGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCgggccggggc                                           >  1:1644064/1‑100 (MQ=255)
                                                          aTGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCgggccggggc                                           >  1:2191049/1‑100 (MQ=255)
                                                           tGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCgggccggggcc                                          <  1:1462588/100‑1 (MQ=255)
                                                           tGATATGTTGGTCGGATAAGGCGCTCGCGCCGCAGCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGTgggacggggcc                                          <  2:1172840/100‑1 (MQ=255)
                                                            gATATGTTGGTCGGATACGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGAGTTCATTCACCTGACGACGCAGCAGGGAAAGCggggcggggcc                                          <  2:1710421/99‑1 (MQ=255)
                                                            gATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCgggccggggccg                                         >  1:1145037/1‑100 (MQ=255)
                                                            gATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCgggccggggcc                                          <  2:1710435/99‑1 (MQ=255)
                                                            gATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCggaccagg                                             >  1:585511/1‑96 (MQ=255)
                                                              tatGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCt                                       <  1:1390429/100‑1 (MQ=255)
                                                              aatcaatgtcggatgcggcgcgagcgccttatccgacATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCt                                       >  1:858065‑M2/38‑100 (MQ=255)
                                                              aatcaatgtcggatgcggcgcgagcgccttatccgacATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCt                                       >  1:1049618‑M2/38‑100 (MQ=255)
                                                                tGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTaa                                     >  1:2095253/1‑100 (MQ=255)
                                                                 gTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTaa                                     >  2:1861489/1‑99 (MQ=255)
                                                                   tGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCg                                  >  1:820552/1‑100 (MQ=255)
                                                                   tGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGCCCCGGCCCGCtttccc                                  <  2:248623/100‑6 (MQ=38)
                                                                   tGGTCGGATAAGGCGCACGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGc                                   >  2:1216991/1‑99 (MQ=255)
                                                                   tGGTCAGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACTCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCg                                  <  1:854058/100‑1 (MQ=255)
                                                                   atgtcggatgcggcgcgagcgccttatccgacATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCg                                  >  1:991305‑M2/33‑100 (MQ=255)
                                                                    ggTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGCCCCGGCCCGCtttccct                                 <  1:971577/100‑7 (MQ=38)
                                                                     gtcggatgcggcgcgagcgccttatccgacATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTg                                >  1:1007438‑M2/31‑100 (MQ=255)
                                                                     gTCGGATGCGGCGCGAGCGCCTTAACCGACATTGATTGCTTAAGCGACTTCATTCACCTCAAGACGCATCATGAAAATCGAGCCGGAGCAGCTAAGcca                                 >  2:2125039/1‑97 (MQ=12)
                                                                     GTCGGATAGGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAATGCGGGCCGGGGCCGCTAAGCGTg                                >  2:423212‑M1/1‑100 (MQ=255)
                                                                     GTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGt                                 <  1:41276‑M1/99‑1 (MQ=255)
                                                                     GTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTg                                >  2:608668‑M1/1‑100 (MQ=255)
                                                                     GTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTg                                <  1:828111‑M1/100‑1 (MQ=255)
                                                                      TCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCCGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGa                               >  2:2044347‑M1/1‑100 (MQ=255)
                                                                           TAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACg                          <  2:1810392‑M1/100‑1 (MQ=255)
                                                                             aGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGa                        <  1:828155/100‑1 (MQ=255)
                                                                              ggCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGaa                       >  2:812404/1‑100 (MQ=255)
                                                                              ggCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGaa                       >  1:850497/1‑100 (MQ=255)
                                                                                cgcTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGaaa                      >  2:1813655/1‑99 (MQ=255)
                                                                                cgcTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAAt                     <  2:467283/100‑1 (MQ=255)
                                                                                  cTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGTCCGGGGCCGCTAAGCGTGAACACGGAAAtt                    <  2:802109/99‑1 (MQ=255)
                                                                                  cTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAAtt                    <  1:1336170/99‑1 (MQ=255)
                                                                                    cgggccgcATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAATTa                   >  2:744153/4‑98 (MQ=255)
                                                                                     gcgcCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAATTAAgg                <  1:1060045/100‑1 (MQ=255)
                                                                                      cgccgcATCCGACATTGATTGCCTAAGCGACTTCATTTACCTGACGATGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAATTAAGGt               <  2:1510592/100‑1 (MQ=255)
                                                                                       gccgcATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGCCGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAATTAAGGTg              >  2:618066/1‑100 (MQ=255)
                                                                                       gccgcATCCGACATTAATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAATTAAGGTg              <  1:2213442/100‑1 (MQ=255)
                                                                                         cgcATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAATTAAGGTGaa            <  1:31127/100‑1 (MQ=255)
                                                                                          gcATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAATTAAGGTGaa            <  1:31540/99‑1 (MQ=255)
                                                                                           cATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAATTAAGGTGAAGc          <  2:809332/100‑1 (MQ=255)
                                                                                             tccgacATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAATTAAGGTGAAGccc        <  1:199995‑M2/94‑1 (MQ=255)
                                                                                               cgacATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAATTAAGGTGAAGCCCa       >  2:805347‑M2/5‑99 (MQ=255)
                                                                                               cgacATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAATTAAGGTGAAGCCCa       >  2:319379‑M2/5‑99 (MQ=255)
                                                                                                 acATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAATTAAGGTGAAGCCCAgcg    <  2:1980920‑M2/98‑1 (MQ=255)
                                                                                                   attgattgCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAATTAAGGTGAAGCCCAGCGcc  <  1:2220240/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
ATAGCTTGCCTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAATTAAGGTGAAGCCCAGCGCC  >  NC_000913/361818‑362016

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.